Literature DB >> 24377764

Co-production of NDM-1 and OXA-232 by Klebsiella pneumoniae.

Yohei Doi, Jessica A O'Hara, James F Lando, Ashley M Querry, Bethany M Townsend, Anthony W Pasculle, Carlene A Muto.   

Abstract

Entities:  

Keywords:  Escherichia coli; India; Klebsiella pneumoniae; NDM-1; New Delhi metallo-β-lactamase; OXA-232; Pennsylvania; Pittsburgh; United States; bacteria; carbapenemase; metallo-β-lactamase

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Year:  2014        PMID: 24377764      PMCID: PMC3884727          DOI: 10.3201/eid2001.130904

Source DB:  PubMed          Journal:  Emerg Infect Dis        ISSN: 1080-6040            Impact factor:   6.883


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To the Editor: New Delhi metallo-β-lactamase 1 (NDM-1) and OXA-48-group β-lactamase have been increasingly reported as carbapenemases responsible for carbapenem resistance in Enterobacteriaceae worldwide (). However, in the United States, Klebsiella pneumoniae carbapenemase (KPC)–type β-lactamase is the most common carbapenemase among Enterobacteriaceae, especially K. pneumoniae. Isolates producing NDM-1 were first reported in the United States in 2010 (), followed by several case reports and most recently a hospital outbreak in Colorado (–). As for OXA-48-group β-lactamase, 2 cases of infection with OXA-48–producing K. pneumoniae were recently reported from Virginia (). We report K. pneumoniae co-producing NDM-1 and OXA-232, a variant of OXA-48, and Escherichia coli producing NDM-1 that were isolated from the same patient. A 69-year-old woman was hospitalized in India for subarachnoid hemorrhage in January 2013. Her hospitalization was complicated by unsuccessful coil embolization and subsequent hydrocephalus. A ventriculoperitoneal shunt was inserted, and she was transferred to an acute care hospital in Pittsburgh, Pennsylvania, USA, for further management in February 2013. She underwent reinsertion of the shunt and was discharged to a long-term care facility (LTCF 1). She was readmitted to the same hospital because of fever in March 2013. A urine culture collected at the time of readmission grew carbapenem-resistant K. pneumoniae and extended-spectrum β-lactamase–producing E. coli. Although production of KPC-type β-lactamase was initially suspected in K. pneumoniae, the unusually high level of resistance to amikacin (MIC >32 μg/mL) and gentamicin (MIC >8 μg/mL) increased concern for presence of an NDM-1 producer, which is frequently highly resistant to aminoglycosides because of production of 16S rRNA methyltransferase (). A modified Hodge test showed a positive result for carbapenemase production, and a metallo-β-lactamase Etest (bioMérieux, Marcy l’Etoile, France) showed a positive result for metallo-β-lactamase production. PCR and sequencing identified NDM-1 and OXA-232, a 5-aa variant of OXA-48 recently reported in K. pneumoniae isolates from India (). Presence of the gene for 16S rRNA methyltransferase (armA) was also confirmed by PCR and sequencing and accounted for the high-level aminoglycoside resistance. The isolate belonged to sequence type (ST) 14, as determined by multilocus sequence typing, and has been reported to be common among NDM-1–producing K. pneumoniae in Europe (). The patient was discharged to LTCF 1 but was readmitted because of recurrent fever. A urine culture collected at this admission grew carbapenem-resistant K. pneumoniae and carbapenem-resistant E. coli. This E. coli isolate belonged to ST95 and was positive for the NDM-1 gene but negative for the OXA-48 group and armA genes. The original extended-spectrum β-lactamase–producing E. coli isolate belonged to ST3865, which is distinct from ST95. Therefore, it is likely that the patient was already colonized by NDM-1–producing E. coli ST95 at the time of the first admission, but this colonization was not detected in a clinical culture at that time. All K. pneumoniae and E. coli isolates remained susceptible to fosfomycin and colistin. The patient did not receive any antimicrobial drug therapy specific for these isolates because she was deemed to be only colonized with them in the urine. Enhanced contact precautions were also implemented at the time of PCR confirmation of the NDM-1 gene. These precautions included all components of contact precautions (handwashing, gowns, gloves, disinfected/dedicated equipment), and dedicated personnel monitored compliance with these measures around the clock. The patient was eventually discharged to another long-term care facility (LTCF 2) in April 2013. A point surveillance testing for NDM-1–producing Enterobacteriaceae by using rectal swab specimens was conducted for all inpatients at the acute-care hospital and for all residents of the unit at LTCF 2. Testing did not identify any other patients colonized with NDM-1–producing Enterobacteriaceae. In transformation and conjugation experiments, transformants carrying the OXA-232 gene were obtained from K. pneumoniae, but those carrying the NDM-1 gene could not be obtained by either method, suggesting that the 2 genes were not located on the same plasmid. For E. coli, transformants and transconjugants carrying the NDM-1 gene were obtained, which indicated that this gene was located on a self-conjugative plasmid. Detection of NDM-1– or OXA-48-group–producing Enterobacteriaceae, in particular K. pneumoniae, poses a diagnostic challenge in regions to which KPC-producing K. pneumoniae is endemic. In our case, recognition of resistance to multiple aminoglycosides by an automated instrument, which was confirmed to be high level by the disk diffusion method (i.e., no inhibition zone), prompted early detection and implementation of appropriate infection prevention measures. Production of 16S rRNA methyltransferase by KPC-producing K. pneumoniae is extremely rare, and no cases have been identified in the United States. Therefore, we propose that high-level resistance to amikacin and gentamicin can serve as a clue for suspecting potential NDM-1–producing isolates in clinical diagnostic laboratories. Conversely, Enterobacteriaceae producing OXA-48-group carbapenemase, including variants such as OXA-232, do not have characteristic susceptibility patterns and may easily not be recognized in areas with a high background prevalence of KPC-producing organisms. Therefore, organisms producing OXA-48 or their variants might have already spread in the United States.
  10 in total

