Literature DB >> 24440854

Stabilized Interleukin-6 receptor binding RNA aptamers.

Cindy Meyer1, Katharina Berg2, Katja Eydeler-Haeder2, Inken Lorenzen3, Joachim Grötzinger3, Stefan Rose-John3, Ulrich Hahn2.   

Abstract

Interleukin-6 (IL-6) is a multifunctional cytokine that is involved in the progression of various inflammatory diseases, such as rheumatoid arthritis and certain cancers; for example, multiple myeloma or hepatocellular carcinoma. To interfere with IL-6-dependent diseases, targeting IL-6 receptor (IL-6R)-presenting tumor cells using aptamers might be a valuable strategy to broaden established IL-6- or IL-6R-directed treatment regimens. Recently, we reported on the in vitro selection of RNA aptamers binding to the human IL-6 receptor (IL-6R) with nanomolar affinity. One aptamer, namely AIR-3A, was 19 nt in size and able to deliver bulky cargos into IL-6R-presenting cells. As AIR-3A is a natural RNA molecule, its use for in vivo applications might be limited due to its susceptibility to ubiquitous ribonucleases. Aiming at more robust RNA aptamers targeting IL-6R, we now report on the generation of stabilized RNA aptamers for potential in vivo applications. The new 2'-F-modified RNA aptamers bind to IL-6R via its extracellular portion with low nanomolar affinity comparable to the previously identified unmodified counterpart. Aptamers do not interfere with the IL-6 receptor complex formation. The work described here represents one further step to potentially apply stabilized IL-6R-binding RNA aptamers in IL-6R-connected diseases, like multiple myeloma and hepatocellular carcinoma.

Entities:  

Keywords:  Aptamers; Hyper-IL-6; Interleukin-6 receptor; RNA; RNA-protein interaction; SELEX; post-selective modification

Mesh:

Substances:

Year:  2013        PMID: 24440854      PMCID: PMC3929425          DOI: 10.4161/rna.27447

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  42 in total

1.  Inhibition of cell adhesion by anti-P-selectin aptamer: a new potential therapeutic agent for sickle cell disease.

Authors:  Diana R Gutsaeva; James B Parkerson; Shobha D Yerigenahally; Jeffrey C Kurz; Robert G Schaub; Tohru Ikuta; C Alvin Head
Journal:  Blood       Date:  2010-10-06       Impact factor: 22.113

2.  Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase.

Authors:  C Tuerk; L Gold
Journal:  Science       Date:  1990-08-03       Impact factor: 47.728

3.  Identification of a T7 RNA polymerase variant that permits the enzymatic synthesis of fully 2'-O-methyl-modified RNA.

Authors:  Jenny Ibach; Laura Dietrich; Kyra R M Koopmans; Nico Nöbel; Marc Skoupi; Susanne Brakmann
Journal:  J Biotechnol       Date:  2013-07-17       Impact factor: 3.307

4.  Enrichment of cell-targeting and population-specific aptamers by fluorescence-activated cell sorting.

Authors:  Marie-Sophie L Raddatz; Andreas Dolf; Elmar Endl; Percy Knolle; Michael Famulok; Günter Mayer
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

5.  Stat3/Socs3 activation by IL-6 transsignaling promotes progression of pancreatic intraepithelial neoplasia and development of pancreatic cancer.

Authors:  Marina Lesina; Magdalena U Kurkowski; Katharina Ludes; Stefan Rose-John; Matthias Treiber; Günter Klöppel; Akihiko Yoshimura; Wolfgang Reindl; Bence Sipos; Shizuo Akira; Roland M Schmid; Hana Algül
Journal:  Cancer Cell       Date:  2011-04-12       Impact factor: 31.743

6.  Cell type-specific delivery of siRNAs with aptamer-siRNA chimeras.

Authors:  James O McNamara; Eran R Andrechek; Yong Wang; Kristi D Viles; Rachel E Rempel; Eli Gilboa; Bruce A Sullenger; Paloma H Giangrande
Journal:  Nat Biotechnol       Date:  2006-06-25       Impact factor: 54.908

7.  Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.

Authors:  Alfredo Castello; Bernd Fischer; Katrin Eichelbaum; Rastislav Horos; Benedikt M Beckmann; Claudia Strein; Norman E Davey; David T Humphreys; Thomas Preiss; Lars M Steinmetz; Jeroen Krijgsveld; Matthias W Hentze
Journal:  Cell       Date:  2012-05-31       Impact factor: 41.582

8.  Identification and characterization of nuclease-stabilized RNA molecules that bind human prostate cancer cells via the prostate-specific membrane antigen.

