Literature DB >> 24432124

Synthetic molecules: helping to unravel plant signal transduction.

Wei Xuan1, Evan Murphy2, Tom Beeckman1, Dominique Audenaert3, Ive De Smet4.   

Abstract

The application of small molecules has played a crucial role in identifying novel components involved in plant signalling. Compared to classic genetic approaches, small molecule screens offer notable advantages in dissecting plant biological processes, such as technical simplicity, low start-up costs, and most importantly, bypassing the problems of lethality and redundancy. To identify small molecules that target a biological process or protein of interest, robust and well-reasoned high-throughput screening approaches are essential. In this review, we present a series of principles and valuable approaches in small molecule screening in the plant model system Arabidopsis thaliana. We also provide an overview of small molecules that led to breakthroughs in uncovering phytohormone signalling pathways, endomembrane signalling cascades, novel growth regulators, and plant defence mechanisms. Meanwhile, the strategies to deciphering the mechanisms of these small molecules on Arabidopsis are highlighted. Moreover, the opportunities and challenges of small molecule applications in translational biology are discussed.

Entities:  

Keywords:  Chemical biology; Plant growth and development; Screening; Small molecules; Translational biology

Year:  2013        PMID: 24432124      PMCID: PMC3606696          DOI: 10.1007/s12154-013-0091-8

Source DB:  PubMed          Journal:  J Chem Biol        ISSN: 1864-6158


  48 in total

Review 1.  Abscisic acid signaling in seeds and seedlings.

Authors:  Ruth R Finkelstein; Srinivas S L Gampala; Christopher D Rock
Journal:  Plant Cell       Date:  2002       Impact factor: 11.277

Review 2.  Small-molecule inhibitors of protein-protein interactions: progressing towards the dream.

Authors:  Michelle R Arkin; James A Wells
Journal:  Nat Rev Drug Discov       Date:  2004-04       Impact factor: 84.694

3.  The use of high-content screening for the discovery and characterization of compounds that modulate mitotic index and cell cycle progression by differing mechanisms of action.

Authors:  Amy Barabasz; Briana Foley; James C Otto; Anisa Scott; John Rice
Journal:  Assay Drug Dev Technol       Date:  2006-04       Impact factor: 1.738

4.  An in vivo chemical library screen in Xenopus tadpoles reveals novel pathways involved in angiogenesis and lymphangiogenesis.

Authors:  Roland E Kälin; Nadja E Bänziger-Tobler; Michael Detmar; André W Brändli
Journal:  Blood       Date:  2009-05-28       Impact factor: 22.113

5.  Inhibitors of protein kinases and phosphatases alter root morphology and disorganize cortical microtubules.

Authors:  T I Baskin; J E Wilson
Journal:  Plant Physiol       Date:  1997-02       Impact factor: 8.340

6.  Transcriptional responses to cantharidin, a protein phosphatase inhibitor, in Arabidopsis thaliana reveal the involvement of multiple signal transduction pathways.

Authors:  Joanna Bajsa; Zhiqiang Pan; Stephen O Duke
Journal:  Physiol Plant       Date:  2011-07-19       Impact factor: 4.500

Review 7.  Human disease models in Drosophila melanogaster and the role of the fly in therapeutic drug discovery.

Authors:  Udai Bhan Pandey; Charles D Nichols
Journal:  Pharmacol Rev       Date:  2011-03-17       Impact factor: 25.468

8.  A high-content glucocorticoid receptor translocation assay for compound mechanism-of-action evaluation.

Authors:  Michele Agler; Margaret Prack; Yingjie Zhu; Janet Kolb; Kimberly Nowak; Rolf Ryseck; Ding Shen; Mary Ellen Cvijic; John Somerville; Steve Nadler; Taosheng Chen
Journal:  J Biomol Screen       Date:  2007-11-07

9.  Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins.

Authors:  Sang-Youl Park; Pauline Fung; Noriyuki Nishimura; Davin R Jensen; Hiroaki Fujii; Yang Zhao; Shelley Lumba; Julia Santiago; Americo Rodrigues; Tsz-Fung F Chow; Simon E Alfred; Dario Bonetta; Ruth Finkelstein; Nicholas J Provart; Darrell Desveaux; Pedro L Rodriguez; Peter McCourt; Jian-Kang Zhu; Julian I Schroeder; Brian F Volkman; Sean R Cutler
Journal:  Science       Date:  2009-04-30       Impact factor: 47.728

Review 10.  Rational methods for the selection of diverse screening compounds.

Authors:  David J Huggins; Ashok R Venkitaraman; David R Spring
Journal:  ACS Chem Biol       Date:  2011-02-15       Impact factor: 5.100

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  3 in total

1.  The Small Molecule Hyperphyllin Enhances Leaf Formation Rate and Mimics Shoot Meristem Integrity Defects Associated with AMP1 Deficiency.

Authors:  Olena Poretska; Saiqi Yang; Delphine Pitorre; Wilfried Rozhon; Karin Zwerger; Marcos Castellanos Uribe; Sean May; Peter McCourt; Brigitte Poppenberger; Tobias Sieberer
Journal:  Plant Physiol       Date:  2016-05-03       Impact factor: 8.340

2.  Endogenous Bioactive Jasmonate Is Composed of a Set of (+)-7-iso-JA-Amino Acid Conjugates.

Authors:  Jianbin Yan; Suhua Li; Min Gu; Ruifeng Yao; Yuwen Li; Juan Chen; Mai Yang; Jianhua Tong; Langtao Xiao; Fajun Nan; Daoxin Xie
Journal:  Plant Physiol       Date:  2016-10-17       Impact factor: 8.340

Review 3.  Target identification strategies in plant chemical biology.

Authors:  Wim Dejonghe; Eugenia Russinova
Journal:  Front Plant Sci       Date:  2014-07-24       Impact factor: 5.753

  3 in total

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