Literature DB >> 26631715

Oligonucleotide aptamers: A next-generation technology for the capture and detection of circulating tumor cells.

David D Dickey1, Paloma H Giangrande2.   

Abstract

A critical challenge for treating cancer is the early identification of those patients who are at greatest risk of developing metastatic disease. The number of circulating tumor cells (CTCs) in cancer patients has recently been shown to be a valuable (and non-invasively accessible) diagnostic indicator of the state of metastatic disease. CTCs are rare cancer cells found in the blood circulation of cancer patients believed to provide a means of diagnosing the likelihood for metastatic spread and assessing response to therapy in advanced, as well as early stage disease settings. Numerous technical efforts have been made to reliably detect and quantify CTCs, but the development of a universal assay has proven quite difficult. Notable challenges for developing a broadly useful CTC-based diagnostic assay are the development of easy-to-operate methods that (1) are sufficiently sensitive to reliably detect the small number of CTCs that are present in the circulation and (2) can capture the molecular heterogeneity of tumor cells. In this review, we describe recent progress towards the application of synthetic oligonucleotide aptamers as promising, novel, robust tools for the isolation and detection of CTCs. Advantages and challenges of the aptamer approach are also discussed.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Aptamer; Aptamers; CTC; CTCs; Circulating tumor cells

Mesh:

Substances:

Year:  2015        PMID: 26631715      PMCID: PMC4792782          DOI: 10.1016/j.ymeth.2015.11.020

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  95 in total

Review 1.  DNA and RNA aptamers: from tools for basic research towards therapeutic applications.

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Journal:  Comb Chem High Throughput Screen       Date:  2006-09       Impact factor: 1.339

2.  An Fcγ receptor-dependent mechanism drives antibody-mediated target-receptor signaling in cancer cells.

Authors:  Nicholas S Wilson; Becky Yang; Annie Yang; Stefanie Loeser; Scot Marsters; David Lawrence; Yun Li; Robert Pitti; Klara Totpal; Sharon Yee; Sarajane Ross; Jean-Michel Vernes; Yanmei Lu; Cam Adams; Rienk Offringa; Bob Kelley; Sarah Hymowitz; Dylan Daniel; Gloria Meng; Avi Ashkenazi
Journal:  Cancer Cell       Date:  2011-01-18       Impact factor: 31.743

3.  Multifunctional oval-shaped gold-nanoparticle-based selective detection of breast cancer cells using simple colorimetric and highly sensitive two-photon scattering assay.

Authors:  Wentong Lu; Sri Ranjini Arumugam; Dulal Senapati; Anant K Singh; Tahir Arbneshi; Sadia Afrin Khan; Hongtao Yu; Paresh Chandra Ray
Journal:  ACS Nano       Date:  2010-03-23       Impact factor: 15.881

4.  Identification and characterization of nuclease-stabilized RNA molecules that bind human prostate cancer cells via the prostate-specific membrane antigen.

Authors:  Shawn E Lupold; Brian J Hicke; Yun Lin; Donald S Coffey
Journal:  Cancer Res       Date:  2002-07-15       Impact factor: 12.701

5.  Specific capture and release of circulating tumor cells using aptamer-modified nanosubstrates.

Authors:  Qinglin Shen; Li Xu; Libo Zhao; Dongxia Wu; Yunshan Fan; Yiliang Zhou; Wei-Han Ouyang; Xiaochun Xu; Zhen Zhang; Min Song; Tom Lee; Mitch A Garcia; Bin Xiong; Shuang Hou; Hsian-Rong Tseng; Xiaohong Fang
Journal:  Adv Mater       Date:  2013-03-12       Impact factor: 30.849

6.  Circulating tumour cells as prognostic markers in progressive, castration-resistant prostate cancer: a reanalysis of IMMC38 trial data.

Authors:  Howard I Scher; Xiaoyu Jia; Johann S de Bono; Martin Fleisher; Kenneth J Pienta; Derek Raghavan; Glenn Heller
Journal:  Lancet Oncol       Date:  2009-02-11       Impact factor: 41.316

Review 7.  Current progress on aptamer-targeted oligonucleotide therapeutics.

Authors:  Justin P Dassie; Paloma H Giangrande
Journal:  Ther Deliv       Date:  2013-12

8.  Protection of HIV neutralizing aptamers against rectal and vaginal nucleases: implications for RNA-based therapeutics.

Authors:  Michael D Moore; Jonathan Cookson; Veronica K Coventry; Brian Sproat; Lorna Rabe; Ross D Cranston; Ian McGowan; William James
Journal:  J Biol Chem       Date:  2010-11-24       Impact factor: 5.157

9.  Circulating tumour cell detection: a direct comparison between the CellSearch System, the AdnaTest and CK-19/mammaglobin RT-PCR in patients with metastatic breast cancer.

