Literature DB >> 24360265

Influenza and respiratory syncytial virus detection in clinical specimens without nucleic acid extraction using FOCUS direct disc assay is substantially equivalent to the traditional methods and the FOCUS nucleic acid extraction-dependent RT-PCR assay.

Suresh B Selvaraju1, David Tierney2, Amy L Leber3, Anami Patel4, Amalia K Earley1, Dipeshkumar Jaiswal2, Marilyn A Menegus5.   

Abstract

In this study, we evaluated FOCUS diagnostic's Flu A/B & RSV direct kit (Direct Disc assay), designed to detect influenza (FLU) and respiratory syncytial viruses (RSV) directly in clinical specimens without nucleic acid extraction. This novel 'sample-to-answer', nucleic acid extraction-independent assay uses a unique disc to process, amplify, and detect viral targets in up to 8 specimens at a time. The performance of this assay for detecting FLU and RSV viruses was compared to the traditional methods (culture and/or direct florescent antibody testing) using 945 nasopharyngeal swab specimens. In addition, a total of 150 consecutive clinical specimens positive for FLU (FLU A=50, FLU B=50) or RSV (n=50) were tested in parallel using the novel Direct Disc assay and FOCUS diagnostic's nucleic acid extraction-dependent assay to assess their relative performance. Compared to the traditional methods, the overall (prospective+retrospective) positive/negative percent agreement was determined to be 96.6%/98.1% for FLU A, 98.4%/99.9% for FLU B, and 99.3%/98.8% for RSV. Compared to the nucleic acid extraction-dependent assay, the positive percent agreement was 90% (n=45/50) for FLU A, 92% (n=46/50) for FLU B, and 98% (n=49/50) for RSV. Overall, the Direct Disc assay showed good agreement with both traditional methods and nucleic acid extraction-dependent assay. Although we encountered some failures compared to the nucleic acid extraction-dependent assay, these limitations must be balanced against the substantial advantages of the extraction-free nature of this assay and rapid turnaround time.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Direct Disc assay; FOCUS nucleic acid extraction–dependent assay; Flu and RSV detection; Nasopharyngeal swab specimens; Simplexa

Mesh:

Substances:

Year:  2013        PMID: 24360265     DOI: 10.1016/j.diagmicrobio.2013.11.016

Source DB:  PubMed          Journal:  Diagn Microbiol Infect Dis        ISSN: 0732-8893            Impact factor:   2.803


  8 in total

1.  Comparison of Simplexa Flu A/B & RSV PCR with cytospin-immunofluorescence and laboratory-developed TaqMan PCR in predominantly adult hospitalized patients.

Authors:  Marie L Landry; David Ferguson
Journal:  J Clin Microbiol       Date:  2014-05-21       Impact factor: 5.948

Review 2.  Respiratory Syncytial Virus: Infection, Detection, and New Options for Prevention and Treatment.

Authors:  Cameron Griffiths; Steven J Drews; David J Marchant
Journal:  Clin Microbiol Rev       Date:  2017-01       Impact factor: 26.132

3.  Diagnostic tools for tackling febrile illness and enhancing patient management.

Authors:  Konstantinos Mitsakakis; Valérie D'Acremont; Sebastian Hin; Felix von Stetten; Roland Zengerle
Journal:  Microelectron Eng       Date:  2018-10-05       Impact factor: 2.523

4.  Comparison of three commercial RT-PCR systems for the detection of respiratory viruses.

Authors:  S A Butt; V P Maceira; M E McCallen; K A Stellrecht
Journal:  J Clin Virol       Date:  2014-08-18       Impact factor: 3.168

5.  Panther Fusion® Respiratory Virus Assays for the detection of influenza and other respiratory viruses.

Authors:  Kathleen A Stellrecht; Jesse L Cimino; Lisa I Wilson; Vincente P Maceira; Shafiq A Butt
Journal:  J Clin Virol       Date:  2019-11-09       Impact factor: 3.168

6.  Performance evaluation of direct fluorescent antibody, Focus Diagnostics Simplexa™ Flu A/B & RSV and multi-parameter customized respiratory Taqman® array card in immunocompromised patients.

Authors:  Deborah Steensels; Marijke Reynders; Patrick Descheemaeker; Martin D Curran; Frédérique Jacobs; Olivier Denis; Marie-Luce Delforge; Isabel Montesinos
Journal:  J Virol Methods       Date:  2017-03-30       Impact factor: 2.014

Review 7.  Point-of-care diagnostics for respiratory viral infections.

Authors:  Kerri Basile; Jen Kok; Dominic E Dwyer
Journal:  Expert Rev Mol Diagn       Date:  2017-12-26       Impact factor: 5.225

Review 8.  Molecular diagnosis of respiratory viruses.

Authors:  Lucy K Somerville; V Mala Ratnamohan; Dominic E Dwyer; Jen Kok
Journal:  Pathology       Date:  2015-04       Impact factor: 5.306

  8 in total

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