| Literature DB >> 24349007 |
Christopher D Pilcher1, Brian Louie2, Shelley Facente3, Sheila Keating4, John Hackett5, Ana Vallari5, Chris Hall6, Teri Dowling7, Michael P Busch4, Jeffrey D Klausner8, Frederick M Hecht1, Sally Liska2, Mark W Pandori2.
Abstract
BACKGROUND: Current laboratory and point-of-care tests for HIV detect different analytes and use different sample types. Some have fast turnaround times (<1 hour). We investigated how HIV test choice could impact case finding by testing programs.Entities:
Mesh:
Substances:
Year: 2013 PMID: 24349007 PMCID: PMC3861178 DOI: 10.1371/journal.pone.0080629
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Clinical Testing Algorithm, San Francisco Targeted Testing Programs 2003–2008 (adapted from [6]).
Identification of Acute (HIV Antibody Negative or Indeterminate) and Established (Confirmed HIV Antibody Positive) HIV Infections by Targeted Testing Programs in San Francisco, 2003–2008.
|
|
|
| ||||||||
| Program | Testing | N | n | (% prev) | n | % (of cases) | % (of testers) | n | % (of cases) | % (of testers) |
|
| 21234 | 761 | 3.6% | 58 | 7.6% | 0.3% | 703 | 92.4% | 3.3% | |
| Sex Worker | RT, IA | 1110 | 16 | 1.4% | 0 | 0.0% | 0.0% | 16 | 100.0% | 1.4% |
| nPEP | IA | 989 | 20 | 2.0% | 8 | 40.0% | 0.8% | 12 | 60.0% | 1.2% |
| STD Clinic | IA | 13321 | 350 | 2.6% | 23 | 6.6% | 0.2% | 327 | 93.4% | 2.5% |
| High Risk MSM | RT | 5641 | 355 | 6.3% | 25 | 7.0% | 0.4% | 330 | 93.0% | 5.9% |
| Partner Services | RT, IA | 173 | 20 | 11.6% | 2 | 10.0% | 1.2% | 18 | 90.0% | 10.4% |
|
| IA | 1114 | 845 | 75.9% | 90 | 10.7% | 8.1% | 755 | 89.3% | 67.8% |
|
| 22348 | 1606 | 7.2% | 148 | 9.2% | 0.7% | 1458 | 90.8% | 6.5% | |
= rapid test; IA = immunoassay. RT
Include results from the acute HIV screening program results for years 1998 through 2008.
Performance Characteristics of Four HIV Antibody Screening Tests Used by San Francisco Targeted Testing Programs, 2003–2008.
| Screening Test Used | Patient Tested | Actual Case Identification-n (%) | False+ | Actual Performance Estimates-% (95% confidence interval) | |||||
| Acute HIV | Established HIV | All HIV | Sensitivity | Specificity | PPV | NPV | |||
| Oraquick Advance (Oral Fluid RT) | 6446 | 0/11 (0.0) | 110/116 (94.8) | 110/127 (86.6) | 5 | 86.6 (79.4, 92.0) | 99.9 (99.8, 100.0) | 95.7 (90.1, 98.6) | 99.7 (99.6, 99.8) |
| Oraquick Advance (Fingerstick blood RT) | 8127 | 0/18 (0.0) | 226/228 (99.1) | 226/246 (91.9) | 1 | 91.9 (87.7, 95.0) | 100.0 (99.9, 100.0) | 99.6 (97.6, 100.0) | 99.7 (99.6, 99.8) |
| Vironostika HIV-1 Microelisa | 2860 | 0/22 (0.0) | 262/262 (100.0) | 262/284 (92.3) | 0 | 92.3 (88.5, 95.1) | 100.0 (99.9, 100.0) | 100.0 (98.6,100.0) | 99.2 (98.7, 99.5) |
| Genetic Systems HIV 1/2 Plus O | 3801 | 3/7 (27.3) | 97/97 (100.0) | 100/104 (96.2) | 0 | 96.2 (90.4, 98.9) | 100.0 (99.9, 100.0) | 100.0 (96.4, 100.0) | 99.9 (99.7, 100.0) |
| All Clinical Testing | 21234 | 4/58 (6.9) | 694/703 (98.7) | 698/761 (91.7) | 6 | 91.7 (89.5, 93.6) | 100.0 (99.9, 100.0) | 99.1 (98.2, 99.7) | 99.7 (99.6, 99.8) |
= rapid test; IA = immunoassay. RT
Ability of Tests to Detect Acute HIV Cases, and All HIV Cases: San Francisco Targeted Testing Programs, 2003–2008.
