Literature DB >> 24391098

Visualization of O-GlcNAc glycosylation stoichiometry and dynamics using resolvable poly(ethylene glycol) mass tags.

Peter M Clark1, Jessica E Rexach, Linda C Hsieh-Wilson.   

Abstract

O-linked N-acetylglucosamine (O-GlcNAc) glycosylation is a dynamic protein posttranslational modification with roles in processes such as transcription, cell cycle regulation, and metabolism. Detailed mechanistic studies of O-GlcNAc have been hindered by a lack of methods for measuring O-GlcNAc stoichiometries and the interplay of glycosylation with other posttranslational modifications. We recently developed a method for labeling O-GlcNAc-modified proteins with resolvable poly(ethylene glycol) mass tags. This mass-tagging approach enables the direct measurement of glycosylation stoichiometries and the visualization of distinct O-GlcNAc-modified subpopulations. Here, we describe procedures for labeling O-GlcNAc glycoproteins in cell lysates with mass tags.

Entities:  

Keywords:  O-linked N-acetylglucosamine; chemoenzymatic labeling; glycosylation; poly(ethylene glycol); posttranslational modifications; protein subpopulations

Mesh:

Substances:

Year:  2013        PMID: 24391098      PMCID: PMC3931299          DOI: 10.1002/9780470559277.ch130153

Source DB:  PubMed          Journal:  Curr Protoc Chem Biol        ISSN: 2160-4762


  15 in total

1.  Structure-based design of beta 1,4-galactosyltransferase I (beta 4Gal-T1) with equally efficient N-acetylgalactosaminyltransferase activity: point mutation broadens beta 4Gal-T1 donor specificity.

Authors:  Boopathy Ramakrishnan; Pradman K Qasba
Journal:  J Biol Chem       Date:  2002-03-26       Impact factor: 5.157

2.  Sensitive quantitative analysis of disulfide bonds in polypeptides and proteins.

Authors:  T W Thannhauser; Y Konishi; H A Scheraga
Journal:  Anal Biochem       Date:  1984-04       Impact factor: 3.365

3.  Parallel identification of O-GlcNAc-modified proteins from cell lysates.

Authors:  Hwan-Ching Tai; Nelly Khidekel; Scott B Ficarro; Eric C Peters; Linda C Hsieh-Wilson
Journal:  J Am Chem Soc       Date:  2004-09-01       Impact factor: 15.419

Review 4.  Detecting the "O-GlcNAc-ome"; detection, purification, and analysis of O-GlcNAc modified proteins.

Authors:  Natasha E Zachara
Journal:  Methods Mol Biol       Date:  2009

5.  Probing the dynamics of O-GlcNAc glycosylation in the brain using quantitative proteomics.

Authors:  Nelly Khidekel; Scott B Ficarro; Peter M Clark; Marian C Bryan; Danielle L Swaney; Jessica E Rexach; Yi E Sun; Joshua J Coon; Eric C Peters; Linda C Hsieh-Wilson
Journal:  Nat Chem Biol       Date:  2007-05-13       Impact factor: 15.040

Review 6.  Cycling of O-linked beta-N-acetylglucosamine on nucleocytoplasmic proteins.

Authors:  Gerald W Hart; Michael P Housley; Chad Slawson
Journal:  Nature       Date:  2007-04-26       Impact factor: 49.962

7.  Phosphofructokinase 1 glycosylation regulates cell growth and metabolism.

Authors:  Wen Yi; Peter M Clark; Daniel E Mason; Marie C Keenan; Collin Hill; William A Goddard; Eric C Peters; Edward M Driggers; Linda C Hsieh-Wilson
Journal:  Science       Date:  2012-08-24       Impact factor: 47.728

8.  O-linked N-acetylglucosamine is present on the extracellular domain of notch receptors.

Authors:  Aiko Matsuura; Makiko Ito; Yuta Sakaidani; Tatsuhiko Kondo; Kosuke Murakami; Koichi Furukawa; Daita Nadano; Tsukasa Matsuda; Tetsuya Okajima
Journal:  J Biol Chem       Date:  2008-10-23       Impact factor: 5.157

