Literature DB >> 24368025

Why are diphenylalanine-based peptide nanostructures so rigid? Insights from first principles calculations.

Ido Azuri1, Lihi Adler-Abramovich, Ehud Gazit, Oded Hod, Leeor Kronik.   

Abstract

The diphenylalanine peptide self-assembles to form nanotubular structures of remarkable mechanical, piezolelectrical, electrical, and optical properties. The tubes are unexpectedly stiff, with reported Young's moduli of 19-27 GPa that were extracted using two independent techniques. Yet the physical basis for the remarkable rigidity is not fully understood. Here, we calculate the Young's modulus for bulk diphenylalanine peptide from first principles, using density functional theory with dispersive corrections. The calculation demonstrates that at least half of the stiffness of the material is the result of dispersive interactions. We further quantify the nature of various inter- and intramolecular interactions. We reveal that despite the porous nature of the lattice, there is an array of rigid nanotube backbones with interpenetrating "zipper-like" aromatic interlocks that result in stiffness and robustness. This presents a general strategy for the analysis of bioinspired functional materials and may pave the way for rational design of bionanomaterials.

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Year:  2014        PMID: 24368025     DOI: 10.1021/ja408713x

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

Review 1.  Reductionist Approach in Peptide-Based Nanotechnology.

Authors:  Ehud Gazit
Journal:  Annu Rev Biochem       Date:  2018-06-20       Impact factor: 23.643

Review 2.  Self-assembling peptide semiconductors.

Authors:  Kai Tao; Pandeeswar Makam; Ruth Aizen; Ehud Gazit
Journal:  Science       Date:  2017-11-17       Impact factor: 47.728

3.  Metabolite amyloids: a new paradigm for inborn error of metabolism disorders.

Authors:  Ehud Gazit
Journal:  J Inherit Metab Dis       Date:  2016-06-06       Impact factor: 4.982

4.  Two-dimensional honeycomb network through sequence-controlled self-assembly of oligopeptides.

Authors:  Sabine Abb; Ludger Harnau; Rico Gutzler; Stephan Rauschenbach; Klaus Kern
Journal:  Nat Commun       Date:  2016-01-12       Impact factor: 14.919

5.  van der Waals dispersion interactions in molecular materials: beyond pairwise additivity.

Authors:  Anthony M Reilly; Alexandre Tkatchenko
Journal:  Chem Sci       Date:  2015-03-30       Impact factor: 9.825

6.  Diphenylalanine-Derivative Peptide Assemblies with Increased Aromaticity Exhibit Metal-like Rigidity and High Piezoelectricity.

Authors:  Vasantha Basavalingappa; Santu Bera; Bin Xue; Joseph O'Donnell; Sarah Guerin; Pierre-Andre Cazade; Hui Yuan; Ehtsham Ul Haq; Christophe Silien; Kai Tao; Linda J W Shimon; Syed A M Tofail; Damien Thompson; Sofiya Kolusheva; Rusen Yang; Yi Cao; Ehud Gazit
Journal:  ACS Nano       Date:  2020-05-29       Impact factor: 15.881

7.  Mechanically rigid supramolecular assemblies formed from an Fmoc-guanine conjugated peptide nucleic acid.

Authors:  Vasantha Basavalingappa; Santu Bera; Bin Xue; Ido Azuri; Yiming Tang; Kai Tao; Linda J W Shimon; Michael R Sawaya; Sofiya Kolusheva; David S Eisenberg; Leeor Kronik; Yi Cao; Guanghong Wei; Ehud Gazit
Journal:  Nat Commun       Date:  2019-11-20       Impact factor: 14.919

8.  Stable and optoelectronic dipeptide assemblies for power harvesting.

Authors:  Kai Tao; Bin Xue; Qi Li; Wen Hu; Linda J W Shimon; Pandeeswar Makam; Mingsu Si; Xuehai Yan; Mingjun Zhang; Yi Cao; Rusen Yang; Junbai Li; Ehud Gazit
Journal:  Mater Today (Kidlington)       Date:  2019-04-22       Impact factor: 31.041

9.  Structural Polymorphism in a Self-Assembled Tri-Aromatic Peptide System.

Authors:  Noam Brown; Jiangtao Lei; Chendi Zhan; Linda J W Shimon; Lihi Adler-Abramovich; Guanghong Wei; Ehud Gazit
Journal:  ACS Nano       Date:  2018-03-23       Impact factor: 15.881

10.  Multiporous Supramolecular Microspheres for Artificial Photosynthesis.

Authors:  Kai Tao; Bin Xue; Samuel Frere; Inna Slutsky; Yi Cao; Wei Wang; Ehud Gazit
Journal:  Chem Mater       Date:  2017-05-03       Impact factor: 9.811

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