Literature DB >> 24447268

Molecular logic gates on DNA origami nanostructures for microRNA diagnostics.

Dongfang Wang1, Yanming Fu, Juan Yan, Bin Zhao, Bin Dai, Jie Chao, Huajie Liu, Dannong He, Yi Zhang, Chunhai Fan, Shiping Song.   

Abstract

Molecular computing holds great promise for diagnosis and treatment of diseases at the molecular level; nevertheless, designing molecular logic gates to operate programmably and autonomously for molecular diagnostics still remains challenging. We designed logic gates on DNA Origami for microRNA analysis. As a demonstration, two indicators of heart failure, microRNA-21 and microRNA-195, were selected as the logic inputs. The logic gates contain two main modules: computation module and output module, performing in a single DNA Origami nanostructure. The computation module recognizes disease indicators, while the output module display different nanoscale symbols, "+" (positive) or "-" (negative), depending on the computing results. We demonstrated that the molecular logic gates worked well with single and two input combinations.

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Year:  2014        PMID: 24447268     DOI: 10.1021/ac403661z

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  17 in total

Review 1.  DNA Origami: Folded DNA-Nanodevices That Can Direct and Interpret Cell Behavior.

Authors:  Cathal J Kearney; Christopher R Lucas; Fergal J O'Brien; Carlos E Castro
Journal:  Adv Mater       Date:  2016-02-03       Impact factor: 30.849

2.  Triggering nucleic acid nanostructure assembly by conditional kissing interactions.

Authors:  Laurent Azéma; Servane Bonnet-Salomon; Masayuki Endo; Yosuke Takeuchi; Guillaume Durand; Tomoko Emura; Kumi Hidaka; Eric Dausse; Hiroshi Sugiyama; Jean-Jacques Toulmé
Journal:  Nucleic Acids Res       Date:  2018-02-16       Impact factor: 16.971

3.  Bridging the Two Worlds: A Universal Interface between Enzymatic and DNA Computing Systems.

Authors:  Shay Mailloux; Yulia V Gerasimova; Nataliia Guz; Dmitry M Kolpashchikov; Evgeny Katz
Journal:  Angew Chem Int Ed Engl       Date:  2015-04-09       Impact factor: 15.336

4.  High-Force Application by a Nanoscale DNA Force Spectrometer.

Authors:  Michael Darcy; Kyle Crocker; Yuchen Wang; Jenny V Le; Golbarg Mohammadiroozbahani; Mahmoud A S Abdelhamid; Timothy D Craggs; Carlos E Castro; Ralf Bundschuh; Michael G Poirier
Journal:  ACS Nano       Date:  2022-04-06       Impact factor: 18.027

5.  Engineering Cell Surface Function with DNA Origami.

Authors:  Ehsan Akbari; Molly Y Mollica; Christopher R Lucas; Sarah M Bushman; Randy A Patton; Melika Shahhosseini; Jonathan W Song; Carlos E Castro
Journal:  Adv Mater       Date:  2017-10-13       Impact factor: 30.849

6.  First principle approach towards logic design using hydrogen-doped single-strand DNA.

Authors:  Pradipta Roy; Debarati Dey; Debashis De
Journal:  IET Nanobiotechnol       Date:  2019-02       Impact factor: 1.847

7.  Analytical design of multi-threshold and high fan-in DNA-based logical sensors to profile the pattern of MS microRNAs.

Authors:  Mercedeh Sanjabi; Ali Jahanian
Journal:  Biomed Eng Lett       Date:  2021-05-11

Review 8.  The Growing Development of DNA Nanostructures for Potential Healthcare-Related Applications.

Authors:  Divita Mathur; Igor L Medintz
Journal:  Adv Healthc Mater       Date:  2019-03-07       Impact factor: 11.092

Review 9.  Biosensors with built-in biomolecular logic gates for practical applications.

Authors:  Yu-Hsuan Lai; Sin-Cih Sun; Min-Chieh Chuang
Journal:  Biosensors (Basel)       Date:  2014-08-27

Review 10.  Nano-Synthetic Devices in Leishmaniasis: A Bioinformatics Approach.

Authors:  Milsee Mol; Dipali Kosey; Shailza Singh
Journal:  Front Immunol       Date:  2015-06-19       Impact factor: 7.561

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