| Literature DB >> 24393249 |
Fuat Hakan Saner1, Knut Nowak, Dieter Hoyer, Peter Rath, Ali Canbay, Andreas Paul, Michael Koldehoff, Ahmet Elmaağaclı.
Abstract
BACKGROUND: Infections after liver transplantation are the main cause of death in the first year. Recent reports indicate that NOD2 gene mutations increase the risk for inflammatory bowl disease and the severity of graft-versus-host disease in bone marrow transplant patients. Data on polymorphisms in liver transplant patients are sparse. We analyzed 13 single-nucleotide polymorphisms (SNPs) of 13 different gene variants including the SNPs of NOD2 genes from liver recipients. The aim of the study was to evaluate the impact of the SNPs on dialysis-dependent kidney failure, the incidence of infections and patient survival.Entities:
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Year: 2014 PMID: 24393249 PMCID: PMC3890629 DOI: 10.1186/1471-230X-14-4
Source DB: PubMed Journal: BMC Gastroenterol ISSN: 1471-230X Impact factor: 3.067
Polymorphisms (SNPs) tested in all liver transplant patients
| IL 23R | rs11209026 |
| IL 18 RAP | rs917997 |
| TLR1 | rs5743611 |
| TLR4 | rs4986790 |
| TLR9 | rs187084 |
| CARD 9 | rs4077515 |
| NQO | rs1800566 |
| CYP1B1 codon 432 | rs1056836 |
| MTHFR1298 | rs1801131 |
| MTHFR 677 | rs180133 |
| NOD2 G908R | rs2066847 |
| NOD2 L1007F insC | rs20666847 |
| NOD2 R702W | rs2066844 |
Diagnosis leading to transplantation
| 60 | |
| 63 | |
| 22 | |
| 15 | |
| 7 | |
| 11 | |
| 12 | |
| 6 | |
| 3 | |
| 5 | |
| 6 | |
| 3 | |
| 7 | |
| 3 | |
| 8 | |
| 231 |
Miscellaneous: Budd-Chiari Syndome (1); Amyloidosis (2), Cholangiocellular carcinoma (1); Embryonal sarcoma (1); Neuroendocrine tumor (1), secondary biliary cirrhosis (1); alpha 1 antitrypsine deficiency (1).
Clinical variables and characteristics for both cohorts (with and without CSI)
| Age | 52 ± 9 | 53 ± 10 | 0.8 |
| MELD | 21 ± 9 | 25 ± 11 | 0.006 |
| Ventilation time (in hours) | 20 (0–617) | 198 (8–3035) | < 0.001 |
| ICU stay (days) | 4 (1–27) | 18 (2–130) | < 0.001 |
| Hospital stay (days) | 21 (2–136) | 42 (3–244) | < 0.001 |
| Incidence of EAD | 18.2% | 38.7% | < 0.001 |
| DRI | 1.8 ± 0.38 | 1.7 ± 0.36 | 0.16 |
| WIT (min) | 34 ± 12 | 33 ± 7 | 0.7 |
| CIT (min) | 427 ± 136 | 461 ± 154 | 0.1 |
| Incidence of Dialysis | 26.4% | 60.6% | < 0.001 |
CSI: clinical significant infections.
ICU: intensive care unit.
EAD: early allograft dysfunction.
DRI: donor-risk-index.
WIT: warm ischemia time.
CIT: cold ischemia time.
