Studies on the pathophysiology and genetic basis of migraine.

Migraine is a neurological disorder that affects the central nervous system causing painful attacks of headache. A genetic vulnerability and exposure to environmental triggers can influence the migraine phenotype. Migraine interferes in many facets of people's daily life including employment commitments and their ability to look after their families resulting in a reduced quality of life. Identification of the biological processes that underlie this relatively common affliction has been difficult because migraine does not have any clearly identifiable pathology or structural lesion detectable by current medical technology. Theories to explain the symptoms of migraine have focused on the physiological mechanisms involved in the various phases of headache and include the vascular and neurogenic theories. In relation to migraine pathophysiology the trigeminovascular system and cortical spreading depression have also been implicated with supporting evidence from imaging studies and animal models. The objective of current research is to better understand the pathways and mechanisms involved in causing pain and headache to be able to target interventions. The genetic component of migraine has been teased apart using linkage studies and both candidate gene and genome-wide association studies, in family and case-control cohorts. Genomic regions that increase individual risk to migraine have been identified in neurological, vascular and hormonal pathways. This review discusses knowledge of the pathophysiology and genetic basis of migraine with the latest scientific evidence from genetic studies.

INTRODUCTION

Migraine is a highly prevalent disorder with undetermined cause which is estimated to affect 12% of the Caucasian population including 18% of adult women and 6% of adult men [1, 2]. The prevalence of women suffering from migraine has been attributed to a role of ovarian hormones [3]. The socioeconomic impact of migraine is wide-ranging and long-lasting imposing direct medical costs to individuals, families and communities and indirect costs due to lost productivity at work. The European Community has estimated migraine to cost more than €27 billion per year making it one of the most costly neurological disorders [4].

Migraine typically commences in puberty but has most impact on people in the 35 to 45 age bracket [3]. Migraineurs experience a severe headache with associated symptoms of nausea, vomiting, photo- and phono-phobia [5]. The pain experienced during the headache phase can localise to one side of the head or pulsate and can be worsened by physical activity. The frequency of headache attacks varies, occurring approximately once a week, or once a month to once a year, and in duration from as little as an hour to as much as three days. The variability in frequency of migraine attacks is related to both the genetic component carried by the individual and environmental triggering factors [6].

Migraine is diagnosed based on a patient’s recollection of their symptoms, a positive family history and the exclusion of secondary causes [7]. Symptoms are assessed by symptom-based criteria defined by the International Headache Society (IHS), International Classification of Headache Disorders 3rd Edition (beta version currently available at http://cep.sagepub.com/content/33/9/629.full) [8]. Two main types of migraine have been recognized: migraine with or without aura (MA and MO, respectively). Patients with MA experience an aura that precedes their headache, whilst those with MO do not. The aura is experienced by about a third of patients and consists of neurological symptoms that manifest as visual hallucinations like flashing lights, sparks or lines (followed by dark spots), facial tingling or numbness as well as other sensory, motor or aphasic symptoms that usually last from 5 minutes to an hour [9]. Aura has been linked to an electrophysiological event that occurs during migraine, termed cortical spreading depression (CSD) which is a wave of intense neuronal activity that gradually propagates over the cortical regions of the brain and is then followed by prolonged inhibition of neuronal activity [10].

MIGRAINE PATHOPHYSIOLOGY

Migraine pathophysiology has metamorphosed from a disease originally attributed to supernatural causes to a well characterised neurological disorder [11]. Migraine symptoms arise from a combination of vascular and neurological events occurring in the cranial meninges and as a result this disorder is often described as being of ‘neurovascular’ origin because of the two interacting systems [12]. Some key events implicated are the phenomenom of CSD and activation of the trigeminovascular system with neurogenic inflammation, leading to changes in the meningeal vasculature [13]. The exact sequence for these pathological events and how they interact is not clear but what is known is that genetic mutations affect an individuals’ likelihood of developing migraine and that a number of brain structures, including the trigeminal innervations of the cranial vessels, are involved [14, 15]. The following discussion reviews the current understanding of migraine pathophysiology and studies on the genetic basis of the disorder.

The Vascular and Neurogenic Theories

The exact cause of migraine headache pain is still not completely understood. Historically, two independent theories, the vascular theory and the neuronal theory, explaining the aetiology of migraine headache were proposed. The vascular theory was introduced by Thomas Willis who combined keen clinical observation and meticulous anatomic dissection to redefine thinking about "megrim" [16]. In his vascular theory he recognised that “all pain is an action violated” and argued the pain from headache is caused by vasodilation of the cerebral and meningeal arteries [16].

In the 20th century the work of Graham and Wolff advanced the vascular theory. Graham and Wolff were the first people to study headache in the laboratory from the (1930s-1950s) and fostered the idea that migraine is a vascular event mediated by initial intracranial vasoconstriction that is followed by rebound vasodilation [17]. Consistent with this theory is the throbbing quality of pain and the relief patients experienced with administration of Ergotamine, a potent vasoconstrictor [18]. Also the observed headache inducing effects of nitroglycerin, a vasodilator was taken as added proof of migraine's vascular nature [19]. Finally insights into the mechanism of action of the triptans (serotonin receptor agonists) which revolutionised the treatment of migraine, and more recently calcitonin gene-related peptide (CGRP) agonists, suggest that they may primarily relieve symptoms through cranial vasoconstriction [20].

More recently in a study by Amin et al., 2013 using a high-resolution magnetic resonance angiography imaging technique during spontaneous unilateral migraine attacks has shown that although vasodilation coupled with the release of vasoactive substances is a key physiological occurrence in migraine pathophysiology, dilatation is not the cause of peripheral and central pain pathways [21]. The release of neuropeptides and proinflammatory substances from trigeminal afferents in the meninges accompanies vascular changes and initiates the sensation of pain by sensitizing peripheral and central neurons within the trigeminovascular system [22]. These vascular events cannot be ignored and are important in further understanding the full gamut of migraine processes so as to clarify how a migraine episode is initiated and sustained.

The alternative neurogenic theory centres on migraine being a disorder of the brain where vascular events are best explained by dysfunction of neuronal networks [22]. Migraine is a consequence of neural events which have a strong genetic linkage however the translation of these neural events into migraine pain remains to be explained. Support for the neurogenic theory comes from the fact that certain neurological symptoms that occur during auras cannot be explained by a purely vascular model of headache [23]. This theory focuses on the cause of migraine pain and is currently linked to activation of the trigeminovascular system [22]. The prime component of this system is the trigeminal nerve and its nerve fibers which innervate meningeal blood vessels and other brainstem structures [14]. This theory also implicates the phenomenon of cortical spreading depression (CSD) as the cause of neurological symptoms of aura [24]. Clearly neither theory can account for the entire cascade of events observed and both theories have been integrated in a neurovascular model.

