Literature DB >> 29334242

Development and disease in a dish: the epigenetics of neurodevelopmental disorders.

Emily Ma Lewis1, Kristen L Kroll1.   

Abstract

Human neurodevelopmental disorders (NDDs) involve mutations in hundreds of individual genes, with over-representation in genes encoding proteins that alter chromatin structure to modulate gene expression. Here, we highlight efforts to model these NDDs through in vitro differentiation of patient-specific induced pluripotent stem cells into neurons. We discuss how epigenetic regulation controls normal cortical development, how mutations in several classes of epigenetic regulators contribute to NDDs, and approaches for modeling cortical development and function using both directed differentiation and formation of cerebral organoids. We explore successful applications of these models to study both syndromic and nonsyndromic NDDs and to define convergent mechanisms, addressing both the potential and challenges of using this approach to define cellular and molecular mechanisms that underlie NDDs.

Entities:  

Keywords:  autism spectrum disorder; cerebral cortex; cerebral organoid; chromatin; epigenetic; genetics; in vitro differentiation; induced pluripotent stem cell; neurodevelopmental disorder; neuron

Mesh:

Year:  2018        PMID: 29334242      PMCID: PMC5810842          DOI: 10.2217/epi-2017-0113

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  71 in total

1.  Dental pulp cells for induced pluripotent stem cell banking.

Authors:  N Tamaoki; K Takahashi; T Tanaka; T Ichisaka; H Aoki; T Takeda-Kawaguchi; K Iida; T Kunisada; T Shibata; S Yamanaka; K Tezuka
Journal:  J Dent Res       Date:  2010-06-16       Impact factor: 6.116

Review 2.  Animal models of neuropsychiatric disorders.

Authors:  Eric J Nestler; Steven E Hyman
Journal:  Nat Neurosci       Date:  2010-09-27       Impact factor: 24.884

Review 3.  Annual Research Review: The role of the environment in the developmental psychopathology of autism spectrum condition.

Authors:  William Mandy; Meng-Chuan Lai
Journal:  J Child Psychol Psychiatry       Date:  2016-01-19       Impact factor: 8.982

4.  De novo mutations revealed by whole-exome sequencing are strongly associated with autism.

Authors:  Stephan J Sanders; Michael T Murtha; Abha R Gupta; John D Murdoch; Melanie J Raubeson; A Jeremy Willsey; A Gulhan Ercan-Sencicek; Nicholas M DiLullo; Neelroop N Parikshak; Jason L Stein; Michael F Walker; Gordon T Ober; Nicole A Teran; Youeun Song; Paul El-Fishawy; Ryan C Murtha; Murim Choi; John D Overton; Robert D Bjornson; Nicholas J Carriero; Kyle A Meyer; Kaya Bilguvar; Shrikant M Mane; Nenad Sestan; Richard P Lifton; Murat Günel; Kathryn Roeder; Daniel H Geschwind; Bernie Devlin; Matthew W State
Journal:  Nature       Date:  2012-04-04       Impact factor: 49.962

Review 5.  The Cellular and Molecular Landscapes of the Developing Human Central Nervous System.

Authors:  John C Silbereis; Sirisha Pochareddy; Ying Zhu; Mingfeng Li; Nenad Sestan
Journal:  Neuron       Date:  2016-01-20       Impact factor: 17.173

Review 6.  The Role of Epigenetic Change in Autism Spectrum Disorders.

Authors:  Yuk Jing Loke; Anthony John Hannan; Jeffrey Mark Craig
Journal:  Front Neurol       Date:  2015-05-26       Impact factor: 4.003

7.  CRISPR/Cas9-mediated heterozygous knockout of the autism gene CHD8 and characterization of its transcriptional networks in cerebral organoids derived from iPS cells.

