Literature DB >> 24427517

Multi-scale computational models of the airways to unravel the pathophysiological mechanisms in asthma and chronic obstructive pulmonary disease (AirPROM).

K S Burrowes1, J De Backer2, R Smallwood3, P J Sterk4, I Gut5, R Wirix-Speetjens6, S Siddiqui7, J Owers-Bradley8, J Wild9, D Maier10, C Brightling7.   

Abstract

THE RESPIRATORY SYSTEM COMPRISES SEVERAL SCALES OF BIOLOGICAL COMPLEXITY: the genes, cells and tissues that work in concert to generate resultant function. Malfunctions of the structure or function of components at any spatial scale can result in diseases, to the detriment of gas exchange, right heart function and patient quality of life. Vast amounts of data emerge from studies across each of the biological scales; however, the question remains: how can we integrate and interpret these data in a meaningful way? Respiratory disease presents a huge health and economic burden, with the diseases asthma and chronic obstructive pulmonary disease (COPD) affecting over 500 million people worldwide. Current therapies are inadequate owing to our incomplete understanding of the disease pathophysiology and our lack of recognition of the enormous disease heterogeneity: we need to characterize this heterogeneity on a patient-specific basis to advance healthcare. In an effort to achieve this goal, the AirPROM consortium (Airway disease Predicting Outcomes through patient-specific computational Modelling) brings together a multi-disciplinary team and a wealth of clinical data. Together we are developing an integrated multi-scale model of the airways in order to unravel the complex pathophysiological mechanisms occurring in the diseases asthma and COPD.

Entities:  

Keywords:  asthma; chronic obstructive pulmonary disease; computational modelling

Year:  2013        PMID: 24427517      PMCID: PMC3638469          DOI: 10.1098/rsfs.2012.0057

Source DB:  PubMed          Journal:  Interface Focus        ISSN: 2042-8898            Impact factor:   3.906


  58 in total

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2.  MRI of helium-3 gas in healthy lungs: posture related variations of alveolar size.

Authors:  Stanislao Fichele; Neil Woodhouse; Andrew J Swift; Zead Said; Martyn N J Paley; Larry Kasuboski; Gary H Mills; Edwin J R van Beek; Jim M Wild
Journal:  J Magn Reson Imaging       Date:  2004-08       Impact factor: 4.813

3.  Modeling the dynamics of airway constriction: effects of agonist transport and binding.

Authors:  Samir D Amin; Arnab Majumdar; Urs Frey; Béla Suki
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4.  Minimum information requested in the annotation of biochemical models (MIRIAM).

Authors:  Nicolas Le Novère; Andrew Finney; Michael Hucka; Upinder S Bhalla; Fabien Campagne; Julio Collado-Vides; Edmund J Crampin; Matt Halstead; Edda Klipp; Pedro Mendes; Poul Nielsen; Herbert Sauro; Bruce Shapiro; Jacky L Snoep; Hugh D Spence; Barry L Wanner
Journal:  Nat Biotechnol       Date:  2005-12       Impact factor: 54.908

5.  Multi-scale lung modeling.

Authors:  Merryn H Tawhai; Jason H T Bates
Journal:  J Appl Physiol (1985)       Date:  2011-02-03

6.  The EvA study: aims and strategy.

Authors:  Loems Ziegler-Heitbrock; Marion Frankenberger; Irene Heimbeck; Dorothe Burggraf; Matthias Wjst; Karl Häussinger; Chris Brightling; Sumit Gupta; David Parr; Deepak Subramanian; Dave Singh; Umme Kolsum; Piera Boschetto; Alfredo Potena; Dorota Gorecka; Adam Nowinski; Imre Barta; Balazs Döme; Janos Strausz; Timm Greulich; Claus Vogelmeier; Robert Bals; Jens M Hohlfeld; Tobias Welte; Per Venge; Ivo Gut; Anne Boland; Robert Olaso; Jörg Hager; Pieter Hiemstra; Klaus F Rabe; Martina Unmüssig; Joachim Müller-Quernheim; Antje Prasse
Journal:  Eur Respir J       Date:  2012-03-22       Impact factor: 16.671

7.  Pulmonary embolism: predicting disease severity.

Authors:  K S Burrowes; A R Clark; A Marcinkowski; M L Wilsher; D G Milne; M H Tawhai
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2011-11-13       Impact factor: 4.226

Review 8.  Diagnosis and definition of severe refractory asthma: an international consensus statement from the Innovative Medicine Initiative (IMI).

