Literature DB >> 24372101

Two-dimensional sum-frequency generation reveals structure and dynamics of a surface-bound peptide.

Jennifer E Laaser1, David R Skoff, Jia-Jung Ho, Yongho Joo, Arnaldo L Serrano, Jay D Steinkruger, Padma Gopalan, Samuel H Gellman, Martin T Zanni.   

Abstract

Surface-bound polypeptides and proteins are increasingly used to functionalize inorganic interfaces such as electrodes, but their structural characterization is exceedingly difficult with standard technologies. In this paper, we report the first two-dimensional sum-frequency generation (2D SFG) spectra of a peptide monolayer, which are collected by adding a mid-IR pulse shaper to a standard femtosecond SFG spectrometer. On a gold surface, standard FTIR spectroscopy is inconclusive about the peptide structure because of solvation-induced frequency shifts, but the 2D line shapes, anharmonic shifts, and lifetimes obtained from 2D SFG reveal that the peptide is largely α-helical and upright. Random coil residues are also observed, which do not themselves appear in SFG spectra due to their isotropic structural distribution, but which still absorb infrared light and so can be detected by cross-peaks in 2D SFG spectra. We discuss these results in the context of peptide design. Because of the similar way in which the spectra are collected, these 2D SFG spectra can be directly compared to 2D IR spectra, thereby enabling structural interpretations of surface-bound peptides and biomolecules based on the well-studied structure/2D IR spectra relationships established from soluble proteins.

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Year:  2014        PMID: 24372101      PMCID: PMC3956615          DOI: 10.1021/ja408682s

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  53 in total

1.  Sequence, structure, and function of peptide self-assembled monolayers.

Authors:  Ann K Nowinski; Fang Sun; Andrew D White; Andrew J Keefe; Shaoyi Jiang
Journal:  J Am Chem Soc       Date:  2012-03-22       Impact factor: 15.419

2.  Structural dynamics of a catalytic monolayer probed by ultrafast 2D IR vibrational echoes.

Authors:  Daniel E Rosenfeld; Zsolt Gengeliczki; Brian J Smith; T D P Stack; M D Fayer
Journal:  Science       Date:  2011-10-20       Impact factor: 47.728

3.  Residue-specific structural kinetics of proteins through the union of isotope labeling, mid-IR pulse shaping, and coherent 2D IR spectroscopy.

Authors:  Chris T Middleton; Ann Marie Woys; Sudipta S Mukherjee; Martin T Zanni
Journal:  Methods       Date:  2010-05-22       Impact factor: 3.608

4.  Investigating the specificity of peptide adsorption on gold using molecular dynamics simulations.

Authors:  Ana Vila Verde; Jacqueline M Acres; Janna K Maranas
Journal:  Biomacromolecules       Date:  2009-08-10       Impact factor: 6.988

5.  Transient 2D IR spectroscopy of charge injection in dye-sensitized nanocrystalline thin films.

Authors:  Wei Xiong; Jennifer E Laaser; Peerasak Paoprasert; Ryan A Franking; Robert J Hamers; Padma Gopalan; Martin T Zanni
Journal:  J Am Chem Soc       Date:  2009-12-23       Impact factor: 15.419

6.  Time-domain SFG spectroscopy using mid-IR pulse shaping: practical and intrinsic advantages.

Authors:  Jennifer E Laaser; Wei Xiong; Martin T Zanni
Journal:  J Phys Chem B       Date:  2011-03-02       Impact factor: 2.991

7.  Ultrafast vibrational dynamics of water at a charged interface revealed by two-dimensional heterodyne-detected vibrational sum frequency generation.

Authors:  Prashant Chandra Singh; Satoshi Nihonyanagi; Shoichi Yamaguchi; Tahei Tahara
Journal:  J Chem Phys       Date:  2012-09-07       Impact factor: 3.488

8.  Pushing the Sample-Size Limit of Infrared Vibrational Nanospectroscopy: From Monolayer toward Single Molecule Sensitivity.