9.  Dynamic O-GlcNAc modification regulates CREB-mediated gene expression and memory formation.

Authors:  Jessica E Rexach; Peter M Clark; Daniel E Mason; Rachael L Neve; Eric C Peters; Linda C Hsieh-Wilson
Journal:  Nat Chem Biol       Date:  2012-01-22       Impact factor: 15.040

10.  Direct in-gel fluorescence detection and cellular imaging of O-GlcNAc-modified proteins.

Authors:  Peter M Clark; Jessica F Dweck; Daniel E Mason; Courtenay R Hart; Suzanne B Buck; Eric C Peters; Brian J Agnew; Linda C Hsieh-Wilson
Journal:  J Am Chem Soc       Date:  2008-08-07       Impact factor: 15.419

View more
  7 in total

1.  Monitoring protein O-linked β-N-acetylglucosamine status via metabolic labeling and copper-free click chemistry.

Authors:  Chin Fen Teo; Lance Wells
Journal:  Anal Biochem       Date:  2014-07-01       Impact factor: 3.365

2.  Optimization of Chemoenzymatic Mass Tagging by Strain-Promoted Cycloaddition (SPAAC) for the Determination of O-GlcNAc Stoichiometry by Western Blotting.

Authors:  Narek Darabedian; John W Thompson; Kelly N Chuh; Linda C Hsieh-Wilson; Matthew R Pratt
Journal:  Biochemistry       Date:  2018-09-24       Impact factor: 3.162

3.  Deciphering the Functions of O-GlcNAc Glycosylation in the Brain: The Role of Site-Specific Quantitative O-GlcNAcomics.

Authors:  John W Thompson; Alexander W Sorum; Linda C Hsieh-Wilson
Journal:  Biochemistry       Date:  2018-07-02       Impact factor: 3.162

4.  GlycoMinestruct: a new bioinformatics tool for highly accurate mapping of the human N-linked and O-linked glycoproteomes by incorporating structural features.

Authors:  Fuyi Li; Chen Li; Jerico Revote; Yang Zhang; Geoffrey I Webb; Jian Li; Jiangning Song; Trevor Lithgow
Journal:  Sci Rep       Date:  2016-10-06       Impact factor: 4.379

5.  O-GlcNAc transferase associates with the MCM2-7 complex and its silencing destabilizes MCM-MCM interactions.

Authors:  Maïté Leturcq; Marlène Mortuaire; Stéphan Hardivillé; Céline Schulz; Tony Lefebvre; Anne-Sophie Vercoutter-Edouart
Journal:  Cell Mol Life Sci       Date:  2018-08-01       Impact factor: 9.261

6.  Metabolic precision labeling enables selective probing of O-linked N-acetylgalactosamine glycosylation.

Authors:  Marjoke F Debets; Omur Y Tastan; Simon P Wisnovsky; Stacy A Malaker; Nikolaos Angelis; Leonhard K R Moeckl; Junwon Choi; Helen Flynn; Lauren J S Wagner; Ganka Bineva-Todd; Aristotelis Antonopoulos; Anna Cioce; William M Browne; Zhen Li; David C Briggs; Holly L Douglas; Gaelen T Hess; Anthony J Agbay; Chloe Roustan; Svend Kjaer; Stuart M Haslam; Ambrosius P Snijders; Michael C Bassik; W E Moerner; Vivian S W Li; Carolyn R Bertozzi; Benjamin Schumann
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-28       Impact factor: 11.205

7.  O-GlcNAcylation of PERIOD regulates its interaction with CLOCK and timing of circadian transcriptional repression.

Authors:  Ying H Li; Xianhui Liu; Jens T Vanselow; Haiyan Zheng; Andreas Schlosser; Joanna C Chiu
Journal:  PLoS Genet       Date:  2019-01-31       Impact factor: 5.917

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.