Literature DB >> 24342084

Ancient signals: comparative genomics of green plant CDPKs.

Louis-Philippe Hamel1, Jen Sheen2, Armand Séguin3.   

Abstract

Calcium-dependent protein kinases (CDPKs) are multifunctional proteins that combine calcium-binding and signaling capabilities within a single gene product. This unique versatility enables multiple plant biological processes to be controlled, including developmental programs and stress responses. The genome of flowering plants typically encodes around 30 CDPK homologs that cluster in four conserved clades. In this review, we take advantage of the recent availability of genome sequences from green algae and early land plants to examine how well the previously described CDPK family from angiosperms compares to the broader evolutionary states associated with early diverging green plant lineages. Our analysis suggests that the current architecture of the CDPK family was shaped during the colonization of the land by plants, whereas CDPKs from ancestor green algae have continued to evolve independently. Crown
Copyright © 2013. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  CDPKs; calcium signaling; evolution; green plant lineages

Mesh:

Substances:

Year:  2013        PMID: 24342084      PMCID: PMC3932502          DOI: 10.1016/j.tplants.2013.10.009

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  81 in total

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Authors:  M L Martín; L Busconi
Journal:  Plant J       Date:  2000-11       Impact factor: 6.417

2.  Molecular evolution of calmodulin-like domain protein kinases (CDPKs) in plants and protists.

Authors:  X S Zhang; J H Choi
Journal:  J Mol Evol       Date:  2001-09       Impact factor: 2.395

3.  Evidence for differing roles for each lobe of the calmodulin-like domain in a calcium-dependent protein kinase.

Authors:  John Christodoulou; Anders Malmendal; Jeffrey F Harper; Walter J Chazin
Journal:  J Biol Chem       Date:  2004-05-04       Impact factor: 5.157

4.  A molecular timeline for the origin of photosynthetic eukaryotes.

Authors:  Hwan Su Yoon; Jeremiah D Hackett; Claudia Ciniglia; Gabriele Pinto; Debashish Bhattacharya
Journal:  Mol Biol Evol       Date:  2004-02-12       Impact factor: 16.240

5.  LeCPK1, a calcium-dependent protein kinase from tomato. Plasma membrane targeting and biochemical characterization.

Authors:  Frank Rutschmann; Urs Stalder; Markus Piotrowski; Claudia Oecking; Andreas Schaller
Journal:  Plant Physiol       Date:  2002-05       Impact factor: 8.340

6.  Conformational changes in the Ca2+-regulatory region from soybean calcium-dependent protein kinase-alpha: fluorescence resonance energy transfer studies.

Authors:  Aalim M Weljie; Kindal M Robertson; Hans J Vogel
Journal:  J Biol Chem       Date:  2003-08-26       Impact factor: 5.157

7.  Unexpected structure of the Ca2+-regulatory region from soybean calcium-dependent protein kinase-alpha.

Authors:  Aalim M Weljie; Hans J Vogel
Journal:  J Biol Chem       Date:  2004-05-20       Impact factor: 5.157

Review 8.  Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family.

Authors:  Shu-Hua Cheng; Matthew R Willmann; Huei-Chi Chen; Jen Sheen
Journal:  Plant Physiol       Date:  2002-06       Impact factor: 8.340

9.  A molecular timescale of eukaryote evolution and the rise of complex multicellular life.

Authors:  S Blair Hedges; Jaime E Blair; Maria L Venturi; Jason L Shoe
Journal:  BMC Evol Biol       Date:  2004-01-28       Impact factor: 3.260

10.  The Arabidopsis CDPK-SnRK superfamily of protein kinases.

Authors:  Estelle M Hrabak; Catherine W M Chan; Michael Gribskov; Jeffrey F Harper; Jung H Choi; Nigel Halford; Jorg Kudla; Sheng Luan; Hugh G Nimmo; Michael R Sussman; Martine Thomas; Kay Walker-Simmons; Jian-Kang Zhu; Alice C Harmon
Journal:  Plant Physiol       Date:  2003-06       Impact factor: 8.340

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  51 in total

Review 1.  The Cytoskeleton and Its Regulation by Calcium and Protons.