Authors:  Elisabeth H Bel; Ana Sousa; Louise Fleming; Andrew Bush; K Fan Chung; Jennifer Versnel; Ariane H Wagener; Scott S Wagers; Peter J Sterk; Chris H Compton
Journal:  Thorax       Date:  2010-11-23       Impact factor: 9.139

9.  Functional imaging using computer methods to compare the effect of salbutamol and ipratropium bromide in patient-specific airway models of COPD.

Authors:  L A De Backer; W G Vos; R Salgado; J W De Backer; A Devolder; S L Verhulst; R Claes; P R Germonpré; W A De Backer
Journal:  Int J Chron Obstruct Pulmon Dis       Date:  2011-11-28

10.  Mepolizumab for severe eosinophilic asthma (DREAM): a multicentre, double-blind, placebo-controlled trial.

Authors:  Ian D Pavord; Stephanie Korn; Peter Howarth; Eugene R Bleecker; Roland Buhl; Oliver N Keene; Hector Ortega; Pascal Chanez
Journal:  Lancet       Date:  2012-08-18       Impact factor: 79.321

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  16 in total

Review 1.  In Vitro Testing for Orally Inhaled Products: Developments in Science-Based Regulatory Approaches.

Authors:  Ben Forbes; Per Bäckman; David Christopher; Myrna Dolovich; Bing V Li; Beth Morgan
Journal:  AAPS J       Date:  2015-05-05       Impact factor: 4.009

2.  Enabling Anyone to Translate Clinically Relevant Ideas to Therapies.

Authors:  Sean Ekins; Natalie Diaz; Julia Chung; Paul Mathews; Aaron McMurtray
Journal:  Pharm Res       Date:  2016-09-12       Impact factor: 4.200

3.  Airflow in Tracheobronchial Tree of Subjects with Tracheal Bronchus Simulated Using CT Image Based Models and CFD Method.

Authors:  Shouliang Qi; Baihua Zhang; Yong Yue; Jing Shen; Yueyang Teng; Wei Qian; Jianlin Wu
Journal:  J Med Syst       Date:  2018-03-01       Impact factor: 4.460

4.  Systems Biology and Clinical Practice in Respiratory Medicine. The Twain Shall Meet.

Authors:  Cindy Thamrin; Urs Frey; David A Kaminsky; Helen K Reddel; Andrew J E Seely; Béla Suki; Peter J Sterk
Journal:  Am J Respir Crit Care Med       Date:  2016-11-01       Impact factor: 21.405

5.  A porous circulation model of the human brain for in silico clinical trials in ischaemic stroke.

Authors:  T I Józsa; R M Padmos; N Samuels; W K El-Bouri; A G Hoekstra; S J Payne
Journal:  Interface Focus       Date:  2020-12-11       Impact factor: 3.906

6.  Destination Airway: Tracking Granulocytes in Asthma.

Authors:  Christopher E Brightling
Journal:  EBioMedicine       Date:  2014-11-07       Impact factor: 8.143

7.  Synergy-COPD: a systems approach for understanding and managing chronic diseases.

Authors:  David Gomez-Cabrero; Magi Lluch-Ariet; Jesper Tegnér; Marta Cascante; Felip Miralles; Josep Roca
Journal:  J Transl Med       Date:  2014-11-28       Impact factor: 5.531

8.  Computational modeling of the obstructive lung diseases asthma and COPD.

Authors:  Kelly Suzanne Burrowes; Tom Doel; Chris Brightling
Journal:  J Transl Med       Date:  2014-11-28       Impact factor: 5.531

9.  Skin stem cell hypotheses and long term clone survival--explored using agent-based modelling.

Authors:  X Li; A K Upadhyay; A J Bullock; T Dicolandrea; J Xu; R L Binder; M K Robinson; D R Finlay; K J Mills; C C Bascom; C K Kelling; R J Isfort; J W Haycock; S MacNeil; R H Smallwood
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

10.  Development and Analysis of Patient-Based Complete Conducting Airways Models.

Authors:  Rafel Bordas; Christophe Lefevre; Bart Veeckmans; Joe Pitt-Francis; Catalin Fetita; Christopher E Brightling; David Kay; Salman Siddiqui; Kelly S Burrowes
Journal:  PLoS One       Date:  2015-12-11       Impact factor: 3.240

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