Literature DB >> 21605713

Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants.

Basel Khraiwesh1, Jian-Kang Zhu, Jianhua Zhu.   

Abstract

Small, non-coding RNAs are a distinct class of regulatory RNAs in plants and animals that control a variety of biological processes. In plants, several classes of small RNAs with specific sizes and dedicated functions have evolved through a series of pathways. The major classes of small RNAs include microRNAs (miRNAs) and small interfering RNAs (siRNAs), which differ in their biogenesis. miRNAs control the expression of cognate target genes by binding to reverse complementary sequences, resulting in cleavage or translational inhibition of the target RNAs. siRNAs have a similar structure, function, and biogenesis as miRNAs but are derived from long double-stranded RNAs and can often direct DNA methylation at target sequences. Besides their roles in growth and development and maintenance of genome integrity, small RNAs are also important components in plant stress responses. One way in which plants respond to environmental stress is by modifying their gene expression through the activity of small RNAs. Thus, understanding how small RNAs regulate gene expression will enable researchers to explore the role of small RNAs in biotic and abiotic stress responses. This review focuses on the regulatory roles of plant small RNAs in the adaptive response to stresses. This article is part of a Special Issue entitled: Plant gene regulation in response to abiotic stress.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21605713      PMCID: PMC3175014          DOI: 10.1016/j.bbagrm.2011.05.001

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  138 in total

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Journal:  Curr Biol       Date:  2003-10-14       Impact factor: 10.834

2.  MicroRNA genes are transcribed by RNA polymerase II.

Authors:  Yoontae Lee; Minju Kim; Jinju Han; Kyu-Hyun Yeom; Sanghyuk Lee; Sung Hee Baek; V Narry Kim
Journal:  EMBO J       Date:  2004-09-16       Impact factor: 11.598

Review 3.  Small RNAs as big players in plant abiotic stress responses and nutrient deprivation.

Authors:  Ramanjulu Sunkar; Viswanathan Chinnusamy; Jianhua Zhu; Jian-Kang Zhu
Journal:  Trends Plant Sci       Date:  2007-06-18       Impact factor: 18.313

Review 4.  Mechanisms of salinity tolerance.

Authors:  Rana Munns; Mark Tester
Journal:  Annu Rev Plant Biol       Date:  2008       Impact factor: 26.379

Review 5.  Roles of plant small RNAs in biotic stress responses.

Authors:  Virginia Ruiz-Ferrer; Olivier Voinnet
Journal:  Annu Rev Plant Biol       Date:  2009       Impact factor: 26.379

6.  Non-coding small RNAs responsive to abiotic stress in wheat (Triticum aestivum L.).

Authors:  Yingyin Yao; Zhongfu Ni; Huiru Peng; Fenglong Sun; Mingming Xin; Ramanjulu Sunkar; Jian-Kang Zhu; Qixin Sun
Journal:  Funct Integr Genomics       Date:  2010-03-09       Impact factor: 3.410

7.  Regulation of sulfur assimilation in higher plants: a sulfate transporter induced in sulfate-starved roots plays a central role in Arabidopsis thaliana.

Authors:  H Takahashi; M Yamazaki; N Sasakura; A Watanabe; T Leustek; J A Engler; G Engler; M Van Montagu; K Saito
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-30       Impact factor: 11.205

8.  A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae.

Authors:  V Rubio; F Linhares; R Solano; A C Martín; J Iglesias; A Leyva; J Paz-Ares
Journal:  Genes Dev       Date:  2001-08-15       Impact factor: 11.361

9.  Submergence-responsive MicroRNAs are potentially involved in the regulation of morphological and metabolic adaptations in maize root cells.

Authors:  Zuxin Zhang; Liya Wei; Xilin Zou; Yongsheng Tao; Zhijie Liu; Yonglian Zheng
Journal:  Ann Bot       Date:  2008-07-31       Impact factor: 4.357

10.  Identification of iron-deficiency responsive microRNA genes and cis-elements in Arabidopsis.

Authors:  Wei Wei Kong; Zhi Min Yang
Journal:  Plant Physiol Biochem       Date:  2010-01-11       Impact factor: 4.270

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  317 in total

1.  Differential profiling analysis of miRNAs reveals a regulatory role in low N stress response of Populus.

Authors:  Yuanyuan Ren; Fengshuo Sun; Jia Hou; Lei Chen; Yiyun Zhang; Xiangyang Kang; Yanwei Wang
Journal:  Funct Integr Genomics       Date:  2014-11-16       Impact factor: 3.410

2.  Difference in miRNA expression profiles between two cotton cultivars with distinct salt sensitivity.

Authors:  Zujun Yin; Yan Li; Jiwen Yu; Yudong Liu; Chunhe Li; Xiulan Han; Fafu Shen
Journal:  Mol Biol Rep       Date:  2011-12-08       Impact factor: 2.316

3.  Subgenomic analysis of microRNAs in polyploid wheat.

Authors:  Melda Kantar; Bala Anı Akpınar; Miroslav Valárik; Stuart J Lucas; Jaroslav Doležel; Pilar Hernández; Hikmet Budak
Journal:  Funct Integr Genomics       Date:  2012-05-17       Impact factor: 3.410

4.  Downregulation of CSD2 by a heat-inducible miR398 is required for thermotolerance in Arabidopsis.

Authors:  Xiaoyan Lu; Qingmei Guan; Jianhua Zhu
Journal:  Plant Signal Behav       Date:  2013-05-15

Review 5.  Role of chromatin in water stress responses in plants.

Authors:  Soon-Ki Han; Doris Wagner
Journal:  J Exp Bot       Date:  2013-12-03       Impact factor: 6.992

6.  Arabidopsis miR156 Regulates Tolerance to Recurring Environmental Stress through SPL Transcription Factors.

Authors:  Anna Stief; Simone Altmann; Karen Hoffmann; Bikram Datt Pant; Wolf-Rüdiger Scheible; Isabel Bäurle
Journal:  Plant Cell       Date:  2014-04-25       Impact factor: 11.277

7.  Characterization and expression patterns of small RNAs in synthesized Brassica hexaploids.

Authors:  Yanyue Shen; Qin Zhao; Jun Zou; Wenliang Wang; Yi Gao; Jinling Meng; Jianbo Wang
Journal:  Plant Mol Biol       Date:  2014-03-02       Impact factor: 4.076

8.  Magnaporthe oryzae Induces the Expression of a MicroRNA to Suppress the Immune Response in Rice.

Authors:  Xin Zhang; Yalin Bao; Deqi Shan; Zhihui Wang; Xiaoning Song; Zhaoyun Wang; Jiansheng Wang; Liqiang He; Liang Wu; Zhengguang Zhang; Dongdong Niu; Hailing Jin; Hongwei Zhao
Journal:  Plant Physiol       Date:  2018-03-16       Impact factor: 8.340

9.  High-throughput sequencing of small RNAs revealed the diversified cold-responsive pathways during cold stress in the wild banana (Musa itinerans).

Authors:  Weihua Liu; Chunzhen Cheng; Fanglan Chen; Shanshan Ni; Yuling Lin; Zhongxiong Lai
Journal:  BMC Plant Biol       Date:  2018-11-29       Impact factor: 4.215

10.  A significant fraction of 21-nucleotide small RNA originates from phased degradation of resistance genes in several perennial species.

Authors:  Thomas Källman; Jun Chen; Niclas Gyllenstrand; Ulf Lagercrantz
Journal:  Plant Physiol       Date:  2013-04-11       Impact factor: 8.340

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