Literature DB >> 24351090

DNA origami compliant nanostructures with tunable mechanical properties.

Lifeng Zhou1, Alexander E Marras, Hai-Jun Su, Carlos E Castro.   

Abstract

DNA origami enables fabrication of precise nanostructures by programming the self-assembly of DNA. While this approach has been used to make a variety of complex 2D and 3D objects, the mechanical functionality of these structures is limited due to their rigid nature. We explore the fabrication of deformable, or compliant, objects to establish a framework for mechanically functional nanostructures. This compliant design approach is used in macroscopic engineering to make devices including sensors, actuators, and robots. We build compliant nanostructures by utilizing the entropic elasticity of single-stranded DNA (ssDNA) to locally bend bundles of double-stranded DNA into bent geometries whose curvature and mechanical properties can be tuned by controlling the length of ssDNA strands. We demonstrate an ability to achieve a wide range of geometries by adjusting a few strands in the nanostructure design. We further developed a mechanical model to predict both geometry and mechanical properties of our compliant nanostructures that agrees well with experiments. Our results provide a basis for the design of mechanically functional DNA origami devices and materials.

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Year:  2013        PMID: 24351090     DOI: 10.1021/nn405408g

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  21 in total

1.  Programmable motion of DNA origami mechanisms.

Authors:  Alexander E Marras; Lifeng Zhou; Hai-Jun Su; Carlos E Castro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-05       Impact factor: 11.205

Review 2.  Engineering structure and function using thermoresponsive biopolymers.

Authors:  Martha K Pastuszka; J Andrew MacKay
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2015-06-26

Review 3.  DNA origami nano-mechanics.

Authors:  Jiahao Ji; Deepak Karna; Hanbin Mao
Journal:  Chem Soc Rev       Date:  2021-11-01       Impact factor: 54.564

4.  Probing the Mechanical Properties of DNA Nanostructures with Metadynamics.

Authors:  Will T Kaufhold; Wolfgang Pfeifer; Carlos E Castro; Lorenzo Di Michele
Journal:  ACS Nano       Date:  2022-05-17       Impact factor: 18.027

5.  DNA Origami Post-Processing by CRISPR-Cas12a.

Authors:  Qiancheng Xiong; Chun Xie; Zhao Zhang; Longfei Liu; John T Powell; Qi Shen; Chenxiang Lin
Journal:  Angew Chem Int Ed Engl       Date:  2020-01-28       Impact factor: 15.336

6.  Daunorubicin-Loaded DNA Origami Nanostructures Circumvent Drug-Resistance Mechanisms in a Leukemia Model.

Authors:  Patrick D Halley; Christopher R Lucas; Emily M McWilliams; Matthew J Webber; Randy A Patton; Comert Kural; David M Lucas; John C Byrd; Carlos E Castro
Journal:  Small       Date:  2015-11-19       Impact factor: 13.281

7.  Double- to Single-Strand Transition Induces Forces and Motion in DNA Origami Nanostructures.

Authors:  Fatih N Gür; Susanne Kempter; Florian Schueder; Christoph Sikeler; Maximilian J Urban; Ralf Jungmann; Philipp C Nickels; Tim Liedl
Journal:  Adv Mater       Date:  2021-08-01       Impact factor: 30.849

8.  Regulation at a distance of biomolecular interactions using a DNA origami nanoactuator.

Authors:  Yonggang Ke; Travis Meyer; William M Shih; Gaetan Bellot
Journal:  Nat Commun       Date:  2016-03-18       Impact factor: 14.919

9.  Mechanical properties of DNA origami nanoassemblies are determined by Holliday junction mechanophores.

Authors:  Prakash Shrestha; Tomoko Emura; Deepak Koirala; Yunxi Cui; Kumi Hidaka; William J Maximuck; Masayuki Endo; Hiroshi Sugiyama; Hanbin Mao
Journal:  Nucleic Acids Res       Date:  2016-07-07       Impact factor: 16.971

10.  Conformational Control of DNA Origami by DNA Oligomers, Intercalators and UV Light.

Authors:  Ruixin Li; Haorong Chen; Hyeongwoon Lee; Jong Hyun Choi
Journal:  Methods Protoc       Date:  2021-05-22
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