Authors:  Ping Wang; Ryan Mokhtari; Erika Pedrosa; Michael Kirschenbaum; Can Bayrak; Deyou Zheng; Herbert M Lachman
Journal:  Mol Autism       Date:  2017-03-20       Impact factor: 7.509

8.  Crosstalk among Epigenetic Pathways Regulates Neurogenesis.

Authors:  Emily M Jobe; Andrea L McQuate; Xinyu Zhao
Journal:  Front Neurosci       Date:  2012-05-08       Impact factor: 4.677

9.  The autism-associated chromatin modifier CHD8 regulates other autism risk genes during human neurodevelopment.

Authors:  Justin Cotney; Rebecca A Muhle; Stephan J Sanders; Li Liu; A Jeremy Willsey; Wei Niu; Wenzhong Liu; Lambertus Klei; Jing Lei; Jun Yin; Steven K Reilly; Andrew T Tebbenkamp; Candace Bichsel; Mihovil Pletikos; Nenad Sestan; Kathryn Roeder; Matthew W State; Bernie Devlin; James P Noonan
Journal:  Nat Commun       Date:  2015-03-10       Impact factor: 17.694

10.  Molecular Criteria for Defining the Naive Human Pluripotent State.

Authors:  Thorold W Theunissen; Marc Friedli; Yupeng He; Evarist Planet; Ryan C O'Neil; Styliani Markoulaki; Julien Pontis; Haoyi Wang; Alexandra Iouranova; Michaël Imbeault; Julien Duc; Malkiel A Cohen; Katherine J Wert; Rosa Castanon; Zhuzhu Zhang; Yanmei Huang; Joseph R Nery; Jesse Drotar; Tenzin Lungjangwa; Didier Trono; Joseph R Ecker; Rudolf Jaenisch
Journal:  Cell Stem Cell       Date:  2016-07-14       Impact factor: 25.269

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  6 in total

1.  Altered methylation pattern of the SRD5A2 gene in the cerebrospinal fluid of post-finasteride patients: a pilot study.

Authors:  Roberto Cosimo Melcangi; Livio Casarini; Marco Marino; Daniele Santi; Samantha Sperduti; Silvia Giatti; Silvia Diviccaro; Maria Grimoldi; Donatella Caruso; Guido Cavaletti; Manuela Simoni
Journal:  Endocr Connect       Date:  2019-08-01       Impact factor: 3.335

2.  Maternal folic acid impacts DNA methylation profile in male rat offspring implicated in neurodevelopment and learning/memory abilities.

Authors:  Xinyan Wang; Zhenshu Li; Yun Zhu; Jing Yan; Huan Liu; Guowei Huang; Wen Li
Journal:  Genes Nutr       Date:  2021-01-11       Impact factor: 5.523

3.  Regulation of human cortical interneuron development by the chromatin remodeling protein CHD2.

Authors:  E M A Lewis; G Chapman; K Kaushik; J Determan; I Antony; K Meganathan; M Narasimhan; P Gontarz; B Zhang; K L Kroll
Journal:  Sci Rep       Date:  2022-09-17       Impact factor: 4.996

Review 4.  Modeling Neurological Disorders in 3D Organoids Using Human-Derived Pluripotent Stem Cells.

Authors:  Raj Bose; Soumyabrata Banerjee; Gary L Dunbar
Journal:  Front Cell Dev Biol       Date:  2021-05-10

Review 5.  Epigenetic regulation during human cortical development: Seq-ing answers from the brain to the organoid.

Authors:  Emily M A Lewis; Komal Kaushik; Luke A Sandoval; Irene Antony; Sabine Dietmann; Kristen L Kroll
Journal:  Neurochem Int       Date:  2021-04-27       Impact factor: 3.921

Review 6.  Epigenetic regulation of somatostatin and somatostatin receptors in neuroendocrine tumors and other types of cancer.

Authors:  M J Klomp; S U Dalm; M de Jong; R A Feelders; J Hofland; L J Hofland
Journal:  Rev Endocr Metab Disord       Date:  2020-10-21       Impact factor: 9.306

  6 in total

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