Literature DB >> 24379371

Hydrophobic plug functions as a gate in voltage-gated proton channels.

Adam Chamberlin1, Feng Qiu, Santiago Rebolledo, Yibo Wang, Sergei Y Noskov, H Peter Larsson.   

Abstract

Voltage-gated proton (Hv1) channels play important roles in the respiratory burst, in pH regulation, in spermatozoa, in apoptosis, and in cancer metastasis. Unlike other voltage-gated cation channels, the Hv1 channel lacks a centrally located pore formed by the assembly of subunits. Instead, the proton permeation pathway in the Hv1 channel is within the voltage-sensing domain of each subunit. The gating mechanism of this pathway is still unclear. Mutagenic and fluorescence studies suggest that the fourth transmembrane (TM) segment (S4) functions as a voltage sensor and that there is an outward movement of S4 during channel activation. Using thermodynamic mutant cycle analysis, we find that the conserved positively charged residues in S4 are stabilized by countercharges in the other TM segments both in the closed and open states. We constructed models of both the closed and open states of Hv1 channels that are consistent with the mutant cycle analysis. These structural models suggest that electrostatic interactions between TM segments in the closed state pull hydrophobic residues together to form a hydrophobic plug in the center of the voltage-sensing domain. Outward S4 movement during channel activation induces conformational changes that remove this hydrophobic plug and instead insert protonatable residues in the center of the channel that, together with water molecules, can form a hydrogen bond chain across the channel for proton permeation. This suggests that salt bridge networks and the hydrophobic plug function as the gate in Hv1 channels and that outward movement of S4 leads to the opening of this gate.

Entities:  

Keywords:  VSOP; blocker; molecular dynamics; mutagenesis cycle; voltage gating

Mesh:

Substances:

Year:  2013        PMID: 24379371      PMCID: PMC3896152          DOI: 10.1073/pnas.1318018111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  55 in total

1.  Coupling between residues on S4 and S1 defines the voltage-sensor resting conformation in NaChBac.

Authors:  Tzur Paldi; Michael Gurevitz
Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

2.  Functionality of the voltage-gated proton channel truncated in S4.

Authors:  Souhei Sakata; Tatsuki Kurokawa; Morten H H Nørholm; Masahiro Takagi; Yoshifumi Okochi; Gunnar von Heijne; Yasushi Okamura
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-14       Impact factor: 11.205

3.  The voltage-gated proton channel Hv1 has two pores, each controlled by one voltage sensor.

Authors:  Francesco Tombola; Maximilian H Ulbrich; Ehud Y Isacoff
Journal:  Neuron       Date:  2008-05-22       Impact factor: 17.173

4.  Disulfide locking a sodium channel voltage sensor reveals ion pair formation during activation.

Authors:  Paul G DeCaen; Vladimir Yarov-Yarovoy; Yong Zhao; Todd Scheuer; William A Catterall
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-22       Impact factor: 11.205

5.  Calculation of the gating charge for the Kv1.2 voltage-activated potassium channel.

Authors:  Fatemeh Khalili-Araghi; Vishwanath Jogini; Vladimir Yarov-Yarovoy; Emad Tajkhorshid; Benoît Roux; Klaus Schulten
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

6.  Acid extrusion from human spermatozoa is mediated by flagellar voltage-gated proton channel.

Authors:  Polina V Lishko; Inna L Botchkina; Andriy Fedorenko; Yuriy Kirichok
Journal:  Cell       Date:  2010-02-05       Impact factor: 41.582

7.  Cooperative nature of gating transitions in K(+) channels as seen from dynamic importance sampling calculations.

Authors:  Elizabeth J Denning; Thomas B Woolf
Journal:  Proteins       Date:  2010-04

8.  Strong cooperativity between subunits in voltage-gated proton channels.

Authors:  Carlos Gonzalez; Hans P Koch; Ben M Drum; H Peter Larsson
Journal:  Nat Struct Mol Biol       Date:  2009-12-20       Impact factor: 15.369

9.  CHARMM-GUI Membrane Builder for mixed bilayers and its application to yeast membranes.

Authors:  Sunhwan Jo; Joseph B Lim; Jeffery B Klauda; Wonpil Im
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

10.  An aqueous H+ permeation pathway in the voltage-gated proton channel Hv1.

Authors:  I Scott Ramsey; Younes Mokrab; Ingrid Carvacho; Zara A Sands; Mark S P Sansom; David E Clapham
Journal:  Nat Struct Mol Biol       Date:  2010-06-13       Impact factor: 15.369

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  45 in total

1.  Direct Interaction between the Voltage Sensors Produces Cooperative Sustained Deactivation in Voltage-gated H+ Channel Dimers.

Authors:  Hiroko Okuda; Yasushige Yonezawa; Yu Takano; Yasushi Okamura; Yuichiro Fujiwara
Journal:  J Biol Chem       Date:  2016-01-11       Impact factor: 5.157

2.  Molecular mechanism underlying β1 regulation in voltage- and calcium-activated potassium (BK) channels.

Authors:  Karen Castillo; Gustavo F Contreras; Amaury Pupo; Yolima P Torres; Alan Neely; Carlos González; Ramon Latorre
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-30       Impact factor: 11.205

3.  Gating Currents in the Hv1 Proton Channel.

Authors:  Victor De La Rosa; Ian Scott Ramsey
Journal:  Biophys J       Date:  2018-06-19       Impact factor: 4.033

4.  X-ray crystal structure of voltage-gated proton channel.

Authors:  Kohei Takeshita; Souhei Sakata; Eiki Yamashita; Yuichiro Fujiwara; Akira Kawanabe; Tatsuki Kurokawa; Yoshifumi Okochi; Makoto Matsuda; Hirotaka Narita; Yasushi Okamura; Atsushi Nakagawa
Journal:  Nat Struct Mol Biol       Date:  2014-03-02       Impact factor: 15.369

5.  Moving gating charges through the gating pore in a Kv channel voltage sensor.

Authors:  Jérôme J Lacroix; H Clark Hyde; Fabiana V Campos; Francisco Bezanilla
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-29       Impact factor: 11.205

6.  In pursuit of an inhibitory drug for the proton channel.

Authors:  Amaury Pupo; Carlos Gonzalez León
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-11       Impact factor: 11.205

7.  Molecular mechanism of Zn2+ inhibition of a voltage-gated proton channel.

Authors:  Feng Qiu; Adam Chamberlin; Briana M Watkins; Alina Ionescu; Marta Elena Perez; Rene Barro-Soria; Carlos González; Sergei Y Noskov; H Peter Larsson
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-19       Impact factor: 11.205

8.  Proton currents constrain structural models of voltage sensor activation.

Authors:  Aaron L Randolph; Younes Mokrab; Ashley L Bennett; Mark Sp Sansom; Ian Scott Ramsey
Journal:  Elife       Date:  2016-08-30       Impact factor: 8.140

9.  Mapping the gating and permeation pathways in the voltage-gated proton channel Hv1.

Authors:  Adam Chamberlin; Feng Qiu; Yibo Wang; Sergei Y Noskov; H Peter Larsson
Journal:  J Mol Biol       Date:  2014-12-04       Impact factor: 5.469

10.  Voltage-dependent structural models of the human Hv1 proton channel from long-timescale molecular dynamics simulations.

Authors:  Andrew D Geragotelis; Mona L Wood; Hendrik Göddeke; Liang Hong; Parker D Webster; Eric K Wong; J Alfredo Freites; Francesco Tombola; Douglas J Tobias
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-27       Impact factor: 11.205

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