Literature DB >> 24404383

Autism genes keep turning up chromatin.

Janine M Lasalle1.   

Abstract

Autism-spectrum disorders (ASD) are complex genetic disorders collectively characterized by impaired social interactions and language as well as repetitive and restrictive behaviors. Of the hundreds of genes implicated in ASD, those encoding proteins acting at neuronal synapses have been most characterized by candidate gene studies. However, recent unbiased genome-wide analyses have turned up a multitude of novel candidate genes encoding nuclear factors implicated in chromatin remodeling, histone demethylation, histone variants, and the recognition of DNA methylation. Furthermore, the chromatin landscape of the human genome has been shown to influence the location of de novo mutations observed in ASD as well as the landscape of DNA methylation underlying neurodevelopmental and synaptic processes. Understanding the interactions of nuclear chromatin proteins and DNA with signal transduction pathways and environmental influences in the developing brain will be critical to understanding the relevance of these ASD candidate genes and continued uncovering of the "roots" of autism etiology.

Entities:  

Keywords:  environment; epigenetics; epigenomics; genetics; genomics; metabolism; neurodevelopment; nutrition

Year:  2013        PMID: 24404383      PMCID: PMC3882126          DOI: 10.13172/2052-7810-1-2-610

Source DB:  PubMed          Journal:  OA Autism        ISSN: 2052-7810


  56 in total

1.  Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly.

Authors:  Shireen A Sarraf; Irina Stancheva
Journal:  Mol Cell       Date:  2004-08-27       Impact factor: 17.970

2.  ATRX partners with cohesin and MeCP2 and contributes to developmental silencing of imprinted genes in the brain.

Authors:  Kristin D Kernohan; Yan Jiang; Deanna C Tremblay; Anne C Bonvissuto; James H Eubanks; Mellissa R W Mann; Nathalie G Bérubé
Journal:  Dev Cell       Date:  2010-02-16       Impact factor: 12.270

Review 3.  Facioscapulohumeral muscular dystrophy: molecular pathological advances and future directions.

Authors:  Jeffrey M Statland; Rabi Tawil
Journal:  Curr Opin Neurol       Date:  2011-10       Impact factor: 5.710

4.  X-inactivation profile reveals extensive variability in X-linked gene expression in females.

Authors:  Laura Carrel; Huntington F Willard
Journal:  Nature       Date:  2005-03-17       Impact factor: 49.962

5.  Phosphorylation of distinct sites in MeCP2 modifies cofactor associations and the dynamics of transcriptional regulation.

Authors:  Michael L Gonzales; Sarrita Adams; Keith W Dunaway; Janine M LaSalle
Journal:  Mol Cell Biol       Date:  2012-05-21       Impact factor: 4.272

6.  Identification and characterization of the TRIP8 and REEP3 genes on chromosome 10q21.3 as novel candidate genes for autism.

Authors:  Dries Castermans; Joris R Vermeesch; Jean-Pierre Fryns; Jean G Steyaert; Wim J M Van de Ven; John W M Creemers; Koen Devriendt
Journal:  Eur J Hum Genet       Date:  2007-02-07       Impact factor: 4.246

7.  De novo mutations revealed by whole-exome sequencing are strongly associated with autism.

Authors:  Stephan J Sanders; Michael T Murtha; Abha R Gupta; John D Murdoch; Melanie J Raubeson; A Jeremy Willsey; A Gulhan Ercan-Sencicek; Nicholas M DiLullo; Neelroop N Parikshak; Jason L Stein; Michael F Walker; Gordon T Ober; Nicole A Teran; Youeun Song; Paul El-Fishawy; Ryan C Murtha; Murim Choi; John D Overton; Robert D Bjornson; Nicholas J Carriero; Kyle A Meyer; Kaya Bilguvar; Shrikant M Mane; Nenad Sestan; Richard P Lifton; Murat Günel; Kathryn Roeder; Daniel H Geschwind; Bernie Devlin; Matthew W State
Journal:  Nature       Date:  2012-04-04       Impact factor: 49.962

8.  The human placenta methylome.

Authors:  Diane I Schroeder; John D Blair; Paul Lott; Hung On Ken Yu; Danna Hong; Florence Crary; Paul Ashwood; Cheryl Walker; Ian Korf; Wendy P Robinson; Janine M LaSalle
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-25       Impact factor: 11.205

9.  Plasticity of Foxp3(+) T cells reflects promiscuous Foxp3 expression in conventional T cells but not reprogramming of regulatory T cells.