| Test Name | Type | Format | Detection of HIV infection among Ab-/RNA+specimens (n = 66 cases) | Estimate of potential for case finding by each test | ||||
|
|
|
| ||||||
| Test+ | % | Test+ | % | Test+ | % (95 CI) | |||
| ARCHITECT HIV Ag/Ab Combo | Ag-Ab | Rapid lab IA | 48/55 | 87.3 | 6/6 | 100.0 | 754/761 | 99.1 (91.1, 100.0) |
| Determine HIV-1/2 Ag/Ab Combo | Ag-Ab | POC RT | 31/57 | 54.4 | 8/8 | 100.0 | 735/761 | 96.6 (84.7, 100.0) |
| 18 Ab+ | 31.5 | |||||||
| 13 Ag-only+ | 22.8 | |||||||
| Genetic Systems HIV-1/2 Plus O | Ab | Lab IA | 20/58 | 34.5 | 8/8 | 100.0 | 723/761 | 95.0 (83.1, 100.0) |
| Unigold Recombigen HIV-1 | Ab | POC RT | 14/54 | 25.9 | 8/8 | 100.0 | 718/761 | 94.3 (82.4, 100.0) |
| Multispot HIV ½ | Ab | POC RT | 11/58 | 19.0 | 8/8 | 100.0 | 714/761 | 93.8 (82.9, 100.0) |
| Oraquick Advance (on blood plasma) | Ab | POC RT | 3/58 | 5.2 | 8/8 | 100.0 | 706/761 | 92.8 (88.2, 97.3) |
| Clearview Stat-Pak | Ab | POC RT | 3/58 | 5.2 | 8/8 | 100.0 | 706/761 | 92.8 (83.8,100.0) |
| Vironostika HIV-1 Microelisa System | Ab | Lab IA | 0/30 | 0.0 | 8/8 | 100.0 | 703/761 | 92.4 (89.0, 95.8) |
| rLAV HIV 1/2 | Ab | Lab IA | 0/24 | 0.0 | 6/8 | 75.0 | 701/761 | 92.1 (78.6, 100.0) |
| Genetic Systems HIV WB (any bands positive) | Ab | Western blot | 16/58 | 27.6 | 8/8 | 100.0 | 719/761 | 94.4 (87.9, 100.0) |
= immunoassay. RT = rapid test. POC = point-of-care. For each test, its potential for case finding was calculated by assuming it would detect the 695 specimens which were positive by the original HIV antibody screening assay, and also fully positive on supplemental Western blot testing. These estimates thus represent the maximum clinical sensitivity that could be expected were the assay to be used in San Francisco. For specimens that were negative in the original screening assay but reactive on pooled RNA testing, the ability of each test to detect these specimens was calculated separately for the 58 Western blot-negative or -indeterminate and for the 8 Western blot positive specimens, based on the test's observed performance on specimens tested in that category. When not all specimens in a category were available for testing, the proportion of tested cases detected was multiplied by the total number of cases in the category to obtain the estimate of potential case finding. IA
“acute” specimens that were reactive on the blood plasma sample, two had been negative on a screening test of fingerstick whole blood, using the same Oraquick Advance test. Actual performance estimates for Oraquick fingerstick blood testing are reported in Table 2. among the three
Figure 2Estimated Impact of Test Performance on Detection of Acute (black) and Established (grey) HIV Infection Cases in San Francisco Targeted Testing Programs.
For all blood assays, figures shown represent results shown in Table 3. For the Oraquick Advance assay, oral fluid results (Table 2) are not shown.