The Trigeminovascular System

The trigeminovascular system (TGVS) consists of the trigeminal nerve and nerve fibers which innervate the network of extra- and intra- cranial meningeal blood vessels and the brain stem [25]. This system is thought to play an integral role in regulating vascular tone and in the transmission of pain signals. Activation of this system during the pain phase of migraine is thought to initiate a cascade of chemical activity from trigeminal sensory nerve endings [14, 26]. Component trigeminal sensory nerves of this system store several vasoactive neuropeptides including: substance P (SP), calcitonin gene-related peptide (CGRP), neurokinin A, nitric oxide (NO) and pituitary adenylate cyclase-activating peptide (PACAP) that upon being released lead to inflammation and dilation of blood vessels aggravating the pain [27]. Neuropeptides are important molecules that cause vasodilation and increase blood flow leading to edema in the meningeal vasculature as well as an inflammatory response around vascular structures in the meninges which is believed to be responsible for head pain [28]. Precisely the peripheral terminations of the TGVS are located in correspondence of the extracranial soft tissues, such as muscles, eye, ear, skin, subcutaneous tissue, nasal cavities, arteries, periosteum, and also of intracranial structures, or venous sinuses, vagus and glossopharyngeal nerves [22].

Cortical Spreading Depression

Cortical spreading depression is an electrophysiological event that was first described in 1943 by Aristides Leão, a Brazilian neurophysiologist doing his doctoral research on epilepsy at Harvard University [29]. Functional neuroimaging studies in human brain have clearly demonstrated changes in blood flow and brain activity in migraineurs that is indicative of CSD [30-32]. CSD is best described as an intense wave that propagates across the cerebral cortex at a rate of 2-5mm/min lasting 15-30mins and that causes disruption of ionic gradients (Ca2+, Na+, K+) followed by a period of suppressed neural activity [33, 34]. Similar events have been reported in stroke and brain injury [24]. CSD has been shown to cause activation and sensitization of the trigeminovascular system, initiating a series of neural, vascular and inflammatory events that result in pain [35]. A recent study has shown that CSD caused Pannexin1 megachannel opening in neurons resulting in caspase-1 activation and HMGB1 release which initiates parenchymal inflammatory pathways and may provide the stimulus for sustained trigeminal activation and lasting pain [36]. CSD is widely accepted to be the cause of visual auras based on experimental evidence from patients and animal models however at present there is no agreement that it is the cause of pain. Although CSD does occur in migraine with aura patients it does not explain the cause of the majority of headaches which occur in 70% of migraineurs.

Animal Models of Migraine

Animal models have been used for many diseases to study the pathological mechanisms and to test the efficacy of drugs. In migraine the broad clinical phenotype and the fact that multiple genetic and environmental factors play a role in the disorder has made the development of a reliable animal model difficult. Nevertheless a variety of animal models of migraine have been developed to better study the pathophysiology of migraine including activation of the trigeminovascular system, the pain-producing cranial structures, the large vessels, dura mater and electrical stimulation of the trigeminal ganglion to illustrate pain pathways and model migraine symptoms such as allodynia [37]. Many animal models also try to replicate the phenomenon of CSD however none of them come close to replicating all facets of the migraine syndrome [38]. Animals have also contributed to the study of migraine mainly by simulating the effects of headache using different pharmacological compounds [39, 40]. A well validated human migraine model is based on the administration of glyceryl trinitrate (GTN) to simulate the effects of headache [41]. Also structures like in vitro blood vessels have served the testing of drugs like triptans and for probing the location of ‘triptan receptors’ in vascular tissue [34]. Additionally Melo-Carrillo et al., 2013 describe a murine model of chronic meningeal nociception that mimics migraine clinical features and propose their technique as a new animal model to study migraine [42]. This model demonstrates an increase in nociceptive behaviours related to headache: rest, facial grooming and freezing as a result of meningeal infusion of inflammatory soup [43]. These models allow the study of migraine in vivo and are good tools with which to screen potential pharmaceutical compounds.

MOLECULAR GENETIC STUDIES OF MIGRAINE

Insights into the genetic basis of migraine have come from a number of different angles. Linkage studies in family pedigrees in which inheritance of migraine is apparent have been used to identify genomic regions, and in some cases the genes, which are responsible for susceptibility. Knowledge gained from studies of migraine pathophysiology has led to investigation of candidate genes in migraine case-control populations and more recently genome-wide association studies in large case-control cohorts have been used to identify genes potentially involved in migraine with no a priori assumptions.

Studies on Familial Hemiplegic Migraine

Familial hemiplegic migraine (FHM), a rare subtype of MA first described by Clarke (1910) in a UK family of 4 generations, has been the object of much interest by geneticists researching migraine [44]. FHM is inherited in an autosomal dominant fashion and some symptoms overlap with those of migraine with aura. FHM symptoms typically include hemiparesis (weakness of half the body) during the aura phase and the aura is generally more prolonged and consists of temporary visual changes such as blind spots (scotomas), flashing lights, zig-zagging lines, and double vision [45]. Familial diagnosis requires that at least one first- or second-degree relative be affected. In cases of identical symptomatology and the absence of affected first- or second-degree relatives, the disorder is classed as sporadic hemiplegic migraine (SHM) [8]. The stronger genetic component and phenotypic overlap of FHM with MA has made FHM a favourable model to study the mechanisms of headache and aura [46].

FHM was the first primary headache disorder connected to genetic mutations [44, 47, 48]. Three causative genes have been identified via linkage in FHM families and include: CACNA1A, ATP1A2 and SCNA1A (Table ). The proteins produced by these genes form channels that regulate the flow of ions across neuronal and glial cell membranes. The common theme that ties these three genes together is ‘ion transport’. The familial forms of hemiplegic migraine identified are referred to as FHM1, FHM2, and FHM3, respectively. Each type of FHM is caused by mutations in a different gene.

The first FHM region (FHM1; MIM141500) was localized to 19p13 and the defective gene CACNA1A (MIM601011) was identified [44]. This gene was identified whilst studying families segregating with cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy (CADASIL), (MIM125310) a disorder that causes stroke and vascular impairments which can also cause migraine [49]. The CACNA1A gene encodes the α1 subunit of the voltage-dependent P/Q-type Ca2+ channel protein [50]. This channel is expressed in neuronal tissue where it regulates the flow of calcium ions Ca2+ into excitable cells [51]. Mutations in this gene contribute to cerebellar ataxia and epilepsy and can cause 2 other neurological disorders with autosomal dominant inheritance, episodic ataxia type 2 (EA2; MIM108500), and spinocerebellar ataxia type 6 (SCA6; MIM183086) [50].