Authors:  Takahisa Miyao; Stefan Floess; Ruka Setoguchi; Hervé Luche; Hans Joerg Fehling; Herman Waldmann; Jochen Huehn; Shohei Hori
Journal:  Immunity       Date:  2012-02-09       Impact factor: 31.745

10.  Exome sequencing in sporadic autism spectrum disorders identifies severe de novo mutations.

Authors:  Brian J O'Roak; Pelagia Deriziotis; Choli Lee; Laura Vives; Jerrod J Schwartz; Santhosh Girirajan; Emre Karakoc; Alexandra P Mackenzie; Sarah B Ng; Carl Baker; Mark J Rieder; Deborah A Nickerson; Raphael Bernier; Simon E Fisher; Jay Shendure; Evan E Eichler
Journal:  Nat Genet       Date:  2011-05-15       Impact factor: 38.330

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  31 in total

1.  Systematic reconstruction of autism biology from massive genetic mutation profiles.

Authors:  Weijun Luo; Chaolin Zhang; Yong-Hui Jiang; Cory R Brouwer
Journal:  Sci Adv       Date:  2018-04-11       Impact factor: 14.136

Review 2.  Prospects for the development of epigenetic drugs for CNS conditions.

Authors:  Moshe Szyf
Journal:  Nat Rev Drug Discov       Date:  2015-05-22       Impact factor: 84.694

3.  How might epigenetic dysregulation in early embryonic life contribute to autism spectrum disorder?

Authors:  Esther R Berko; John M Greally
Journal:  Epigenomics       Date:  2015       Impact factor: 4.778

Review 4.  Epigenetics and nutritional environmental signals.

Authors:  Elizabeth A Mazzio; Karam F A Soliman
Journal:  Integr Comp Biol       Date:  2014-05-26       Impact factor: 3.326

Review 5.  Behavioral and neuroanatomical approaches in models of neurodevelopmental disorders: opportunities for translation.

Authors:  Jill L Silverman; Jacob Ellegood
Journal:  Curr Opin Neurol       Date:  2018-04       Impact factor: 5.710

6.  Brief Report: SETD2 Mutation in a Child with Autism, Intellectual Disabilities and Epilepsy.

Authors:  Heidi S Lumish; Julia Wynn; Orrin Devinsky; Wendy K Chung
Journal:  J Autism Dev Disord       Date:  2015-11

Review 7.  Development and disease in a dish: the epigenetics of neurodevelopmental disorders.

Authors:  Emily Ma Lewis; Kristen L Kroll
Journal:  Epigenomics       Date:  2018-01-15       Impact factor: 4.778

Review 8.  Neurodevelopmental Outcomes of Prenatal Preeclampsia Exposure.

Authors:  Serena B Gumusoglu; Akanksha S S Chilukuri; Donna A Santillan; Mark K Santillan; Hanna E Stevens
Journal:  Trends Neurosci       Date:  2020-03-06       Impact factor: 13.837

Review 9.  Redox Mechanisms in Neurodegeneration: From Disease Outcomes to Therapeutic Opportunities.

Authors:  Juan I Sbodio; Solomon H Snyder; Bindu D Paul
Journal:  Antioxid Redox Signal       Date:  2018-05-04       Impact factor: 8.401

Review 10.  The Role of Epigenetic Change in Autism Spectrum Disorders.

Authors:  Yuk Jing Loke; Anthony John Hannan; Jeffrey Mark Craig
Journal:  Front Neurol       Date:  2015-05-26       Impact factor: 4.003

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