Authors:  Xiaoji G Xu; Mathias Rang; Ian M Craig; Markus B Raschke
Journal:  J Phys Chem Lett       Date:  2012-06-25       Impact factor: 6.475

9.  Design criteria for engineering inorganic material-specific peptides.

Authors:  Beau R Peelle; Eric M Krauland; K Dane Wittrup; Angela M Belcher
Journal:  Langmuir       Date:  2005-07-19       Impact factor: 3.882

10.  Molecular impact of the membrane potential on the regulatory mechanism of proton transfer in sensory rhodopsin II.

Authors:  Xiue Jiang; Martin Engelhard; Kenichi Ataka; Joachim Heberle
Journal:  J Am Chem Soc       Date:  2010-08-11       Impact factor: 15.419

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  11 in total

Review 1.  Watching Proteins Wiggle: Mapping Structures with Two-Dimensional Infrared Spectroscopy.

Authors:  Ayanjeet Ghosh; Joshua S Ostrander; Martin T Zanni
Journal:  Chem Rev       Date:  2017-01-06       Impact factor: 60.622

2.  Two-dimensional infrared spectroscopy measures the structural dynamics of a self-assembled film only one molecule thick.

Authors:  Martin T Zanni
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-19       Impact factor: 11.205

3.  Two-dimensional sum-frequency generation (2D SFG) spectroscopy: summary of principles and its application to amyloid fiber monolayers.

Authors:  Ayanjeet Ghosh; Jia-Jung Ho; Arnaldo L Serrano; David R Skoff; Tianqi Zhang; Martin T Zanni
Journal:  Faraday Discuss       Date:  2015       Impact factor: 4.008

4.  Structural Characterization of Single-Stranded DNA Monolayers Using Two-Dimensional Sum Frequency Generation Spectroscopy.

Authors:  Jia-Jung Ho; David R Skoff; Ayanjeet Ghosh; Martin T Zanni
Journal:  J Phys Chem B       Date:  2015-08-10       Impact factor: 2.991

5.  Probing Site-Specific Structural Information of Peptides at Model Membrane Interface In Situ.

Authors:  Bei Ding; Afra Panahi; Jia-Jung Ho; Jennifer E Laaser; Charles L Brooks; Martin T Zanni; Zhan Chen
Journal:  J Am Chem Soc       Date:  2015-08-11       Impact factor: 15.419

6.  Molecular Structure and Modeling of Water-Air and Ice-Air Interfaces Monitored by Sum-Frequency Generation.

Authors:  Fujie Tang; Tatsuhiko Ohto; Shumei Sun; Jérémy R Rouxel; Sho Imoto; Ellen H G Backus; Shaul Mukamel; Mischa Bonn; Yuki Nagata
Journal:  Chem Rev       Date:  2020-03-06       Impact factor: 60.622

7.  The photochemical reaction of phenol becomes ultrafast at the air-water interface.

Authors:  Ryoji Kusaka; Satoshi Nihonyanagi; Tahei Tahara
Journal:  Nat Chem       Date:  2021-02-08       Impact factor: 24.427

8.  Developments and Ongoing Challenges for Analysis of Surface-Bound Proteins.

Authors:  Tobias Weidner; David G Castner
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2021-07-27       Impact factor: 12.400

Review 9.  New Insights from Sum Frequency Generation Vibrational Spectroscopy into the Interactions of Islet Amyloid Polypeptides with Lipid Membranes.

Authors:  Li Fu; Zhuguang Wang; Victor S Batista; Elsa C Y Yan
Journal:  J Diabetes Res       Date:  2015-11-30       Impact factor: 4.011

10.  Theoretical Sum Frequency Generation Spectroscopy of Peptides.

Authors:  Joshua K Carr; Lu Wang; Santanu Roy; James L Skinner
Journal:  J Phys Chem B       Date:  2014-09-24       Impact factor: 2.991

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