The second type of familial hemiplegic migraine, FHM2 (FHM2; MIM602481), is caused by mutations in the gene ATP1A2 (ATP1A2; MIM182340) [48]. The ATP1A2 gene encodes the α2 isoform of the major subunit of the Na+/K+-ATPase pump. Astrocytes are the main cells expressing this type of channel and when mutated ion pumps have higher resting potentials [52]. The third FHM locus (FHM3; MIM609634) is at 2q24, and the implicated gene SCNA1A (SCN1A; MIM182389) encodes the α1 subunit of the neuronal voltage-gated Na+ channel [53]. This channel is important for action potential generation in neurons. Mutations in SCN1A were first observed to cause the epilepsy syndrome, generalised epilepsy with febrile seizures (GEFS+; MIM604233) and severe myoclonic epilepsy of infancy (SMEI; MIM607208) [54, 55].

Variants in the three FHM genes, however do not account for 100% of FHM cases and it has been proposed that there are additional mutations at other locations that could potentially contribute to the FHM phenotype. SLC1A3 (encoding the glial glutamate transporter EAAT1) and SLC4A4 (encoding the electrogenic sodium bicarbonate cotransporter NBCe1) have been proposed as potential fourth and fifth genes (FHM4 and FHM5) responsible for pure hemiplegic migraine [52, 56]. Functional studies of mutations at each FHM locus in animal and model cells have shown that various missense mutations, large and small scale deletions exist and greatly affect the conductive properties of the channels upsetting the balance of ions in neurons [57]. The flow of ions is critical for normal physiological functioning and any disruption can make people more susceptible to developing these severe headaches.

Mouse Models of FHM

Genetically modified mice have been engineered based on mutations in the three specific genes responsible for FHM with the expectation that they may by extrapolation reflect on the pathophysiology of common migraine subtypes and also due to the fact that no other genes of strong effect are available and amenable to study common migraine [34]. Despite the large number of mutations characterized at each FHM locus, only a small fraction of mutations that produce very extreme phenotypes have been studied in genetically altered mice given the expense and time involved in generating modified animals [58].

Two common FHM1 mutations in the CACNA1A gene have been introduced in knock-in mice: R192Q [59, 60] and S218L [61, 62]. Both mutations change the amino acid sequence of the protein and affect the 3D structure and function of the α1 subunit of the voltage-dependent P/Q-type Ca2+ channel. The channel mediates the influx of calcium ions Ca2+ and changing the amino acid sequence has important consequences to normal physiological functions which can be observed in vivo. The R192Q mutation is located in the fourth transmembrane domain and causes a gain-of-function effect. This mutation contributes to excess release of glutamate in the cortex and has been suggested to increase susceptibility to CSD, the physiological event responsible for the aura in migraine [63]. The phenotype of S218L mutation is more extreme than R192Q and mice exhibit symptoms of cerebellar ataxia, seizure and head trauma and in particular increased sensitivity to CSD [62]. The S218L mutation is located in the second intracellular loop of the protein and mice with this mutation exhibit repetitive CSD events after a single stimulus with an increase in Ca2+ influx [62].

A knock-in mouse carrying the FHM2 mutation W887R in the human ATP1A2 gene has also been generated. This mutation is located in the fourth extracellular loop between transmembrane domains M7 and M8 of the subunit that codes for the Na+-K+ATP pump involved in ion transport in the brain and causes the protein to be non-functional and unable to pump ions. Mice homozygous for this mutation do not survive past birth due to neurological dysfunctions, while in heterozygotes CSD occurs more easily and quickly than in wild type mice [64]. Thus FHM1 and FHM2 mouse models have contributed to better understanding the functional properties of Ca2+ channels and suggest that relevant mutations reduce the threshold for CSD induction and propagation, supporting a role of CSD in triggering migraine [64].

Studies on Common Migraine

The causation of some diseases can be linked primarily to genetic factors, but is more commonly the result of an interaction between genetic and environmental triggers. Migraine is phenotypically and genetically heterogeneous and no single variant can explain the entire underlying genetic component across different families and populations. The common form of migraine does not follow a Mendelian mode of inheritance making the identification of susceptibility genes more complex. However, there is robust evidence from epidemiological studies in twins, families and unrelated cases of migraine indicating genetics plays a significant part in migraine expression. The results indicate that first degree relatives of migraineurs are RR=1.88 times more likely to suffer migraine than first degree relatives of non-migraineurs [65]. The increased occurrence of migraine in close relatives of an affected individual is known as familial aggregation. At the population level heritability is estimated at 0.40-0.60 [66] with the residual heritability reflecting the environmental component influencing the disorder. The variable phenotypic presentation of migraine and the results of many genetic studies to date suggest that common migraine is polygenic.

Migraine Linkage Studies

To date several linkage studies have been performed utilizing families of different ethnic origin and have successfully identified migraine susceptibility loci on a range of chromosomes demonstrating that migraine is polygenic. The majority of linkage studies have used the ‘migraine end diagnosis’ definition to diagnose migraine patients as either MA or MO. This has worked well for the most part however many loci have not been replicated in populations of different ethnicity. It has been suggested by some that the reason for this occurrence is the presence of rare high-impact family specific markers. Other reasons to explain lack of replication include inaccurate migraine diagnosis and phenotyping of migraine cases leading to heterogeneity of cohorts.

Two alternative phenotyping strategies to the end diagnosis have been introduced in an attempt to identify novel regions which are more specifically related to migraine biological processes. One strategy utilizes latent classes (LCA) whilst the other examines trait components (TCA). The LCA and TCA strategies introduced in studies by Nyholt, Anttila and colleagues make better use of the questionnaire-based information [67, 68]. Employment of strategies like LCA and TCA have shown certain chromosomal regions to be linked to specific migraine symptoms like pulsating pain, phono-/photophobia, nausea, and age at onset of migraine. One example is the identification of the 5q21 region in an Australian study and the 17p13 region in a Finnish study associated with pulsating head pain through the application of the LCA method by Nyholt et al., 2005 [69, 70]. Also the LCA method identified linkage at 18p11 [70]. These two methods have added somewhat to standard ICHD 3rd Edition (beta version) classification criteria in identifying linkage regions with specific migraine symptoms.

Out of all the linkage studies done the most consistent locus resides on chromosome 4. This is an interesting candidate region with two independent linkage studies of 50 Finnish MA families showing linkage to 4q24 [67, 71]. Another study using 103 Icelandic families identified an overlapping locus at 4q21 using MO patients only [72]. In a recent study by Oedegaard, et al., 2010 [73] performed in 31 families with bipolar disorder co-morbid with migraine they replicated the 4q24 region implicating this locus as potentially containing a gene predisposing to MA and MO [73].

The power of linkage is evident in the study by Lafreniere et al., 2010 who identified the first causal typical migraine gene in a multigenerational family with dominant, fully penetrant typical MA [74]. The KCNK18 gene at chromosome 10q25.3 encodes a two-pore domain potassium (K2P) channel TRESK (KCNK18; MIM613655). In situ hybridization in the mouse embryo detected expression in the trigeminal ganglion, dorsal root ganglia and autonomic nervous system ganglia implicating TRESK in neuronal excitability [74]. Mutations in TRESK were identified by Sanger sequencing the coding region of 110 unrelated migraineurs and 80 controls. The most interesting variant identified was a frameshift (F139WfsX24) mutation which prematurely truncates the protein and results in a total loss of channel function [75, 76]. Further gene sequencing in an Australian cohort (511 migraine, 505 controls) identified nine additional variants in this gene. The results of these studies indicate functional variants in the KCNK18 gene may be involved in MA pathogenesis by lowering the threshold for CSD. The fact that the gene identified codes for an ion channel strengthens the hypothesis of neuronal hyperexcitability and provides a novel target for the pharmaceutical industry.

