Literature DB >> 24350339

Reply to Subramaniam, van Heel, and Henderson: Validity of the cryo-electron microscopy structures of the HIV-1 envelope glycoprotein complex.

Youdong Mao, Luis R Castillo-Menendez, Joseph G Sodroski.   

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Year:  2013        PMID: 24350339      PMCID: PMC3831492          DOI: 10.1073/pnas.1316666110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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  20 in total

1.  Resolution measurement in structures derived from single particles.

Authors:  N Grigorieff
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-10

2.  An approach to examining model dependence in EM reconstructions using cross-validation.

Authors:  Tanvir R Shaikh; Reiner Hegerl; Joachim Frank
Journal:  J Struct Biol       Date:  2003-05       Impact factor: 2.867

3.  Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy.

Authors:  Peter B Rosenthal; Richard Henderson
Journal:  J Mol Biol       Date:  2003-10-31       Impact factor: 5.469

4.  Structure of a V3-containing HIV-1 gp120 core.

Authors:  Chih-chin Huang; Min Tang; Mei-Yun Zhang; Shahzad Majeed; Elizabeth Montabana; Robyn L Stanfield; Dimiter S Dimitrov; Bette Korber; Joseph Sodroski; Ian A Wilson; Richard Wyatt; Peter D Kwong
Journal:  Science       Date:  2005-11-11       Impact factor: 47.728

5.  Maximum-likelihood multi-reference refinement for electron microscopy images.

Authors:  Sjors H W Scheres; Mikel Valle; Rafael Nuñez; Carlos O S Sorzano; Roberto Marabini; Gabor T Herman; Jose-Maria Carazo
Journal:  J Mol Biol       Date:  2005-04-22       Impact factor: 5.469

6.  Molecular architecture of the uncleaved HIV-1 envelope glycoprotein trimer.

Authors:  Youdong Mao; Liping Wang; Christopher Gu; Alon Herschhorn; Anik Désormeaux; Andrés Finzi; Shi-Hua Xiang; Joseph G Sodroski
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-11       Impact factor: 11.205

7.  Structure of trimeric HIV-1 envelope glycoproteins.

Authors:  Sriram Subramaniam
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-08       Impact factor: 11.205

8.  Finding trimeric HIV-1 envelope glycoproteins in random noise.

Authors:  Marin van Heel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-08       Impact factor: 11.205

9.  A maximum-likelihood approach to single-particle image refinement.

Authors:  F J Sigworth
Journal:  J Struct Biol       Date:  1998       Impact factor: 2.867

10.  Avoiding the pitfalls of single particle cryo-electron microscopy: Einstein from noise.

Authors:  Richard Henderson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-08       Impact factor: 11.205

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  13 in total

1.  Single-particle electron microscopy in the study of membrane protein structure.

Authors:  Rita De Zorzi; Wei Mi; Maofu Liao; Thomas Walz
Journal:  Microscopy (Oxf)       Date:  2015-10-15       Impact factor: 1.571

2.  The revolution will not be crystallized: a new method sweeps through structural biology.

Authors:  Ewen Callaway
Journal:  Nature       Date:  2015-09-10       Impact factor: 49.962

3.  Crystal structure of a soluble cleaved HIV-1 envelope trimer.

Authors:  Jean-Philippe Julien; Albert Cupo; Devin Sok; Robyn L Stanfield; Dmitry Lyumkis; Marc C Deller; Per-Johan Klasse; Dennis R Burton; Rogier W Sanders; John P Moore; Andrew B Ward; Ian A Wilson
Journal:  Science       Date:  2013-10-31       Impact factor: 47.728

4.  Complete dissociation of the HIV-1 gp41 ectodomain and membrane proximal regions upon phospholipid binding.

Authors:  Julien Roche; John M Louis; Annie Aniana; Rodolfo Ghirlando; Ad Bax
Journal:  J Biomol NMR       Date:  2015-01-29       Impact factor: 2.835

5.  HIV-1 envelope protein gp41: an NMR study of dodecyl phosphocholine embedded gp41 reveals a dynamic prefusion intermediate conformation.

Authors:  Nils-Alexander Lakomek; Joshua D Kaufman; Stephen J Stahl; Paul T Wingfield
Journal:  Structure       Date:  2014-08-14       Impact factor: 5.006

6.  Comparison of Uncleaved and Mature Human Immunodeficiency Virus Membrane Envelope Glycoprotein Trimers.

Authors:  Luis R Castillo-Menendez; Kristen Witt; Nicole Espy; Amy Princiotto; Navid Madani; Beatriz Pacheco; Andrés Finzi; Joseph Sodroski
Journal:  J Virol       Date:  2018-05-29       Impact factor: 5.103

7.  Validation of 3D EM Reconstructions: The Phantom in the Noise.

Authors:  J Bernard Heymann
Journal:  AIMS Biophys       Date:  2015

8.  Particle alignment reliability in single particle electron cryomicroscopy: a general approach.

Authors:  J Vargas; J Otón; R Marabini; J M Carazo; C O S Sorzano
Journal:  Sci Rep       Date:  2016-02-22       Impact factor: 4.379

9.  Morphology and ultrastructure of retrovirus particles.

Authors:  Wei Zhang; Sheng Cao; Jessica L Martin; Joachim D Mueller; Louis M Mansky
Journal:  AIMS Biophys       Date:  2015-08-18

Review 10.  Dynamic Viral Glycoprotein Machines: Approaches for Probing Transient States That Drive Membrane Fusion.

Authors:  Natalie K Garcia; Kelly K Lee
Journal:  Viruses       Date:  2016-01-11       Impact factor: 5.048

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