Authors:  Peter K Hepler
Journal:  Plant Physiol       Date:  2016-01       Impact factor: 8.340

2.  Genome-wide analysis and expression of the calcium-dependent protein kinase gene family in cucumber.

Authors:  Xuewen Xu; Min Liu; Lu Lu; Min He; Wenqin Qu; Qiang Xu; Xiaohua Qi; Xuehao Chen
Journal:  Mol Genet Genomics       Date:  2015-02-17       Impact factor: 3.291

3.  Genome-wide analysis of calcium-dependent protein kinases and their expression patterns in response to herbivore and wounding stresses in soybean.

Authors:  Hailun Liu; Zhijun Che; Xuanrui Zeng; Xiaoqiong Zhou; Hélder Manuel Sitoe; Hui Wang; Deyue Yu
Journal:  Funct Integr Genomics       Date:  2016-05-14       Impact factor: 3.410

4.  TOUCH 3 and CALMODULIN 1/4/6 cooperate with calcium-dependent protein kinases to trigger calcium-dependent activation of CAM-BINDING PROTEIN 60-LIKE G and regulate fungal resistance in plants.

Authors:  Lifan Sun; Jun Qin; Xiaoyun Wu; Jinghan Zhang; Jie Zhang
Journal:  Plant Cell       Date:  2022-09-27       Impact factor: 12.085

5.  Ca2+-dependent phosphorylation of NRAMP1 by CPK21 and CPK23 facilitates manganese uptake and homeostasis in Arabidopsis.

Authors:  Dali Fu; Zhenqian Zhang; Lukas Wallrad; Zhangqing Wang; Stefanie Höller; ChuanFeng Ju; Ina Schmitz-Thom; Panpan Huang; Lei Wang; Edgar Peiter; Jörg Kudla; Cun Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2022-09-26       Impact factor: 12.779

6.  Direct phosphorylation and activation of a mitogen-activated protein kinase by a calcium-dependent protein kinase in rice.

Authors:  Kabin Xie; Jianping Chen; Qin Wang; Yinong Yang
Journal:  Plant Cell       Date:  2014-07-17       Impact factor: 11.277

7.  Two calcium-dependent protein kinases from Chlamydomonas reinhardtii are transcriptionally regulated by nutrient starvation.

Authors:  Mustafa J Motiwalla; Marilyn P Sequeira; Jacinta S D'Souza
Journal:  Plant Signal Behav       Date:  2014-01-29

8.  Calcium-dependent protein kinase (CDPK) and CDPK-related kinase (CRK) gene families in tomato: genome-wide identification and functional analyses in disease resistance.

Authors:  Ji-Peng Wang; You-Ping Xu; Jean-Pierre Munyampundu; Tian-Yu Liu; Xin-Zhong Cai
Journal:  Mol Genet Genomics       Date:  2015-10-31       Impact factor: 3.291

9.  Phosphorylation-dependent subfunctionalization of the calcium-dependent protein kinase CPK28.

Authors:  Melissa Bredow; Kyle W Bender; Alexandra Johnson Dingee; Danalyn R Holmes; Alysha Thomson; Danielle Ciren; Cailun A S Tanney; Katherine E Dunning; Marco Trujillo; Steven C Huber; Jacqueline Monaghan
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-11       Impact factor: 11.205

Review 10.  Phosphorylation Site Motifs in Plant Protein Kinases and Their Substrates.

Authors:  Lin Xi; Zhaoxia Zhang; Sandra Herold; Sarah Kassem; Xu Na Wu; Waltraud X Schulze
Journal:  Methods Mol Biol       Date:  2021
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