CANDIDATE GENE STUDIES

The goal of molecular genetics studies is to find a genetic abnormality that may predispose an individual to a specific disease. This problem is approached by identifying the physiological mechanism causing disease and then looking for a disrupted biochemical product at the protein level that can be exploited pharmacologically or diagnostically [77]. Genetic efforts have focussed on candidate genes involved in pathological pathways of the disease and have examined genes involved in neurological, vascular, hormonal and more recently mitochondrial functions.

Neurological Pathways

Although D’Onofrio et al., 2009 [78] found that a combination of two SNPs in the CACNA1A gene may contribute to migraine susceptibility, polymorphisms in FHM genes have not been generally found to be associated with common migraine [79] and references therein. Neurological candidate genes of the serotonergic and dopaminergic systems have predominantly been investigated in migraine, given that it is a neurological disease with autonomic nervous system symptoms. Receptors, transporters and enzymes involved in neurotransmitter synthesis have been targeted. Evidence for the involvement of serotonin stems from biochemical studies in the 1960s which demonstrated altered levels of circulating 5-HT levels in the urine and platelets of migraineurs during their attacks [80]. Also the fact that serotonin and other neurotransmitters can trigger or affect vascular dysfunction/tone stimulated scientific interest in genes of these neurotransmitter systems as targets to investigate. A fine balance in and across neurotransmitter systems is necessary to maintain normal physiological processes and low function in one system can in turn affect the activity of the other in a cumulative manner.

Various serotonin receptors have been investigated however the most interesting finding was association in the human serotonin transporter SLC6A4 gene located on chromosome 17q11.2 and migraine [81]. The SLC6A4 serotonin transporter codes for an integral membrane protein that clears serotonin at the synapse and recycles it back into neurons and blood platelets. Two main polymorphisms have been identified in this gene and investigated in association studies. One is a 44bp insertion/deletion functional polymorphism in the promoter region, termed 5-HTTLPR with two common allelic forms, the short variant (S) has 14 repeats of a sequence and the long variant (L) has 16 repeats [82]. Initial evidence of association with the promoter 5-HTTLPR polymorphism was correlated with possession of the short S allele [83]. Possession of the S allele results in slower clearing of serotonin from the synaptic cleft due to down-regulation in gene expression meaning that migraineurs express only half the number of serotonin transporters. Some studies identified an association between the S allele in the promoter 5-HTTLPR polymorphism and migraine [84-87], while others found no evidence of association [88, 89]. Schurks et al., 2010 [82] reviewed the literature and performed a meta-analysis of 10 studies to determine if any association existed between the 5-HTTLPR polymorphism and migraine and their results indicate no overall association.

The second polymorphism investigated in the SLC6A4 gene consists of a 17bp variable number of tandem repeats known as (STin2 VNTR) in intron 2 with 2 common alleles STin2.10 and STin2.12 composed of 10 or 12 repeat units [82]. Schurks et al., 2010 [90] conducted a meta-analysis of 5 studies considering this polymorphism and found that 5-HTT VNTR STin2 12/12 genotype is associated with an increased susceptibility to migraine especially among populations of European descent. In an attempt to resolve discrepancies in results of association studies Liu et al., 2011 reviewed 15 studies for meta-analysis and found that the 5-HTT VNTR STin2 12/12 genotype confers an increased risk for migraine in the general population [91]. The two polymorphisms 5-HTTLPR and VNTR in the serotonin transporter SLC6A4 gene have been associated with slower removal of 5-HT at the synapse.

The dopaminergic system has also been investigated in migraine because the interaction of Dopamine (DA) with its receptors is known to mediate certain prodromal symptoms experienced by migraineurs. Dopamine receptor antagonists are effective at relieving migraine and DA receptors have been localised in the trigeminovascular system an integral component of migraine pain mechanisms [92]. Also reports in the literature exist that migraineurs have an increased density of dopamine receptors DRD3 and DRD4 on lymphocytes and that DA agonists can bring about migraine [93, 94]. Genetic studies have thus focused on candidate genes encoding proteins of the dopaminergic system, including DA receptors, DA transporter proteins and enzymes involved in the synthesis and metabolism of DA.

Interest in the role of dopamine in migraine was motivated after Peroutka et al. 1997 identified a susceptibility polymorphism at rs61689984 in the DRD2 gene with increased frequency of the C allele in migraine with aura (0.84) compared to migraine without aura (0.70) and controls (0.71) [95]. Del Zompo et al., 1998 subsequently analysed a number of candidate genes DRD2, DRD3 and DRD4 in a Sardinian population but found no association [96]. Todt et al. 2009 investigated a total of 53 SNPs in 10 genes from the dopaminergic system, including COMT, DBH, DDC, DRD1, DRD2, DRD3, DRD4, DRD5 SLC6A3 and TH, in a large German case-control cohort of migraine with aura and from this study the dopamine transporter SLC6A3 5p15 and DBH 9q34 enzyme emerged as significant [97]. SLC6A3 is an important transporter of dopamine that maintains a low concentration of DA in the extracellular space. However it should be noted that this gene, also named DAT1, showed no association in other studies [98-100].

The DBH locus 9q34 encodes the Dopamine Beta Hydroxylase gene an enzyme involved in synthesis of noradrenaline from the substrate dopamine. There have been some reports of elevated serum levels of DBH enzyme in migraineurs during an attack [101]. Polymorphisms that reduce the plasma enzymatic activity of this gene and lead to an increase in DA have been investigated. The functional DBH insertion/deletion polymorphism 19bp indel (-4784-4803) was found to associate with migraine in an Australian population [102]. In particular migraine risk increases in males with the homozygous del/del genotype up to three times [102]. Also a promoter functional polymorphism (-1021C→ T, rs1611115) in DBH which reduces plasma enzyme activity by up to 52% was found associated with migraine aura in an Australian population [103]. The level of individual DBH activity has a strong genetic background. The study by Todt et al. 2009, showed significant association for another SNP rs2097629 in a German MA population which is not in LD with the promoter polymorphisms [97]. Another group Corominas et al. 2009 analysed 50 tag SNPs in 8 genes from the dopaminergic system: DRD1, DRD2, DRD3, DRD5, DBH, COMT, SLC6A3 and TH in two case control populations of Spanish origin and found no evidence of robust genetic association of any of these genes with migraine. Investigations in dopamine genes have shown some relationship to migraine but results have not always replicated. The DBH locus and the SLC6A3 dopamine transporter seem to correlate with more dopamine at the synapse and support a hypersensitivity to DA hypothesis [104].

