Literature DB >> 22267661

Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-Δ(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.

Hannes Leisch1, Rong Shi, Stephan Grosse, Krista Morley, Hélène Bergeron, Miroslaw Cygler, Hiroaki Iwaki, Yoshie Hasegawa, Peter C K Lau.   

Abstract

A dimeric Baeyer-Villiger monooxygenase (BVMO) catalyzing the lactonization of 2-oxo-Δ(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A (CoA), a key intermediate in the metabolism of camphor by Pseudomonas putida ATCC 17453, had been initially characterized in 1983 by Ougham and coworkers (H. J. Ougham, D. G. Taylor, and P. W. Trudgill, J. Bacteriol. 153:140-152, 1983). Here we cloned and overexpressed the 2-oxo-Δ(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase (OTEMO) in Escherichia coli and determined its three-dimensional structure with bound flavin adenine dinucleotide (FAD) at a 1.95-Å resolution as well as with bound FAD and NADP(+) at a 2.0-Å resolution. OTEMO represents the first homodimeric type 1 BVMO structure bound to FAD/NADP(+). A comparison of several crystal forms of OTEMO bound to FAD and NADP(+) revealed a conformational plasticity of several loop regions, some of which have been implicated in contributing to the substrate specificity profile of structurally related BVMOs. Substrate specificity studies confirmed that the 2-oxo-Δ(3)-4,5,5-trimethylcyclopentenylacetic acid coenzyme A ester is preferred over the free acid. However, the catalytic efficiency (k(cat)/K(m)) favors 2-n-hexyl cyclopentanone (4.3 × 10(5) M(-1) s(-1)) as a substrate, although its affinity (K(m) = 32 μM) was lower than that of the CoA-activated substrate (K(m) = 18 μM). In whole-cell biotransformation experiments, OTEMO showed a unique enantiocomplementarity to the action of the prototypical cyclohexanone monooxygenase (CHMO) and appeared to be particularly useful for the oxidation of 4-substituted cyclohexanones. Overall, this work extends our understanding of the molecular structure and mechanistic complexity of the type 1 family of BVMOs and expands the catalytic repertoire of one of its original members.

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Year:  2012        PMID: 22267661      PMCID: PMC3302634          DOI: 10.1128/AEM.07694-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  43 in total

1.  The Protein Data Bank.

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Review 2.  Recent developments in the application of Baeyer-Villiger monooxygenases as biocatalysts.

Authors:  Gonzalo de Gonzalo; Marko D Mihovilovic; Marco W Fraaije
Journal:  Chembiochem       Date:  2010-11-02       Impact factor: 3.164

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4.  Mechanistic studies of cyclohexanone monooxygenase: chemical properties of intermediates involved in catalysis.

Authors:  D Sheng; D P Ballou; V Massey
Journal:  Biochemistry       Date:  2001-09-18       Impact factor: 3.162

5.  The synthesis of (R)-(+)-lipoic acid using a monooxygenase-catalysed biotransformation as the key step.

Authors:  B Adger; M T Bes; G Grogan; R McCague; S Pedragosa-Moreau; S M Roberts; R Villa; P W Wan; A J Willetts
Journal:  Bioorg Med Chem       Date:  1997-02       Impact factor: 3.641

6.  Crystal structures of cyclohexanone monooxygenase reveal complex domain movements and a sliding cofactor.

Authors:  I Ahmad Mirza; Brahm J Yachnin; Shaozhao Wang; Stephan Grosse; Hélène Bergeron; Akihiro Imura; Hiroaki Iwaki; Yoshie Hasegawa; Peter C K Lau; Albert M Berghuis
Journal:  J Am Chem Soc       Date:  2009-07-01       Impact factor: 15.419

7.  Structural influence of cation binding to recombinant human brain S100b: evidence for calcium-induced exposure of a hydrophobic surface.

Authors:  S P Smith; K R Barber; S D Dunn; G S Shaw
Journal:  Biochemistry       Date:  1996-07-09       Impact factor: 3.162

8.  Crystal structure of Baeyer-Villiger monooxygenase MtmOIV, the key enzyme of the mithramycin biosynthetic pathway .

Authors:  Miranda P Beam; Mary A Bosserman; Nicholas Noinaj; Marie Wehenkel; Jürgen Rohr
Journal:  Biochemistry       Date:  2009-06-02       Impact factor: 3.162

9.  Kinetic mechanism of phenylacetone monooxygenase from Thermobifida fusca.

Authors:  Daniel E Torres Pazmiño; Bert-Jan Baas; Dick B Janssen; Marco W Fraaije
Journal:  Biochemistry       Date:  2008-03-06       Impact factor: 3.162

10.  Multiple pathways guide oxygen diffusion into flavoenzyme active sites.

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-16       Impact factor: 11.205

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  20 in total

1.  Molecular insight into substrate recognition and catalysis of Baeyer-Villiger monooxygenase MtmOIV, the key frame-modifying enzyme in the biosynthesis of anticancer agent mithramycin.

