Literature DB >> 24351060

The selectivity of Vibrio cholerae H-NOX for gaseous ligands follows the "sliding scale rule" hypothesis. Ligand interactions with both ferrous and ferric Vc H-NOX.

Gang Wu1, Wen Liu, Vladimir Berka, Ah-lim Tsai.   

Abstract

Vc H-NOX (or VCA0720) is an H-NOX (heme-nitric oxide and oxygen binding) protein from facultative aerobic bacterium Vibrio cholerae. It shares significant sequence homology with soluble guanylyl cyclase (sGC), a NO sensor protein commonly found in animals. Similar to sGC, Vc H-NOX binds strongly to NO and CO with affinities of 0.27 nM and 0.77 μM, respectively, but weakly to O2. When positioned on a "sliding scale" plot [Tsai, A.-l., et al. (2012) Biochemistry 51, 172-186], the line connecting log K(D)(NO) and log K(D)(CO) of Vc H-NOX can almost be superimposed with that of Ns H-NOX. Therefore, the measured affinities and kinetic parameters of gaseous ligands to Vc H-NOX provide more evidence to validate the "sliding scale rule" hypothesis. Like sGC, Vc H-NOX binds NO in multiple steps, forming first a six-coordinate heme-NO complex at a rate of 1.1 × 10(9) M(-1) s(-1), and then converts to a five-coordinate heme-NO complex at a rate that is also dependent on NO concentration. Although the formation of oxyferrous Vc H-NOX cannot be detected at a normal atmospheric oxygen level, ferrous Vc H-NOX is oxidized to the ferric form at a rate of 0.06 s(-1) when mixed with O2. Ferric Vc H-NOX exists as a mixture of high- and low-spin states and is influenced by binding to different ligands. Characterization of both ferric and ferrous Vc H-NOX and their complexes with various ligands lays the foundation for understanding the possible dual roles in gas and redox sensing of Vc H-NOX.

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Year:  2013        PMID: 24351060      PMCID: PMC3999706          DOI: 10.1021/bi401408x

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  46 in total

1.  Nitric oxide synthase generates superoxide and nitric oxide in arginine-depleted cells leading to peroxynitrite-mediated cellular injury.

Authors:  Y Xia; V L Dawson; T M Dawson; S H Snyder; J L Zweier
Journal:  Proc Natl Acad Sci U S A       Date:  1996-06-25       Impact factor: 11.205

Review 2.  Nitric oxide synthases: properties and catalytic mechanism.

Authors:  O W Griffith; D J Stuehr
Journal:  Annu Rev Physiol       Date:  1995       Impact factor: 19.318

3.  Effects of dipole-dipole interactions on microwave progressive power saturation of radicals in proteins.

Authors:  C Galli; J B Innes; D J Hirsh; G W Brudvig
Journal:  J Magn Reson B       Date:  1996-03

4.  N.m.r., e.p.r. and magnetic-c.d. studies of cytochrome f. Identity of the haem axial ligands.

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Journal:  Biochem J       Date:  1988-12-01       Impact factor: 3.857

5.  Low temperature EPR and MCD studies on cytochrome b-558 of the Bacillus subtilis succinate: quinone oxidoreductase indicate bis-histidine coordination of the heme iron.

Authors:  H Fridén; M R Cheesman; L Hederstedt; K K Andersson; A J Thomson
Journal:  Biochim Biophys Acta       Date:  1990-11-15

6.  Electron-paramagnetic-resonance spectroscopy of Bacillus subtilis cytochrome b558 in Escherichia coli membranes and in succinate dehydrogenase complex from Bacillus subtilis membranes.

Authors:  L Hederstedt; K K Andersson
Journal:  J Bacteriol       Date:  1986-08       Impact factor: 3.490

7.  Primary processes in heme-based sensor proteins.

Authors:  Ursula Liebl; Jean-Christophe Lambry; Marten H Vos
Journal:  Biochim Biophys Acta       Date:  2013-02-26

8.  Temperature- and pH-dependent changes in the coordination sphere of the heme c group in the model peroxidase N alpha-acetyl microperoxidase-8.