The glutamatergic system has not been studied as extensively as that of serotonin and dopamine however the biological constituents including enzymes, glutamate receptors and transporters which mediate excitatory signals via ionotropic and metabotropic receptors have been proposed as candidates to investigate in light of recent genetic studies implicating glutamate in migraine [105-107]. Further research into the glutamatergic system is necessary to confirm its role in migraine susceptibility and pathophysiology.

Vascular Pathways

The link between migraine and the vascular system was encapsulated in the vascular theory proposed by Graham and Wolff in the 20th Century when they hypothesized that pain arises due to dilated blood vessels. Current revised theories of migraine pathophysiology suggest an interaction between cranial blood vessels and the brain’s neural circuitry. The role of the vasculature in migraine pathophysiology is certainly well established given the effects of vasoactive drugs and the observation that migraine is co-morbid with vascular conditions of stroke, Patent Foramen Ovale (PFO) and hypertension [10]. There is a well-known relationship between migraine aura and cardiovascular disease however no causal link has been established [108, 109]. Susceptibility loci on different chromosomes that affect vascular endothelial function have been investigated. These include variants such as the renowned and most cited C677T polymorphism in the homocysteine metabolism gene, MTHFR to nitric oxide synthase (NOS), calcitonin gene-related peptide (CGRP), angiotensin I-converting enzyme (ACE), and the NOTCH3 gene.

The NOTCH3 gene is a gene that encodes a transmembrane receptor involved in cellular differentiation and cell cycle regulation [49, 110]. This gene was identified in a subset of families segregating with cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy (CADASIL; MIM125310) [49]. CADASIL is an inherited condition that causes stroke and other impairments. The underlying pathology of CADASIL is progressive loss of vascular smooth muscle cells in the tunica media of small arteries, and accumulation of granular osmiophilic material (GOM) that is detected by electron microscopy [110]. This damage reduces blood flow to various tissues in the body resulting in ischemia. This blood vessel damage can interestingly cause migraine and other impairments of normal brain function.

Studies of polymorphisms at the MTHFR locus are not unique to migraine as it is a gene which has been implicated in a multitude of diseases due to its central role in the homocysteine (Hcy) pathway. Diseases that have detected a correlation with this gene include neural tube defects, heart disease, stroke, high blood pressure (hypertension), high blood pressure during pregnancy (preeclampsia), an eye disorder called glaucoma, psychiatric disorders, and certain types of cancer [111]. Some of these conditions are co-morbid with migraine. The MTHFR gene located on chromosome 1p36.3 codes for an important enzyme methylenetetrahydrofolate reductase in the Hcy pathway, a pathway that is pivotal to many functions throughout the body including DNA methylation, immune function, muscle metabolism, and regulation of cardiovascular and central nervous system health and removal of toxins [112]. This enzyme is responsible for reducing 5,10-methylenetetrahydrofolate to active 5-methyltetra- hydrofolate, the substrate required for the conversion of homocysteine to methionine in the Hcy pathway [112]. When the MTHFR protein or its levels are compromised Hcy accumulates in the bloodstream and the production of methionine is reduced.

This situation can arise because of genetic alterations in MTHFR. These have been well characterized with more than 40 different polymorphisms identified in the MTHFR gene that reduce the activity of the enzyme and lead to an excess of Hcy in the bloodstream [113]. In migraine the C to T single nucleotide polymorphism (SNP) at codon 677 of the MTHFR gene has been the most extensively studied functional polymorphism for a common migraine type. The MTHFR C677T variant changes an alanine to a valine within the catalytic domain of the enzyme, affecting the quaternary structure of the protein and reducing its enzymatic activity by up to 50% [114]. This reduced enzyme activity leads to higher levels of homocysteine in the blood which contributes to a condition known as mild hyperhomocysteineimia which is a risk factor for migraine and a number of cardiovascular diseases [4]. Although deficiency in MTHFR functionality can produce mild hHcy in humans, this condition can also occur due to environmental factors such as insufficient dietary intake of folate B9, vitamin B12, and vitamin B6.

A few studies indicate that excess Hcy in the blood can cause remodelling of vascular tissue via pathological mechanisms that stimulate the growth of smooth muscle cells, cause endothelial dysfunction by down-regulating expression of endothelial NO synthase and release of inflammatory mediators [115-120]. The vascular changes produced by Hcy are detrimental to arteriolar integrity and can make people more susceptible to vascular inflammation and atherogenesis, which in turn can result in ischemic injury. This has been suggested as a mechanism contributing to migraine on a vascular or ischemic basis.

Although numerous studies have investigated the genetic association of this polymorphism in different migraine populations the status of this gene remains controversial with positive and negative results obtained by independent groups. A couple of Meta analyses have however shed some light on the hypothesised role of the MTHFR gene in migraine. Rubino et al., 2009 pooled results from 8 published articles and identified a significant association for the MTHFR C677T, TT genotype polymorphism but in MA only [111]. A recent Meta analysis conducted by Shurks et al., 2010 pooling results from 13 studies investigating the association of MTHFR C677T variant and migraine identified a positive association for the TT genotype in the MA only group [121]. This study demonstrates that migraine sufferers in particular MA carry the MTHFR 677TT genotype. The TT genotype was associated in both meta-analyses with an increased risk for migraine with aura. It has been suggested that there may be genetic differences which are specific to each of the migraine subtypes. People who have inherited the MTHFR TT genotype have a less active enzyme and are said to be genetically slower homocysteine metabolizers.

The biochemical properties of wild type and mutant MTHFR enzymes reveal that mutations decreasing the activity of MTHFR can contribute to high circulating plasma homocysteine and mild hyperhomocysteineimia, a condition which may contribute to migraine [122]. MTHFR knockout mice show elevated levels of plasma and total homocysteine in comparison to wild-type and suffer other abnormalities, including hypomethylation of their DNA, developmental delay, and thromboses of the arteries and cerebral veins [112]. Biochemical and animal studies have been useful in demonstrating that these abnormalities are due to non-functional MTHFR [112].

A genetic defect in MTHFR activity can be bypassed by increasing dietary intake of B vitamins as shown in a pilot study [65] of migraineurs supplemented with folate B9 and vitamins B12 and B6 over a six month period. Study participants reported an improvement in migraine symptoms, this improved response was correlated with a reduction in homocysteine levels from the supplementation with B vitamins and with carriage of at least one C allele [123]. This study shows that supplementation with B vitamins can help restore balance in this pathway in individuals with this mutation and is an effective Nutrigenomics measure. Clinical trials examining the role of B vitamins in vascular disorders have also implicated MTHFR as a culprit of disease and demonstrated that dietary supplementation with B vitamins can reduce the risk of disease [124-130].

