Literature DB >> 24376375

Studying PubMed usages in the field for complex problem solving: Implications for tool design.

Barbara Mirel1, Jean Song2, Jennifer Steiner Tonks3, Fan Meng4, Weijian Xuan5, Rafiqa Ameziane6.   

Abstract

Many recent studies on MEDLINE-based information seeking have shed light on scientists' behaviors and associated tool innovations that may improve efficiency and effectiveness. Few if any studies, however, examine scientists' problem-solving uses of PubMed in actual contexts of work and corresponding needs for better tool support. Addressing this gap, we conducted a field study of novice scientists (14 upper level undergraduate majors in molecular biology) as they engaged in a problem solving activity with PubMed in a laboratory setting. Findings reveal many common stages and patterns of information seeking across users as well as variations, especially variations in cognitive search styles. Based on findings, we suggest tool improvements that both confirm and qualify many results found in other recent studies. Our findings highlight the need to use results from context-rich studies to inform decisions in tool design about when to offer improved features to users.

Entities:  

Year:  2013        PMID: 24376375      PMCID: PMC3873776          DOI: 10.1002/asi.22796

Source DB:  PubMed          Journal:  J Am Soc Inf Sci Technol        ISSN: 1532-2882


  26 in total

1.  The usefulness of dynamically categorizing search results.

Authors:  W Pratt; L Fagan
Journal:  J Am Med Inform Assoc       Date:  2000 Nov-Dec       Impact factor: 4.497

2.  PubMed Assistant: a biologist-friendly interface for enhanced PubMed search.

Authors:  Jing Ding; Laron M Hughes; Daniel Berleant; Andy W Fulmer; Eve Syrkin Wurtele
Journal:  Bioinformatics       Date:  2005-12-06       Impact factor: 6.937

3.  Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion.

Authors:  Shashank Agarwal; Hong Yu
Journal:  Bioinformatics       Date:  2009-09-25       Impact factor: 6.937

4.  Concept-based query expansion for retrieving gene related publications from MEDLINE.

Authors:  Sérgio Matos; Joel P Arrais; João Maia-Rodrigues; José Luis Oliveira
Journal:  BMC Bioinformatics       Date:  2010-04-28       Impact factor: 3.169

5.  Arrowsmith two-node search interface: a tutorial on finding meaningful links between two disparate sets of articles in MEDLINE.

Authors:  Neil R Smalheiser; Vetle I Torvik; Wei Zhou
Journal:  Comput Methods Programs Biomed       Date:  2009-01-30       Impact factor: 5.428

6.  Cross-domain neurobiology data integration and exploration.

Authors:  Weijian Xuan; Manhong Dai; Josh Buckner; Barbara Mirel; Jean Song; Brian Athey; Stanley J Watson; Fan Meng
Journal:  BMC Genomics       Date:  2010-12-01       Impact factor: 3.969

Review 7.  PubMed and beyond: a survey of web tools for searching biomedical literature.

Authors:  Zhiyong Lu
Journal:  Database (Oxford)       Date:  2011-01-18       Impact factor: 3.451

8.  PubFocus: semantic MEDLINE/PubMed citations analytics through integration of controlled biomedical dictionaries and ranking algorithm.

Authors:  Maksim V Plikus; Zina Zhang; Cheng-Ming Chuong
Journal:  BMC Bioinformatics       Date:  2006-10-02       Impact factor: 3.307

9.  PubNet: a flexible system for visualizing literature derived networks.

Authors:  Shawn M Douglas; Gaetano T Montelione; Mark Gerstein
Journal:  Genome Biol       Date:  2005-08-16       Impact factor: 13.583

10.  Understanding PubMed user search behavior through log analysis.

Authors:  Rezarta Islamaj Dogan; G Craig Murray; Aurélie Névéol; Zhiyong Lu
Journal:  Database (Oxford)       Date:  2009-11-27       Impact factor: 3.451

View more
  4 in total

Review 1.  Informatics Support for Basic Research in Biomedicine.

Authors:  Thomas C Rindflesch; Catherine L Blake; Marcelo Fiszman; Halil Kilicoglu; Graciela Rosemblat; Jodi Schneider; Caroline J Zeiss
Journal:  ILAR J       Date:  2017-07-01

2.  Use of scientific social networking to improve the research strategies of PubMed readers.

Authors:  Pavel Evdokimov; Alexey Kudryavtsev; Ekaterina Ilgisonis; Elena Ponomarenko; Andrey Lisitsa
Journal:  BMC Res Notes       Date:  2016-02-18

3.  Editorial.

Authors:  E de Jonge
Journal:  Facts Views Vis Obgyn       Date:  2014

4.  Investigating the role of interleukin-1 beta and glutamate in inflammatory bowel disease and epilepsy using discovery browsing.

Authors:  Thomas C Rindflesch; Catherine L Blake; Michael J Cairelli; Marcelo Fiszman; Caroline J Zeiss; Halil Kilicoglu
Journal:  J Biomed Semantics       Date:  2018-12-27
  4 in total

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