1.  Diverse sequence types of Klebsiella pneumoniae contribute to the dissemination of blaNDM-1 in India, Sweden, and the United Kingdom.

Authors:  Christian G Giske; Inga Fröding; Chowdhury Mehedi Hasan; Agata Turlej-Rogacka; Mark Toleman; David Livermore; Neil Woodford; Timothy R Walsh
Journal:  Antimicrob Agents Chemother       Date:  2012-02-21       Impact factor: 5.191

2.  First NDM-positive Salmonella sp. strain identified in the United States.

Authors:  Patrice Savard; Ramya Gopinath; Wenming Zhu; Brandon Kitchel; J Kamile Rasheed; Tsigereda Tekle; Ava Roberts; Tracy Ross; Jafar Razeq; B Mark Landrum; Lucy E Wilson; Brandi Limbago; Trish M Perl; Karen C Carroll
Journal:  Antimicrob Agents Chemother       Date:  2011-10-03       Impact factor: 5.191

3.  Updated multiplex polymerase chain reaction for detection of 16S rRNA methylases: high prevalence among NDM-1 producers.

Authors:  Béatrice Berçot; Laurent Poirel; Patrice Nordmann
Journal:  Diagn Microbiol Infect Dis       Date:  2011-10-13       Impact factor: 2.803

4.  Detection of Enterobacteriaceae isolates carrying metallo-beta-lactamase - United States, 2010.

Authors: 
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2010-06-25       Impact factor: 17.586

5.  New Delhi metallo-β-lactamase (NDM-1)-producing Klebsiella pneumoniae: case report and laboratory detection strategies.

Authors:  A Brian Mochon; Omai B Garner; Janet A Hindler; Paul Krogstad; Kevin W Ward; Michael A Lewinski; James K Rasheed; Karen F Anderson; Brandi M Limbago; Romney M Humphries
Journal:  J Clin Microbiol       Date:  2011-02-16       Impact factor: 5.948

6.  First clinical cases of OXA-48-producing carbapenem-resistant Klebsiella pneumoniae in the United States: the "menace" arrives in the new world.

Authors:  Amy J Mathers; Kevin C Hazen; Joanne Carroll; Anthony J Yeh; Heather L Cox; Robert A Bonomo; Costi D Sifri
Journal:  J Clin Microbiol       Date:  2012-11-21       Impact factor: 5.948

7.  Carbapenem-resistant Enterobacteriaceae containing New Delhi metallo-beta-lactamase in two patients - Rhode Island, March 2012.

Authors: 
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2012-06-22       Impact factor: 17.586

8.  Genetic and biochemical characterisation of OXA-232, a carbapenem-hydrolysing class D β-lactamase from Enterobacteriaceae.