Hormonal Pathways

The influence of female sex hormones in migraine is evident from the noticeably distorted gender ratio (3:1 female to male) clearly observed in migraine prevalence studies [131]. Accordingly women are 3 times more likely to suffer migraine than men, a fact attributed to the influence of menstruation, pregnancy and menopause [132, 133]. Genetic studies of hormonal genes have focused on the estrogen receptor (ESR1) and the progesterone receptor (PGR) genes, a logical choice based on fluctuating hormones of the ovarian cycle which many women recognize as triggers for their migraine.

The observation that migraine prevalence varies with hormonal transitions including pregnancy and menopause has stimulated scientific interest into the impact that endogenous and exogenous hormones have on the frequency and severity of migraine attacks in women. The general trend observed is that migraine affects boys and girls equally at puberty and thereafter increases in adulthood with women predominantly affected [134]. During pregnancy oestrogen is constantly high whilst during menopause hormones fluctuate for a while but then level out and are constantly low post menopause, it is at these times that migraine attacks diminish [135]. Thus lack of hormonal balance, i.e. rapid rise and fall in the circulation is thought to contribute to migraine and may be a trigger particularly in menstruating women as this is the time when hormones are likely to fluctuate [136].

The ovarian hormones estrogen and progesterone are steroid hormones capable of modulating many biological functions in either a genomic (transcription dependent) or nongenomic (non–transcription dependent) mechanism via their cognate receptors [136]. The estrogen and progesterone receptors are among the most studied genes in relation to hormonal pathways in migraine and besides their obvious role in sexual development and reproductive function they also affect functioning of the cardiovascular and nervous systems as well as growth and maintenance of the skeleton [137]. The effect of exogenous estrogen and progesterone in the form of oral contraception or hormone replacement therapy have shown that some womens migraine symptoms can improve because of stabilizing hormonal fluctuations but at the same time can also worsen migraine in certain people [138]. Consequently hormone administration as a therapy in the treatment of migraine is not indicated.

Polymorphisms in ESR1 and PGR have been studied with respect to migraine susceptibility: some studies have shown that independent polymorphisms in ESR1 and PGR are associated with increased migraine risk whilst other studies have detected no association whatsoever. Initial positive findings were detected for ESR1 by Colson et al., 2004 [139] for the G594A SNP rs2228480 in exon 8 in two independent Australian case-control populations (population 1, p<0.008, population 2, p<4x10-5). Variation in this gene is particularly interesting because estrogen receptors have been implicated in disease processes in breast cancer, endometrial cancer, and osteoporosis and the ESR1 SNP rs2228480 was previously found to show association with breast cancer [140]. ESR1 is localized to chromosome 6q25.1 and is expressed in many areas of the brain regulating many functions including regulating gene expression through cell signalling affecting glutamate and serotonin synthesis and CGRP and can regulate vascular tone by stimulating release of NO [141, 142].

The association of this SNP 594G>A (exon 8) with migraine however was not replicated in 3 subsequent studies [143-145]. A further 3 SNPs were investigated in ESR1 namely, 325C>G (exon 4), T/C PvuII SNP (intron 1) and T30C. For SNP 325C>G (exon 4), 5 studies reported no association and 2 studies reported a positive association in a Caucasian population. The T/C PvuII SNP (intron 1) was interrogated in two studies only one reporting a positive association in an Indian population and the T30C was only investigated in a Spanish study and no association detected [146]. In summary the synonymous polymorphisms 325C>G (exon 4) and 594G>A (exon 8) have been investigated the most for ESR1 and migraine. Although they are located in exonic regions of the gene their functional implication in disease is unknown and some have indicated they may be in LD with a nearby causal variant yet to be identified. The ethnicity of the populations used in these studies included, Caucasian, Indian, Finnish and Spanish.

Subsequent to the estrogen receptor, the PROGINS variant (a 306 base pair insertion within intron 7) in PGR located on chromosome 11q22, was next investigated by Colson et al., 2005 in the same Caucasian population. Colson et al., 2005 found a positive association again only to be replicated by Lee et al., 2007 in patients with migraine-associated vertigo and Joshi et al., 2010 in a north Indian population [147]. Interestingly when the original authors analyzed the interaction of both hormonal genes together (ESR1 594A allele and PROGINS variant) they identified a synergistic effect whereby migraine risk was increased 3.2 times [148].

Oterino, et al., 2008 approached the relationship of hormone receptors and migraine from a multigenic, gene-gene interactions perspective [149]. They analysed 5 estrogen related genes: oestrogen receptor 1 gene (αESR1), oestrogen receptor 2 gene (βESR2), follicle stimulating hormone receptor gene (FSHR), CYP19 aromatase gene polypeptide A1 (CYP19A1) and nuclear receptor interacting protein 1 (NRIP1) [149] in case-control cohorts and in pedigrees. The ESR1 C325G locus was genotyped and the ESR1 gene emerged as the strongest candidate associated with migraine, a result which is consistent with previous association studies. The other four genes were tested in migraine because they had not been previously included and they are steroid hormone genes which converge in the estrogenic pathway. FSHR and ESR2 showed less significant association in comparison to ESR1 (p<0.05) higher in the MA phenotype when analysed singularly. Not convinced by this result the authors pursued to analyse the interaction of ESR2-ESR1-FSHR loci together. The best genetic model indicated an interaction in these loci expressed as a risk Haplotype. Two haplotypes were identified only one of which nearly doubled the risk (OR=1.97) for migraine more so in MA and was replicated in family studies. Studying the interaction of genes together is a more powerful approach to understanding the mechanism of gene interactions in disease.

The inconsistencies in association results of hormone receptors were addressed in a review and meta-analysis by Schurks, et al., 2010 [150]. This study included 8 published articles following criteria for reviewing genetic association studies and identified the ESR1 G594A and C325G SNPs as contributors to migraine with pooled Odds Ratios yielding greater statistical significance. The variants increase migraine risk by 40-60% [150]. In contrast the PGR PROGINS variant was not associated. Polymorphisms in ESR1 and PGR may increase migraine prevalence only in some populations demonstrating an ethnic-specific effect.

In trying to understand the effect of hormones in migraine some researchers have focussed on migraine subtypes occurring around menstruation. The International Headache Society (IHS) now recognizes and has included ‘candidate’ criteria for pure menstrual migraine without aura (PMM) and menstrually related migraine without aura (MRM) in the appendix of their International Classification of Headache Disorders, 3rd Edition [8]. This classification modality specifically requires attacks of migraine to occur within a 5-day menstrual window [151]. In the case of PMM, attacks must occur only around the time of the month in at least two out of three menstrual cycles to establish a pattern that is greater than by chance alone whereas in MRM attacks can additionally occur at other times outside of menstruation [8].

