Literature DB >> 24419629

Preliminary X-ray diffraction analysis of thermostable β-1,4-xylanase from Streptomyces sp. S9.

Pin Lv1, Lilan Zhang1, Huiying Luo2, Chun-Chi Chen3, Chun-Hsiang Huang3, Wei Peng1, Kun Wang2, Tzu-Ping Ko4, Yingying Zheng3, Juankun Zhang1, Bin Yao2, Rey-Ting Guo3.   

Abstract

Xylanase, which catalyzes the random hydrolysis of internal xylosidic linkages, is a critical enzyme participating in xylan decomposition and has been widely applied in industrial utilizations. Xylanase isolated from the extremophilic Streptomyces sp. S9 (XynAS9) possesses broad adaptability to temperature and pH and thus is an attractive candidate in industrial applications. In particular, the major products of XynAS9 are xylose and xylobiose, which enable the subsequent bioconversion to be carried out with higher efficiency. Therefore, the three-dimensional structure of XynAS9 and its catalytic machinery are of great interest. Here, recombinant XynAS9 protein was expressed in Pichia pastoris, purified and crystallized. Crystals belonging to the hexagonal space group P6(5)22, with unit-cell parameters a = b = 80.9, c = 289.3 Å, were obtained by the sitting-drop vapour-diffusion method and diffracted to 2.08 Å resolution. Initial phase determination using molecular replacement indicated that the crystal contains one molecule in an asymmetric unit. Further model building and structural refinement are in progress.

Entities:  

Keywords:  Streptomyces; industrial enzymes; thermotolerance; xylanase

Mesh:

Substances:

Year:  2013        PMID: 24419629      PMCID: PMC3943089          DOI: 10.1107/S2053230X13033335

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  9 in total

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Journal:  Crit Rev Biotechnol       Date:  2002       Impact factor: 8.429

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Authors:  Ning Li; Kun Meng; Yaru Wang; Pengjun Shi; Huiying Luo; Yingguo Bai; Peilong Yang; Bin Yao
Journal:  Appl Microbiol Biotechnol       Date:  2008-06-03       Impact factor: 4.813

5.  Processing of X-ray diffraction data collected in oscillation mode.

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Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

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Authors:  Garib N Murshudov; Pavol Skubák; Andrey A Lebedev; Navraj S Pannu; Roberto A Steiner; Robert A Nicholls; Martyn D Winn; Fei Long; Alexei A Vagin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

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Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

  9 in total

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