Authors:  J S Wang; A L Tsai; J Heldt; G Palmer; H E Van Wart
Journal:  J Biol Chem       Date:  1992-08-05       Impact factor: 5.157

9.  Heme coordination of prostaglandin H synthase.

Authors:  A L Tsai; R J Kulmacz; J S Wang; Y Wang; H E Van Wart; G Palmer
Journal:  J Biol Chem       Date:  1993-04-25       Impact factor: 5.157

10.  Alteration of axial coordination by protein engineering in myoglobin. Bisimidazole ligation in the His64-->Val/Val68-->His double mutant.

Authors:  Y Dou; S J Admiraal; M Ikeda-Saito; S Krzywda; A J Wilkinson; T Li; J S Olson; R C Prince; I J Pickering; G N George
Journal:  J Biol Chem       Date:  1995-07-07       Impact factor: 5.157

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  12 in total

1.  Heme-independent Redox Sensing by the Heme-Nitric Oxide/Oxygen-binding Protein (H-NOX) from Vibrio cholerae.

Authors:  Roma Mukhopadyay; Nilusha Sudasinghe; Tanner Schaub; Erik T Yukl
Journal:  J Biol Chem       Date:  2016-06-29       Impact factor: 5.157

Review 2.  Bacterial Haemoprotein Sensors of NO: H-NOX and NosP.

Authors:  Bezalel Bacon; Lisa-Marie Nisbett; Elizabeth Boon
Journal:  Adv Microb Physiol       Date:  2017-03-18       Impact factor: 3.517

3.  Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins.

Authors:  Mark A Herzik; Rohan Jonnalagadda; John Kuriyan; Michael A Marletta
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-24       Impact factor: 11.205

4.  Discovery of a Nitric Oxide Responsive Quorum Sensing Circuit in Vibrio cholerae.

Authors:  Sajjad Hossain; Ilana Heckler; Elizabeth M Boon
Journal:  ACS Chem Biol       Date:  2018-08-03       Impact factor: 5.100

Review 5.  Bacterial Heme-Based Sensors of Nitric Oxide.

Authors:  Dominique E Williams; Lisa-Marie Nisbett; Bezalel Bacon; Elizabeth Boon
Journal:  Antioxid Redox Signal       Date:  2017-09-28       Impact factor: 8.401

6.  Gaseous ligand selectivity of the H-NOX sensor protein from Shewanella oneidensis and comparison to those of other bacterial H-NOXs and soluble guanylyl cyclase.

Authors:  Gang Wu; Wen Liu; Vladimir Berka; Ah-Lim Tsai
Journal:  Biochimie       Date:  2017-06-26       Impact factor: 4.079

Review 7.  A new paradigm for gaseous ligand selectivity of hemoproteins highlighted by soluble guanylate cyclase.

Authors:  Gang Wu; Emil Martin; Vladimir Berka; Wen Liu; Elsa D Garcin; Ah-Lim Tsai
Journal:  J Inorg Biochem       Date:  2020-10-16       Impact factor: 4.155

8.  H-NOX from Clostridium botulinum, like H-NOX from Thermoanaerobacter tengcongensis, Binds Oxygen but with a Less Stable Oxyferrous Heme Intermediate.

Authors:  Gang Wu; Wen Liu; Vladimir Berka; Ah-Lim Tsai
Journal:  Biochemistry       Date:  2015-11-25       Impact factor: 3.162

9.  Influences of the heme-lysine crosslink in cytochrome P460 over redox catalysis and nitric oxide sensitivity.

Authors:  Avery C Vilbert; Jonathan D Caranto; Kyle M Lancaster
Journal:  Chem Sci       Date:  2017-11-07       Impact factor: 9.825

10.  Structure and reactivity of chlorite dismutase nitrosyls.

Authors:  Zachary Geeraerts; Alisa K Heskin; Jennifer DuBois; Kenton R Rodgers; Gudrun S Lukat-Rodgers
Journal:  J Inorg Biochem       Date:  2020-07-26       Impact factor: 4.155

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