Focussing on an “enriched” study group of patients with “menstrual migraine” as highlighted by Colson et al., 2010, whose migraine closely coincides with the hormonal cycle may be the way to go for the future to interpret the relationship between migraine and hormones [152]. Hershey et al., 2012 investigated gene expression in menstrual-related migraine patients (MRM), non-MRM and controls using blood and an affimetrix human exon ST 1.0 array [153]. 279 genes were found differentially expressed for MRM: many of the genes were functionally related having known immune or mitochondrial functions, but only a few were hormone-related. The study supports the notion that although overlaps do exist, MRM patients possess a different genomic expression profile to non MRM individuals, however further validation in other subject groups is required [153]. Although hormones clearly play a role in migraine how they contribute at a physiological level to migraine mechanisms is not well understood and complicated by the complex interactions they have with a number of physiological systems.

Mitochondrial Pathways

Migraine research has recently taken a new direction by investigating genes of the mitochondrial genome. The evidence supporting the idea of mitochondrial involvement in migraine has accumulated from a variety of biochemical, imaging, morphological and genetic studies. Together the data have raised an interesting hypothesis that a dysfunction of mitochondrial energy metabolism could account for the pathogenesis of some subtypes of migraine. The argument put forth is that decreased energy production brought about by defects in oxidative phosphorylation (OXPHOS) may contribute to an energy imbalance in migraine via a decrease in the threshold for cortical spreading depression.

OXPHOS is an important metabolic pathway for the production of energy in the form of adenosine tri-phosphate (ATP) that occurs in the mitochondria [154]. Although ATP is normally produced through oxidative phosphorylation it can also be produced via the creatine kinase reaction by transfer of inorganic phosphate (Pi) from phosphocreatine (PCr) to adenosine diphosphate (ADP) [155]. This metabolic shift occurs when mitochondrial enzymes are saturated or during anaerobic conditions and is considered a measure of mitochondrial efficiency [156]. Cells highly dependent on ATP production have the most mitochondria these include neurons and muscle cells and as a result these tissues are the first to be affected in mitochondrial disorders [154]. The brain in particular has a high energy demand and is sensitive to reduced energy production. Pathogenic mutations affecting mitochondrial function can impair energy metabolism and ion homeostasis in neurons resulting in a range of downstream abnormalities, the full extent of which is not yet characterized or fully understood. Certain mitochondrial encephalopathies show clinical resemblance to migraine these include lactic acidosis and stroke-like episodes (MELAS), myoclonic epilepsy with ragged red fibres (MERRF) and Kearns Sayre syndrome and the Leber's hereditary optic neuropathy (LHON) [157]. The majority of these mitochondrial disorders lead to an “energy deficiency” state and some manifest with migraine headache [158].

Morphological and biochemical studies have showed a reduction in the metabolism of cellular energy in different tissues, including brain. Specific morphologic changes in the mitochondria have been detected; these include ragged red fibres (RRFs) with an abnormal number of sarcolemmal mitochondria and cytochrome c oxidase (COX) negative fibres with a higher fat content in the skeletal muscle of some patients with migraine with prolonged aura and FHM patients [159-161]. Biochemical evidence has shown levels of lactic acid in blood and CSF to be higher in migraine patients [162]. Lactic acid in blood is used as a biomarker of metabolic dysfunction and is typically elevated in mitochondrial disorders. Additionally evidence of reduced activity of several mitochondrial enzymes in the mitochondria of platelets of migraineurs supports the involvement of mitochondria in migraine [163-165]. The consequence of these findings has lead to the therapeutic administration of Nutraceuticals acting on mitochondrial metabolism. Magnesium, co-enzyme Q10 and riboflavin which are enzyme co-factors known to affect components of the respiratory chain have shown some promise [166-169]. Additionally supplementation with vitamins B6, B12 and folate B9 have shown a decrease in severity and frequency of MA attacks [123, 170].

More recently non-invasive imaging techniques, such as magnetic resonance spectroscopy (MRS) have been employed in several studies to quantify in vivo energy metabolism and cerebral metabolites in brain and muscle of migraine patients [156, 160, 161, 171]. Phosphorus-MRS (P-MRS) measurements of phosphorylated metabolites including Pi, PCr, low-energy phosphates (ADP) and high energy phosphates adenosine triphosphate (ATP) from migraine patients reveal a lower ratio of PCr/Pi correlating with less available energy in neurons [155, 156, 172]. A further marker characteristic of a disturbance in energy metabolism is the accumulation of lactate (Lac) during anaerobic glycolysis due to inefficient pyruvate metabolism resulting in lactic acidosis a condition characterized by low pH in body tissues and blood. Proton-MRS (H-MRS) studies have detected high levels of lactate in patients with migraine [173]. Therefore, MRS studies have revealed a lower energy metabolism in brain and muscle of migraine patients which is possibly linked to mitochondrial defects. These studies hint at a mitochondrial component in migraine however it is unclear at this stage if these differences are due to a primary mitochondrial dysfunction or secondary to alterations in brain excitability and thus further studies utilizing consistent methodology in larger homogenous populations are needed [155].

Mutations associated with mitochondrial encephalopathies have been investigated for association in migraine susceptibility however so far no specific mt polymorphisms have been associated with migraine. The most interesting study by Zaki et al., 2009 found two polymorphisms in the mitochondrial genome C16519T and G3010A associated with migraine and cyclic vomiting syndrome CVS patients [174]. Only a small number of genetic studies have examined the influence of mitochondrial DNA variants in migraine susceptibility and to date little has been concluded from these studies due to small sample size [175-180]. A significant drawback of investigating mitochondrial variants in the population is in the recruitment of sufficient numbers of affected people and also the fact that they are often rare with low allele frequency makes it difficult to obtain statistically meaningful results. To overcome some of these obstacles it may be more fruitful to invest in full mitochondrial genome sequencing rather than funding small scale underpowered projects. In summary a thorough examination of mtDNA and nuclear mitochondrial genes and epistatic interactions between the mitochondrial and nuclear genomes would help to address the question of whether a mitochondrial mechanism in migraine is at play.

Migraine Genome Wide Association Studies

Genome wide association studies (GWAS) allow scanning of the genome for gene regions associated with a disease without a priori assumptions about disease aetiology. GWAS has emerged as a powerful genotyping technique capable of genotyping millions of SNPs across the entire genome and involves screening for potential associations between SNPs and complex diseases using DNA from people affected with a disease (cases) and healthy individuals (controls). GWAS studies have been possible thanks to the completion of the Human Genome Project, International HapMap Project, the development of dense genotyping chips and the availability of biobanks, repositories of human genetic material [181]. A GWAS is conducted using SNP arrays, the most popular platforms currently being Illumina and Affimetrix [182].

The first migraine GWAS was of European migraineurs [183] and identified one SNP that reached genome wide significance, this was susceptibility variant rs1835740 at locus 8q22.1 [183] (Table ). This marker rs1835740 is located between the PGCP and MTDH genes, both of which affect the accumulation of glutamate at the synapse. The authors tested the marker’s effect on gene expression by using fibroblasts, primary T cells, and LCLs from umbilical cords in an attempt to propose a mechanism to explain its role in migraine. They showed the risk allele A of this marker to be associated with higher levels of expression of MTDH. MTDH in turn down-regulates EAAT2 gene: a protein responsible for removing glutamate from synapses in the brain. Consequently rs1835740 may contribute to migraine through its effect on MTDH and EAAT2. Reduced activity of EAAT2 may lead to too much extracellular glutamate which may increase susceptibility to CSD.

