Literature DB >> 24353039

Characterization of a novel cold-active esterase isolated from swamp sediment metagenome.

Sohyeon Seo1, Young-Seok Lee, Sang-Hong Yoon, Soo-Jin Kim, Jae Youl Cho, Bum-Soo Hahn, Bon-Sung Koo, Chang-Muk Lee.   

Abstract

A functional screen of a metagenomic library from "Upo" swamp sediment in Korea identified a gene EstL28, the product of which displayed lipolytic properties on a tributyrin-supplemented medium. The EstL28 sequence encodes a 290 amino acid protein (designated as EstL28), with a predicted molecular weight of 31.3 kDa. The encoded EstL28 protein exhibited the highest sequence similarity (45 %) to a hydrolase found in Streptococcus sanguinis. Phylogenetic analysis indicated that EstL28 belongs to a currently uncharacterized family of esterases. Within the conserved α/β-hydrolase 6 domain, the EstL28 retains the catalytic triad Ser₁₀₃-Asp₂₄₈-His₂₆₈ that is typical of esterases. The Ser103 residue in the catalytic triad is located in the consensus pentapeptide motif GXSXG. The purified EstL28 enzyme worked optimally at 35 °C and pH 8.5 and remained stable at temperatures lower than 20 °C. The catalytic activity of EstL28 was maximal with p-nitrophenyl butyrate, indicating that it was an esterase. This enzyme also exhibited stable activity in the presence of methanol, ethanol, isopropanol, and dimethyl sulfoxide. Therefore, the level of stability in organic solvents and cold temperature suggests that EstL28 has potential for many biotechnological applications.

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Year:  2013        PMID: 24353039     DOI: 10.1007/s11274-013-1496-9

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  27 in total

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Journal:  Appl Environ Microbiol       Date:  2008-10-17       Impact factor: 4.792

Review 4.  Cold active microbial lipases: some hot issues and recent developments.

Authors:  Babu Joseph; Pramod W Ramteke; George Thomas
Journal:  Biotechnol Adv       Date:  2008-05-18       Impact factor: 14.227

5.  The art and design of functional metagenomic screens.

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Journal:  World J Microbiol Biotechnol       Date:  2011-07-01       Impact factor: 3.312

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9.  Screening and characterization of an enzyme with beta-glucosidase activity from environmental DNA.

Authors:  Soo-Jin Kim; Chang-Muk Lee; Min-Young Kim; Yun-Soo Yeo; Sang-Hong Yoon; Han-Cheol Kang; Bon-Sung Koo
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  5 in total

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2.  Metagenomic Screening for Lipolytic Genes Reveals an Ecology-Clustered Distribution Pattern.

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Review 3.  Improved cultivation and metagenomics as new tools for bioprospecting in cold environments.

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Journal:  Extremophiles       Date:  2014-11-16       Impact factor: 2.395

4.  A novel cold-adapted and highly salt-tolerant esterase from Alkalibacterium sp. SL3 from the sediment of a soda lake.

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Journal:  Sci Rep       Date:  2016-02-26       Impact factor: 4.379

5.  Est16, a New Esterase Isolated from a Metagenomic Library of a Microbial Consortium Specializing in Diesel Oil Degradation.

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  5 in total

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