Authors:  Mary A Bosserman; Theresa Downey; Nicholas Noinaj; Susan K Buchanan; Jürgen Rohr
Journal:  ACS Chem Biol       Date:  2013-09-13       Impact factor: 5.100

2.  Beyond the Protein Matrix: Probing Cofactor Variants in a Baeyer-Villiger Oxygenation Reaction.

Authors:  Christian Martinoli; Hanna M Dudek; Roberto Orru; Dale E Edmondson; Marco W Fraaije; Andrea Mattevi
Journal:  ACS Catal       Date:  2013       Impact factor: 13.084

3.  Exploring the structural basis of substrate preferences in Baeyer-Villiger monooxygenases: insight from steroid monooxygenase.

Authors:  Stefano Franceschini; Hugo L van Beek; Alessandra Pennetta; Christian Martinoli; Marco W Fraaije; Andrea Mattevi
Journal:  J Biol Chem       Date:  2012-05-17       Impact factor: 5.157

4.  Substitution of a Single Amino Acid Reverses the Regiospecificity of the Baeyer-Villiger Monooxygenase PntE in the Biosynthesis of the Antibiotic Pentalenolactone.

Authors:  Ke Chen; Shiwen Wu; Lu Zhu; Chengde Zhang; Wensheng Xiang; Zixin Deng; Haruo Ikeda; David E Cane; Dongqing Zhu
Journal:  Biochemistry       Date:  2016-11-23       Impact factor: 3.162

5.  Discovery of Two Native Baeyer-Villiger Monooxygenases for Asymmetric Synthesis of Bulky Chiral Sulfoxides.

Authors:  Yan Zhang; Feng Liu; Na Xu; Yin-Qi Wu; Yu-Cong Zheng; Qian Zhao; Guoqiang Lin; Hui-Lei Yu; Jian-He Xu
Journal:  Appl Environ Microbiol       Date:  2018-07-02       Impact factor: 4.792

6.  Camphor pathway redux: functional recombinant expression of 2,5- and 3,6-diketocamphane monooxygenases of Pseudomonas putida ATCC 17453 with their cognate flavin reductase catalyzing Baeyer-Villiger reactions.

Authors:  Hiroaki Iwaki; Stephan Grosse; Hélène Bergeron; Hannes Leisch; Krista Morley; Yoshie Hasegawa; Peter C K Lau
Journal:  Appl Environ Microbiol       Date:  2013-03-22       Impact factor: 4.792

7.  Borneol Dehydrogenase from Pseudomonas sp. Strain TCU-HL1 Catalyzes the Oxidation of (+)-Borneol and Its Isomers to Camphor.

Authors:  Hoi-Lung Tsang; Jui-Lin Huang; Yu-Hsuan Lin; Kai-Fa Huang; Pei-Luen Lu; Guang-Huey Lin; Aye Aye Khine; Anren Hu; Hao-Ping Chen
Journal:  Appl Environ Microbiol       Date:  2016-10-14       Impact factor: 4.792

8.  The substrate-bound crystal structure of a Baeyer-Villiger monooxygenase exhibits a Criegee-like conformation.

Authors:  Brahm J Yachnin; Tara Sprules; Michelle B McEvoy; Peter C K Lau; Albert M Berghuis
Journal:  J Am Chem Soc       Date:  2012-04-27       Impact factor: 15.419

9.  The Origin and Evolution of Baeyer-Villiger Monooxygenases (BVMOs): An Ancestral Family of Flavin Monooxygenases.

Authors:  Maria Laura Mascotti; Walter Jesús Lapadula; Maximiliano Juri Ayub
Journal:  PLoS One       Date:  2015-07-10       Impact factor: 3.240

10.  Cloning, overexpression and biocatalytic exploration of a novel Baeyer-Villiger monooxygenase from Aspergillus fumigatus Af293.

Authors:  Maria Laura Mascotti; Maximiliano Juri Ayub; Hanna Dudek; Marcela Kurina Sanz; Marco W Fraaije
Journal:  AMB Express       Date:  2013-06-14       Impact factor: 3.298

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