Literature DB >> 24443704

Beyond the Protein Matrix: Probing Cofactor Variants in a Baeyer-Villiger Oxygenation Reaction.

Christian Martinoli1, Hanna M Dudek2, Roberto Orru1, Dale E Edmondson3, Marco W Fraaije2, Andrea Mattevi1.   

Abstract

A general question in biochemistry is the interplay between the chemical properties of cofactors and the surrounding protein matrix. Here, the functions of NADP+ and FAD are explored by investigation of a representative monooxygenase reconstituted with chemically-modified cofactor analogues. Like pieces of a jigsaw puzzle, the enzyme active site juxtaposes the flavin and nicotinamide rings, harnessing their H-bonding and steric properties to finely construct an oxygen-reacting center that restrains the flavin-peroxide intermediate in a catalytically-competent orientation. Strikingly, the regio- and stereoselectivities of the reaction are essentially unaffected by cofactor modifications. These observations indicate a remarkable robustness of this complex multi-cofactor active site, which has implications for enzyme design based on cofactor engineering approaches.

Entities:  

Keywords:  biocatalysis; cofactors; flavin; monooxygenation; nicotinamide

Year:  2013        PMID: 24443704      PMCID: PMC3893305          DOI: 10.1021/cs400837z

Source DB:  PubMed          Journal:  ACS Catal            Impact factor:   13.084


  31 in total

1.  Reaction of pyridine nucleotide analogues with dehydrogenases.

Authors:  M M CIOTTI; N O KAPLAN; F E STOLZENBACH
Journal:  J Biol Chem       Date:  1956-08       Impact factor: 5.157

Review 2.  Recent developments in the application of Baeyer-Villiger monooxygenases as biocatalysts.

Authors:  Gonzalo de Gonzalo; Marko D Mihovilovic; Marco W Fraaije
Journal:  Chembiochem       Date:  2010-11-02       Impact factor: 3.164

3.  Mapping the substrate binding site of phenylacetone monooxygenase from Thermobifida fusca by mutational analysis.

Authors:  Hanna M Dudek; Gonzalo de Gonzalo; Daniel E Torres Pazmiño; Piotr Stepniak; Lucjan S Wyrwicz; Leszek Rychlewski; Marco W Fraaije
Journal:  Appl Environ Microbiol       Date:  2011-07-01       Impact factor: 4.792

4.  Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-Δ(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.

Authors:  Hannes Leisch; Rong Shi; Stephan Grosse; Krista Morley; Hélène Bergeron; Miroslaw Cygler; Hiroaki Iwaki; Yoshie Hasegawa; Peter C K Lau
Journal:  Appl Environ Microbiol       Date:  2012-01-20       Impact factor: 4.792

5.  Mechanistic studies of cyclohexanone monooxygenase: chemical properties of intermediates involved in catalysis.

Authors:  D Sheng; D P Ballou; V Massey
Journal:  Biochemistry       Date:  2001-09-18       Impact factor: 3.162

6.  Exploring the structural basis of substrate preferences in Baeyer-Villiger monooxygenases: insight from steroid monooxygenase.

Authors:  Stefano Franceschini; Hugo L van Beek; Alessandra Pennetta; Christian Martinoli; Marco W Fraaije; Andrea Mattevi
Journal:  J Biol Chem       Date:  2012-05-17       Impact factor: 5.157

7.  Crystal structures of cyclohexanone monooxygenase reveal complex domain movements and a sliding cofactor.

Authors:  I Ahmad Mirza; Brahm J Yachnin; Shaozhao Wang; Stephan Grosse; Hélène Bergeron; Akihiro Imura; Hiroaki Iwaki; Yoshie Hasegawa; Peter C K Lau; Albert M Berghuis
Journal:  J Am Chem Soc       Date:  2009-07-01       Impact factor: 15.419

8.  Analysis of the active site of the flavoprotein p-hydroxybenzoate hydroxylase and some ideas with respect to its reaction mechanism.

Authors:  H A Schreuder; W G Hol; J Drenth
Journal:  Biochemistry       Date:  1990-03-27       Impact factor: 3.162

9.  Revealing the moonlighting role of NADP in the structure of a flavin-containing monooxygenase.

Authors:  Andrea Alfieri; Enrico Malito; Roberto Orru; Marco W Fraaije; Andrea Mattevi
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-28       Impact factor: 11.205

10.  Kinetic mechanism of phenylacetone monooxygenase from Thermobifida fusca.

Authors:  Daniel E Torres Pazmiño; Bert-Jan Baas; Dick B Janssen; Marco W Fraaije
Journal:  Biochemistry       Date:  2008-03-06       Impact factor: 3.162

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  2 in total

1.  Substitution of a Single Amino Acid Reverses the Regiospecificity of the Baeyer-Villiger Monooxygenase PntE in the Biosynthesis of the Antibiotic Pentalenolactone.

Authors:  Ke Chen; Shiwen Wu; Lu Zhu; Chengde Zhang; Wensheng Xiang; Zixin Deng; Haruo Ikeda; David E Cane; Dongqing Zhu
Journal:  Biochemistry       Date:  2016-11-23       Impact factor: 3.162

Review 2.  The Hitchhiker's guide to biocatalysis: recent advances in the use of enzymes in organic synthesis.

Authors:  Roger A Sheldon; Dean Brady; Moira L Bode
Journal:  Chem Sci       Date:  2020-02-13       Impact factor: 9.825

  2 in total

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