Characteristics of genes and polymorphisms → patients (Pts) with alcoholic liver failure
| IL23R | G/A | 11209026 | 44 (85) | 8 (15) | | 52 |
| IL18 RAP | A/G | 917997 | 25 (48) | 23 (44) | 4 (8) | 52 |
| CARD9 | G/A | 4077515 | 21 (40) | 23 (44) | 8 (15) | 52 |
| NOD2 | C/T | 2066844 | 40 (77) | 12 (23) | | 52 |
| NOD2 | G/C | 2066845 | 48 (80) | 10 (17) | 2(3) | 60 |
| NOD2 | -/C | 2066847 | 47 (90) | 4 (8) | 1 (2) | 52 |
| TLR1 | G/C | 5743611 | 32 (62) | 14 (27) | 6 (12) | 52 |
| TLR4 299 | G/A | 4986790 | 50 (96) | 1 (2) | 1 (2) | 52 |
| TLR4 399 | G/A | 4987233 | 48 (92) | 3 (6) | 1 (2) | 52 |
| TLR9 1237 | C/T | 5743836 | 16 (31) | 27 (53) | 8 (16) | 51 |
| TLR9 1486 | T/C | 187084 | 31 (61) | 19 (37) | 1 (2) | 51 |
| NQO1 609 | C/T | 1800566 | 41 (79) | 9 (17) | 2 (4) | 52 |
| CYP1B1 432 | G/C | 1056836 | 16 (31) | 20 (39) | 15 (30) | 51 |
| MTHFR 677 | T/C | 1801133 | 23 (45) | 22 (43) | 6 (12) | 51 |
| MTHFR 1298 | C/A | 1801131 | 18 (41) | 23 (52) | 3 (7) | 44 |
Characteristics of genes and polymorphisms → patients (Pts) with non-alcoholic liver failure
| IL23R | G/A | 11209026 | 138 (93) | 11 (7) | | 149 |
| IL18 RAP | A/G | 917997 | 75 (51) | 61 (41) | 12 (8) | 148 |
| Card9 | G/A | 4077515 | 59 (40) | 67 (45) | 22 (15) | 148 |
| NOD2 | C/T | 2066844 | 128 (86) | | 21 (14) | 149 |
| NOD2 | G/C | 2066845 | 138 (81) | 22 (13) | 11 (6) | 171 |
| NOD2 | -/C | 2066847 | 145 (97) | 3 (2) | 1 (1) | 149 |
| TLR1 | G/C | 5743611 | 82 (55) | 56 (38) | 11 (7) | 149 |
| TLR4 299 | G/A | 4986790 | 128 (86) | 19 (13) | 2 (1) | 149 |
| TLR4 399 | G/A | 4987233 | 130 (87) | 18 (12) | 1 (1) | 149 |
| TLR9 1237 | C/T | 5743836 | 50 (34) | 68 (46) | 29 (20) | 147 |
| TLR9 1486 | T/C | 187084 | 90 (61) | 47 (32) | 10 (7) | 147 |
| NQO1 609 | C/T | 1800566 | 92 (62) | 47 (31) | 10 (7) | 149 |
| CYP1B1 432 | G/C | 1056836 | 59 (40) | 63 (42) | 26 (18) | 148 |
| MTHFR 677 | T/C | 1801133 | 58 (39) | 66 (45) | 23 (16) | 147 |
| MTHFR 1298 | C/A | 1801131 | 67 (53) | 42 (33) | 18 (14) | 127 |
Figure 1Presents the 1-year survival of patients who received liver transplants for non-alcoholic liver disease. The wild type NOD2 is protective with respect to the survival rate in this cohort. The 1–year survival rate for patients with wild type NOD2 was 75.4% compared to 49.2% in patients with the gene variant.
Clinical variables in alcoholic and non-alcoholic patients
| age | 52 ± 10 | 55 ± 8 | 0.017 |
| CIT (minutes) | 447 ± 145 | 406 ± 124 | 0.048 |
| WIT (minutes) | 33 ± 9 | 34 ± 15 | 0.7 |
| MELD | 22 ± 9 | 21 ± 8 | 0.38 |
| Incidence of EAD | 44.4% | 28.8% | 0.024 |
| Incidence of CSI | 25.7% | 28.3% | 0.4 |
| Incidence of Dialysis | 35.3% | 23.7% | 0.07 |
| DRI | 1.8 ±0.4 | 1.8 ± 0.3 | 0.6 |
| Ventilation time (hours) | 35 (0–1681) | 26 (0–3035) | 0.2 |
| ICU stay (days) | 5.5 (1–71) | 5 (1–130) | 0.4 |
| Hospital stay | 23.5 (2–244) | 28 (3–169) | 0.3 |
ICU: Intensive Care Unit.
EAD: early allograft dysfunction.
DRI: donor-risk-index.
WIT: warm ischemia time.
CIT: cold ischemia time.
CSI: clinical significant infections.