Authors:  Shawn E Lupold; Brian J Hicke; Yun Lin; Donald S Coffey
Journal:  Cancer Res       Date:  2002-07-15       Impact factor: 12.701

9.  Potent 2'-amino-2'-deoxypyrimidine RNA inhibitors of basic fibroblast growth factor.

Authors:  D Jellinek; L S Green; C Bell; C K Lynott; N Gill; C Vargeese; G Kirschenheuter; D P McGee; P Abesinghe; W A Pieken
Journal:  Biochemistry       Date:  1995-09-12       Impact factor: 3.162

10.  Novel dual inhibitory function aptamer-siRNA delivery system for HIV-1 therapy.

Authors:  Jiehua Zhou; Haitang Li; Shirley Li; John Zaia; John J Rossi
Journal:  Mol Ther       Date:  2008-05-06       Impact factor: 11.454

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  11 in total

Review 1.  In vitro selection technologies to enhance biomaterial functionality.

Authors:  Jonah C Rosch; Emma K Hollmann; Ethan S Lippmann
Journal:  Exp Biol Med (Maywood)       Date:  2016-05-02

2.  Structure and target interaction of a G-quadruplex RNA-aptamer.

Authors:  Kristina Szameit; Katharina Berg; Sven Kruspe; Erica Valentini; Eileen Magbanua; Marcel Kwiatkowski; Isaure Chauvot de Beauchêne; Boris Krichel; Kira Schamoni; Charlotte Uetrecht; Dmitri I Svergun; Hartmut Schlüter; Martin Zacharias; Ulrich Hahn
Journal:  RNA Biol       Date:  2016-07-29       Impact factor: 4.652

Review 3.  Aptamers Against Pro- and Anti-Inflammatory Cytokines: A Review.

Authors:  Maryam Boshtam; Seddigheh Asgary; Shirin Kouhpayeh; Laleh Shariati; Hossein Khanahmad
Journal:  Inflammation       Date:  2017-02       Impact factor: 4.092

4.  Automated physics-based design of synthetic riboswitches from diverse RNA aptamers.

Authors:  Amin Espah Borujeni; Dennis M Mishler; Jingzhi Wang; Walker Huso; Howard M Salis
Journal:  Nucleic Acids Res       Date:  2015-11-30       Impact factor: 16.971

5.  RAID3--An interleukin-6 receptor-binding aptamer with post-selective modification-resistant affinity.

Authors:  Florian Mittelberger; Cindy Meyer; Georg H Waetzig; Martin Zacharias; Erica Valentini; Dmitri I Svergun; Katharina Berg; Inken Lorenzen; Joachim Grötzinger; Stefan Rose-John; Ulrich Hahn
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

Review 6.  Oligonucleotide aptamers: A next-generation technology for the capture and detection of circulating tumor cells.

Authors:  David D Dickey; Paloma H Giangrande
Journal:  Methods       Date:  2015-11-26       Impact factor: 3.608

7.  Chemically modified DNA aptamers bind interleukin-6 with high affinity and inhibit signaling by blocking its interaction with interleukin-6 receptor.

Authors:  Shashi Gupta; Masao Hirota; Sheela M Waugh; Ikuo Murakami; Tomoki Suzuki; Masahiro Muraguchi; Masafumi Shibamori; Yuichi Ishikawa; Thale C Jarvis; Jeffrey D Carter; Chi Zhang; Bharat Gawande; Michael Vrkljan; Nebojsa Janjic; Daniel J Schneider
Journal:  J Biol Chem       Date:  2014-01-12       Impact factor: 5.157

8.  Agonistic CD200R1 DNA Aptamers Are Potent Immunosuppressants That Prolong Allogeneic Skin Graft Survival.

Authors:  Aaron Prodeus; Marzena Cydzik; Aws Abdul-Wahid; Eric Huang; Ismat Khatri; Reginald Gorczynski; Jean Gariépy
Journal:  Mol Ther Nucleic Acids       Date:  2014-08-26       Impact factor: 10.183

9.  RNA inhibitors of nuclear proteins responsible for multiple organ dysfunction syndrome.

Authors:  Kevin T Urak; Giselle N Blanco; Shambhavi Shubham; Li-Hsien Lin; Justin P Dassie; William H Thiel; Yani Chen; Vijay Kumar Sonkar; Beilei Lei; Shubha Murthy; Wade R Gutierrez; Mary E Wilson; Jonathan A Stiber; Julia Klesney-Tait; Sanjana Dayal; Francis J Miller; Paloma H Giangrande
Journal:  Nat Commun       Date:  2019-01-10       Impact factor: 14.919

Review 10.  Charomers-Interleukin-6 Receptor Specific Aptamers for Cellular Internalization and Targeted Drug Delivery.

Authors:  Ulrich Hahn
Journal:  Int J Mol Sci       Date:  2017-12-06       Impact factor: 5.923

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