The second migraine GWAS conducted a meta-analysis of six European cohorts. The most interesting finding from this study is the SNP rs9908234 in the nerve growth factor receptor (NGFR) gene with (P-value 8.00x10-8). The association of this SNP was not replicated in 3 cohorts in the Netherlands and Australia suggesting that population genetics is more complex than expected and hence the need for replication cohorts to validate potential associations [184]. The reason provided by the authors for lack of replication of this SNP is insufficient power due to the nature of the population-based cohorts employed. The cohort used in the study was heterogeneous consisting of patients with variable severity of migraine and a smaller genetic component which the authors argue may prohibit replication. This study also identified modest support for association with the MTDH gene (astrocyte elevated gene 1 or AEG-1) previously associated in the Antilla, et al., 2010 study.

The third GWAS was conducted in a cohort of European women from the Women’s Genome Health Study (WGHS) including 5,122 migraineurs and 18,108 controls [185]. This is the largest migraine GWAS undertaken with a sample size of 23,230. Three new loci were identified, rs2651899 (1p36.32, PRDM16), rs10166942 (23q37.1, TRPM8) rs11172113 (12q13.3, LRP1) [185]. Little is known about the function of PRDM16 and how it relates to migraine. TRPM8 belongs to the TRP super family of channels activated by chemo- and somato-sensation involved in pain pathways. LRP1 is a lipoprotein expressed in brain and vasculature that is co-localized with glutamate receptors in neurons and lends some support to the involvement of the neurotransmitter glutamate in migraine pathophysiology. In conclusion this study has identified 3 unique SNPs in different pathways, although how they each contribute to migraine remains to be determined.

The most recent GWAS was conducted in people of German and Dutch origin using the migraine without aura phenotype only [186]. The previously identified loci TRPM8 and LRP1 were replicated in this GWAS and two new loci MEF2D (myocyte enhancer factor 2D), a transcription factor that regulates neuronal differentiation and TGFBR2 (encoding transforming growth factor β receptor 2) were identified. Minor associations in two other genes PHACTR (phosphatase and actin regulator 1) and ASTN2 were also reported. However replication and functional studies are needed to better understand the involvement and significance of these genes in migraine aetiology.

Although the contribution of GWAS findings to current knowledge of migraine has been modest with a total of four genomic regions found to be significantly and reproducibly implicated, further studies with larger sample groups will increase the power and help to reveal further genes that contribute to migraine. Importantly the genes that have been identified via GWAS with respect to migraine to date are novel and offer new avenues to pursue. While GWAS is effective at identifying novel genes or genomic regions associated with a disease phenotype, it does not identify the causal variant involved at the detected locus or address gene function. However, GWAS can provide fresh insight from which to study how the genes function and contribute to the phenotype or a disease pathway.

CONCLUSIONS AND FUTURE DIRECTIONS

Migraine is a well-studied disorder that results from the interaction of multiple genes with environmental triggers. Physiological studies using new and non-invasive imaging techniques have led to a clearer understanding of migraine pathophysiology providing insights into the basic functioning of the neuronal and vascular systems and how they interact to produce the full spectrum of migraine symptoms. However the origin of the pain experienced during migraine episodes is still widely debated. Similarly genetic studies have produced a large list of genes implicated in migraine, but how they actually participate in migraine processes is still poorly understood for the majority of them leaving many gaps in the jigsaw to be filled. High throughput genotyping and next generation sequencing techniques will greatly enhance the study of migraine genetics in the near future. In particular exome and full genomic sequencing will make detecting mutations involved in migraine that show strong familial inheritance an attainable goal. Future GWAS conducted with larger numbers of samples, will most likely lead to the discovery of more genes of small effect that potentially contribute to the risk of developing migraine and identify genes specific to migraine subgroups, such as MO, MA and MRM. Although there are some effective anti-migraine therapies available and more being developed, their mechanisms of action are not completely known and it is therefore not understood why they do not work for some individuals. More complete understanding of the molecular pathways involved and the relevant genomic profile of migraineurs will aid in the development of new anti-migraine drugs and treatments, and or enable those currently available to be better targeted to suit individuals. Finally, because migraine is a complex disorder with no identifiable pathology the best way to move forward is with a multidisciplinary approach incorporating results from emerging imaging techniques, biochemical, pharmacologic and genetic studies in order to better understand the molecular basis of this debilitating disease.

Table 1.

Familial Hemiplegic Migraine and Defective Genes Identified

	Gene	Chromosome Location	Protein
FHM1 (MIM141500)	CACNA1A	19p13	Pore-forming α1 subunit of neuronal Ca2.1(P/Q type) voltage-gated calcium channels
FHM2 (MIM609634 )	ATP1A2	1q23	Catalytic α2 subunit of a glial and neuronal sodium-potassium pump
FHM3 (MIM602481)	SCN1A	2q24	Pore forming α1 subunit of neuronal Na1.1 voltage-gated sodium channels

Table 2.

Migraine GWAS Studies

Reference	Variants Identified	CASES/CONTROLS	Origin of Samples	Replication Samples
				P value OR (95% CI)
Anttila et al. 2010	rs1835740 (between MTDH and PGCP)	2,731/10,747	Clinic-based; Finland, Germany, The Netherlands	1.69x10-11, OR 1.18, (1.13-1.24)
Ligthart et al. 2011	rs9908234 (NGFR)	2,446/8,534	Population-based; The Netherlands, Iceland	8.00x 10-8
Chasman et al. 2011	rs2651899 (PRDM16) rs10166942 (TRPM8) rs11172113 (LRP1)	5,122/18,108	Population-based; US, European descent	3.8x10-9, OR 1.11 (1.07-1.15) 5.5x10-12, OR 0.85 (0.82-0.89) 4.3x10-9, OR 0.90 (0.87-0.93)
Freilinger et al. 2012	MEF2D Rs1050316 Rs 2274316 Rs 1925950 Rs 3790455 Rs 3790459 Rs 12136856 TGFBR2 Rs 7640543 PHACTR1 Rs 9349379 ASTN2 Rs 6478241 TRPM8 Rs 10166942 Rs 17862920 LRP1 Rs 11172113	2,326/4,580	German-Dutch individuals	7.06x10-11, OR 1.2 (1.14-1.27) 1.17x10-9, OR 1.19 (1.13-1.26) 3.20x10-8, OR 0.86 (0.81-0.91) 3.86x10-8 1, OR 1.16 (1.10-1.23) 9.83x10-13, OR 0.78 (0.73-0.84) 2.97x10-8, OR 0.86 (0.81-0.91)