Authors:  I Van der Auwera; D Peeters; I H Benoy; H J Elst; S J Van Laere; A Prové; H Maes; P Huget; P van Dam; P B Vermeulen; L Y Dirix
Journal:  Br J Cancer       Date:  2009-12-01       Impact factor: 7.640

10.  Circulating tumor cells predict survival benefit from treatment in metastatic castration-resistant prostate cancer.

Authors:  Johann S de Bono; Howard I Scher; R Bruce Montgomery; Christopher Parker; M Craig Miller; Henk Tissing; Gerald V Doyle; Leon W W M Terstappen; Kenneth J Pienta; Derek Raghavan
Journal:  Clin Cancer Res       Date:  2008-10-01       Impact factor: 12.531

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  14 in total

Review 1.  Materials and microfluidics: enabling the efficient isolation and analysis of circulating tumour cells.

Authors:  Joshua M Jackson; Małgorzata A Witek; Joyce W Kamande; Steven A Soper
Journal:  Chem Soc Rev       Date:  2017-07-17       Impact factor: 54.564

Review 2.  Clinical and biological significance of circulating tumor cells in cancer.

Authors:  Takaaki Masuda; Naoki Hayashi; Tomohiro Iguchi; Shuhei Ito; Hidetoshi Eguchi; Koshi Mimori
Journal:  Mol Oncol       Date:  2016-02-10       Impact factor: 6.603

Review 3.  Circulating tumor cell isolation, culture, and downstream molecular analysis.

Authors:  Sandhya Sharma; Rachel Zhuang; Marisa Long; Mirjana Pavlovic; Yunqing Kang; Azhar Ilyas; Waseem Asghar
Journal:  Biotechnol Adv       Date:  2018-03-17       Impact factor: 14.227

4.  Combined use of EpCAM and FRα enables the high-efficiency capture of circulating tumor cells in non-small cell lung cancer.

Authors:  Luojun Chen; Min Peng; Na Li; Qibin Song; Yi Yao; Bin Xu; Huali Liu; Peng Ruan
Journal:  Sci Rep       Date:  2018-01-19       Impact factor: 4.379

Review 5.  Lab-on-a-Chip Platforms for Detection of Cardiovascular Disease and Cancer Biomarkers.

Authors:  Jiandong Wu; Meili Dong; Susy Santos; Claudio Rigatto; Yong Liu; Francis Lin
Journal:  Sensors (Basel)       Date:  2017-12-17       Impact factor: 3.576

6.  Rapid and Sensitive Detection of Breast Cancer Cells in Patient Blood with Nuclease-Activated Probe Technology.

Authors:  Sven Kruspe; David D Dickey; Kevin T Urak; Giselle N Blanco; Matthew J Miller; Karen C Clark; Elliot Burghardt; Wade R Gutierrez; Sneha D Phadke; Sukriti Kamboj; Timothy Ginader; Brian J Smith; Sarah K Grimm; James Schappet; Howard Ozer; Alexandra Thomas; James O McNamara; Carlos H Chan; Paloma H Giangrande
Journal:  Mol Ther Nucleic Acids       Date:  2017-08-12       Impact factor: 8.886

Review 7.  Selection of Nucleic Acid Aptamers Targeting Tumor Cell-Surface Protein Biomarkers.

Authors:  Marie-Cécile Mercier; Monique Dontenwill; Laurence Choulier
Journal:  Cancers (Basel)       Date:  2017-06-21       Impact factor: 6.639

8.  Characterization of the specific interaction between the DNA aptamer sgc8c and protein tyrosine kinase-7 receptors at the surface of T-cells by biosensing AFM.

Authors:  Michael Leitner; Alexandra Poturnayova; Constanze Lamprecht; Sabine Weich; Maja Snejdarkova; Ivana Karpisova; Tibor Hianik; Andreas Ebner
Journal:  Anal Bioanal Chem       Date:  2017-02-22       Impact factor: 4.142

9.  Development of a DNA Aptamer for Screening Neisseria meningitidis Serogroup B by Cell SELEX

Authors:  Kimia Mirzakhani; Seyed Latif Mousavi Gargari; Iraj Rasooli; Samaneh Rasoulinejad
Journal:  Iran Biomed J       Date:  2018-05-01

10.  High throughput sequencing analysis of RNA libraries reveals the influences of initial library and PCR methods on SELEX efficiency.

Authors:  Mayumi Takahashi; Xiwei Wu; Michelle Ho; Pritsana Chomchan; John J Rossi; John C Burnett; Jiehua Zhou
Journal:  Sci Rep       Date:  2016-09-22       Impact factor: 4.379

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