Authors:  Anaïs Potron; Emilie Rondinaud; Laurent Poirel; Olivier Belmonte; Sophie Boyer; Sabine Camiade; Patrice Nordmann
Journal:  Int J Antimicrob Agents       Date:  2013-01-08       Impact factor: 5.283

Review 9.  Global spread of Carbapenemase-producing Enterobacteriaceae.

Authors:  Patrice Nordmann; Thierry Naas; Laurent Poirel
Journal:  Emerg Infect Dis       Date:  2011-10       Impact factor: 6.883

10.  Notes from the field: hospital outbreak of carbapenem-resistant Klebsiella pneumoniae producing New Delhi metallo-beta-lactamase--Denver, Colorado, 2012.

Authors: 
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2013-02-15       Impact factor: 17.586

  10 in total
  31 in total

Review 1.  Double- and multi-carbapenemase-producers: the excessively armored bacilli of the current decade.

Authors:  G Meletis; D Chatzidimitriou; N Malisiovas
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2015-04-18       Impact factor: 3.267

2.  Development of a novel real-time PCR assay with high-resolution melt analysis to detect and differentiate OXA-48-Like β-lactamases in carbapenem-resistant Enterobacteriaceae.

Authors:  Peera Hemarajata; Shangxin Yang; Janet A Hindler; Romney M Humphries
Journal:  Antimicrob Agents Chemother       Date:  2015-06-29       Impact factor: 5.191

3.  NDM-5 and OXA-181 Beta-Lactamases, a Significant Threat Continues To Spread in the Americas.

Authors:  Laura J Rojas; Andrea M Hujer; Susan D Rudin; Meredith S Wright; T Nicholas Domitrovic; Steven H Marshall; Kristine M Hujer; Sandra S Richter; Eric Cober; Federico Perez; Mark D Adams; David van Duin; Robert A Bonomo
Journal:  Antimicrob Agents Chemother       Date:  2017-06-27       Impact factor: 5.191

4.  Klebsiella pneumoniae ST147 coproducing NDM-7 carbapenemase and RmtF 16S rRNA methyltransferase in Minnesota.

Authors:  Chang-Seop Lee; Shawn Vasoo; Fupin Hu; Robin Patel; Yohei Doi
Journal:  J Clin Microbiol       Date:  2014-08-20       Impact factor: 5.948

5.  Klebsiella pneumoniae sequence type 11 isolate producing RmtG 16S rRNA methyltransferase from a patient in Miami, Florida.

Authors:  Fupin Hu; L Silvia Munoz-Price; Dennise DePascale; Jesabel I Rivera; Yohei Doi
Journal:  Antimicrob Agents Chemother       Date:  2014-05-19       Impact factor: 5.191

Review 6.  The Global Ascendency of OXA-48-Type Carbapenemases.

Authors:  Johann D D Pitout; Gisele Peirano; Marleen M Kock; Kathy-Anne Strydom; Yasufumi Matsumura
Journal:  Clin Microbiol Rev       Date:  2019-11-13       Impact factor: 26.132

Review 7.  NDM Metallo-β-Lactamases and Their Bacterial Producers in Health Care Settings.

Authors:  Wenjing Wu; Yu Feng; Guangmin Tang; Fu Qiao; Alan McNally; Zhiyong Zong
Journal:  Clin Microbiol Rev       Date:  2019-01-30       Impact factor: 26.132

8.  Comparison of virulence between matt and mucoid colonies of Klebsiella pneumoniae coproducing NDM-1 and OXA-232 isolated from a single patient.

Authors:  Haejeong Lee; Jin Yang Baek; So Yeon Kim; HyunJi Jo; KyeongJin Kang; Jae-Hoon Ko; Sun Young Cho; Doo Ryeon Chung; Kyong Ran Peck; Jae-Hoon Song; Kwan Soo Ko
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9.  Multiyear, Multinational Survey of the Incidence and Global Distribution of Metallo-β-Lactamase-Producing Enterobacteriaceae and Pseudomonas aeruginosa.

Authors:  Krystyna M Kazmierczak; Sharon Rabine; Meredith Hackel; Robert E McLaughlin; Douglas J Biedenbach; Samuel K Bouchillon; Daniel F Sahm; Patricia A Bradford
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10.  Whole-genome assembly of Klebsiella pneumoniae coproducing NDM-1 and OXA-232 carbapenemases using single-molecule, real-time sequencing.

Authors:  Yohei Doi; Tracy H Hazen; Matthew Boitano; Yu-Chih Tsai; Tyson A Clark; Jonas Korlach; David A Rasko
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