Literature DB >> 24443683

SEGMENTATION OF THE COMPLETE SUPERIOR CEREBELLAR PEDUNCLES USING A MULTI-OBJECT GEOMETRIC DEFORMABLE MODEL.

Chuyang Ye1, John A Bogovic1, Sarah H Ying2, Jerry L Prince1.   

Abstract

The superior cerebellar peduncles (SCPs) are white matter tracts that serve as the major efferent pathways from the cerebellum to the thalamus. With diffusion tensor images (DTI), tractography algorithms or volumetric segmentation methods have been able to reconstruct part of the SCPs. However, when the fibers cross, the primary eigenvector (PEV) no longer represents the primary diffusion direction. Therefore, at the crossing of the left and right SCP, known as the decussation of the SCPs (dSCP), fiber tracts propagate incorrectly. To our knowledge, previous methods have not been able to segment the SCPs correctly. In this work, we explore the diffusion properties and seek to volumetrically segment the complete SCPs. The non-crossing SCPs and dSCP are modeled as different objects. A multi-object geometric deformable model is employed to define the boundaries of each piece of the SCPs, with the forces derived from diffusion properties as well as the PEV. We tested our method on a software phantom and real subjects. Results indicate that our method is able to the resolve the crossing and segment the complete SCPs with repeatability.

Entities:  

Keywords:  Fiber crossing; GGVF; MGDM; SCP; Westin index

Year:  2013        PMID: 24443683      PMCID: PMC3892703          DOI: 10.1109/ISBI.2013.6556409

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  9 in total

1.  Homeomorphic brain image segmentation with topological and statistical atlases.

Authors:  Pierre-Louis Bazin; Dzung L Pham
Journal:  Med Image Anal       Date:  2008-06-20       Impact factor: 8.545

2.  Morphology and classification of large neurons in the adult human dentate nucleus: a qualitative and quantitative analysis of 2D images.

Authors:  Dusan Ristanović; Nebojsa T Milosević; Bratislav D Stefanović; Dusica L Marić; Katarina Rajković
Journal:  Neurosci Res       Date:  2010-01-15       Impact factor: 3.304

3.  Direct segmentation of the major white matter tracts in diffusion tensor images.

Authors:  Pierre-Louis Bazin; Chuyang Ye; John A Bogovic; Navid Shiee; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Neuroimage       Date:  2011-06-21       Impact factor: 6.556

4.  A Novel Contrast for DTI Visualization for Thalamus Delineation.

Authors:  Xian Fan; Meredith Thompson; John A Bogovic; Pierre-Louis Bazin; Jerry L Prince
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2010-02-13

5.  Apparent diffusion coefficient of the superior cerebellar peduncle differentiates progressive supranuclear palsy from Parkinson's disease.

Authors:  Giuseppe Nicoletti; Caterina Tonon; Raffaele Lodi; Francesca Condino; David Manners; Emil Malucelli; Maurizio Morelli; Fabiana Novellino; Sandra Paglionico; Pierluigi Lanza; Demetrio Messina; Paolo Barone; Letterio Morgante; Mario Zappia; Bruno Barbiroli; Aldo Quattrone
Journal:  Mov Disord       Date:  2008-12-15       Impact factor: 10.338

6.  A Multiple Object Geometric Deformable Model for Image Segmentation.

Authors:  John A Bogovic; Jerry L Prince; Pierre-Louis Bazin
Journal:  Comput Vis Image Underst       Date:  2013-02-01       Impact factor: 3.876

7.  A diffusion tensor imaging study of middle and superior cerebellar peduncle in male patients with schizophrenia.

Authors:  Fei Wang; Zhiguo Sun; Xiangke Du; Xilin Wang; Zhong Cong; Hongyan Zhang; Dai Zhang; Nan Hong
Journal:  Neurosci Lett       Date:  2003-09-18       Impact factor: 3.046

8.  Orthogonal diffusion-weighted MRI measures distinguish region-specific degeneration in cerebellar ataxia subtypes.

Authors:  Sarah H Ying; Bennett A Landman; Shwetadwip Chowdhury; Alexander H Sinofsky; Anna Gambini; Susumu Mori; David S Zee; Jerry L Prince
Journal:  J Neurol       Date:  2009-08-04       Impact factor: 4.849

9.  Estimating distributed anatomical connectivity using fast marching methods and diffusion tensor imaging.

Authors:  Geoffrey J M Parker; Claudia A M Wheeler-Kingshott; Gareth J Barker
Journal:  IEEE Trans Med Imaging       Date:  2002-05       Impact factor: 10.048

  9 in total
  2 in total

1.  Segmentation of the Cerebellar Peduncles Using a Random Forest Classifier and a Multi-object Geometric Deformable Model: Application to Spinocerebellar Ataxia Type 6.

Authors:  Chuyang Ye; Zhen Yang; Sarah H Ying; Jerry L Prince
Journal:  Neuroinformatics       Date:  2015-07

2.  Quality Assurance using Outlier Detection on an Automatic Segmentation Method for the Cerebellar Peduncles.

Authors:  Ke Li; Chuyang Ye; Zhen Yang; Aaron Carass; Sarah H Ying; Jerry L Prince
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-21
  2 in total

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