Literature DB >> 24335300

Unification of the globally distributed spindle-shaped viruses of the Archaea.

Mart Krupovic1, Emmanuelle R J Quemin, Dennis H Bamford, Patrick Forterre, David Prangishvili.   

Abstract

Viruses with spindle-shaped virions are abundant in diverse environments. Over the years, such viruses have been isolated from a wide range of archaeal hosts. Evolutionary relationships between them remained enigmatic, however. Here, using structural proteins as markers, we define familial ties among these "dark horses" of the virosphere and segregate all spindle-shaped viruses into two distinct evolutionary lineages, corresponding to Bicaudaviridae and Fuselloviridae. Our results illuminate the utility of structure-based virus classification and bring additional order to the virosphere.

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Year:  2013        PMID: 24335300      PMCID: PMC3911535          DOI: 10.1128/JVI.02941-13

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  44 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  PAV1, the first virus-like particle isolated from a hyperthermophilic euryarchaeote, "Pyrococcus abyssi".

Authors:  C Geslin; M Le Romancer; G Erauso; M Gaillard; G Perrot; D Prieur
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

3.  Remarkable morphological diversity of viruses and virus-like particles in hot terrestrial environments.

Authors:  R Rachel; M Bettstetter; B P Hedlund; M Häring; A Kessler; K O Stetter; D Prangishvili
Journal:  Arch Virol       Date:  2002-12       Impact factor: 2.574

4.  Archaebacterial virus SSV1 encodes a putative DnaA-like protein.

Authors:  E V Koonin
Journal:  Nucleic Acids Res       Date:  1992-03-11       Impact factor: 16.971

5.  Observation of virus-like particles in high temperature enrichment cultures from deep-sea hydrothermal vents.

Authors:  Claire Geslin; Marc Le Romancer; Mélusine Gaillard; Gael Erauso; Daniel Prieur
Journal:  Res Microbiol       Date:  2003-05       Impact factor: 3.992

6.  Isolation and characterization of an archaebacterial viruslike particle from Methanococcus voltae A3.

Authors:  A G Wood; W B Whitman; J Konisky
Journal:  J Bacteriol       Date:  1989-01       Impact factor: 3.490

7.  Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2.

Authors:  Kenneth M Stedman; Qunxin She; Hien Phan; Hans Peter Arnold; Ingelore Holz; Roger A Garrett; Wolfram Zillig
Journal:  Res Microbiol       Date:  2003-05       Impact factor: 3.992

8.  Comparative genomic analysis of hyperthermophilic archaeal Fuselloviridae viruses.

Authors:  Blake Wiedenheft; Kenneth Stedman; Francisco Roberto; Deborah Willits; Anne-Kathrin Gleske; Luisa Zoeller; Jamie Snyder; Trevor Douglas; Mark Young
Journal:  J Virol       Date:  2004-02       Impact factor: 5.103

9.  The particle SSV1 from the extremely thermophilic archaeon Sulfolobus is a virus: demonstration of infectivity and of transfection with viral DNA.

Authors:  C Schleper; K Kubo; W Zillig
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

Review 10.  A virocentric perspective on the evolution of life.

Authors:  Eugene V Koonin; Valerian V Dolja
Journal:  Curr Opin Virol       Date:  2013-07-12       Impact factor: 7.090

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  35 in total

1.  Unravelling the Role of the F55 Regulator in the Transition from Lysogeny to UV Induction of Sulfolobus Spindle-Shaped Virus 1.

Authors:  Salvatore Fusco; Qunxin She; Gabriella Fiorentino; Simonetta Bartolucci; Patrizia Contursi
Journal:  J Virol       Date:  2015-04-15       Impact factor: 5.103

2.  New virus isolates from Italian hydrothermal environments underscore the biogeographic pattern in archaeal virus communities.

Authors:  Diana P Baquero; Patrizia Contursi; Monica Piochi; Simonetta Bartolucci; Ying Liu; Virginija Cvirkaite-Krupovic; David Prangishvili; Mart Krupovic
Journal:  ISME J       Date:  2020-04-22       Impact factor: 10.302

Review 3.  Large Tailed Spindle Viruses of Archaea: a New Way of Doing Viral Business.

Authors:  Rebecca Hochstein; Daniel Bollschweiler; Harald Engelhardt; C Martin Lawrence; Mark Young
Journal:  J Virol       Date:  2015-06-17       Impact factor: 5.103

Review 4.  Archaeal extrachromosomal genetic elements.

Authors:  Haina Wang; Nan Peng; Shiraz A Shah; Li Huang; Qunxin She
Journal:  Microbiol Mol Biol Rev       Date:  2015-03       Impact factor: 11.056

5.  Spindle-shaped viruses infect marine ammonia-oxidizing thaumarchaea.

Authors:  Jong-Geol Kim; So-Jeong Kim; Virginija Cvirkaite-Krupovic; Woon-Jong Yu; Joo-Han Gwak; Mario López-Pérez; Francisco Rodriguez-Valera; Mart Krupovic; Jang-Cheon Cho; Sung-Keun Rhee
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-16       Impact factor: 11.205

Review 6.  The LUCA and its complex virome.

Authors:  Mart Krupovic; Valerian V Dolja; Eugene V Koonin
Journal:  Nat Rev Microbiol       Date:  2020-07-14       Impact factor: 60.633

7.  Increase of positive supercoiling in a hyperthermophilic archaeon after UV irradiation.

Authors:  A Gorlas; R Catchpole; E Marguet; P Forterre
Journal:  Extremophiles       Date:  2018-11-22       Impact factor: 2.395

Review 8.  Viruses of archaea: Structural, functional, environmental and evolutionary genomics.

Authors:  Mart Krupovic; Virginija Cvirkaite-Krupovic; Jaime Iranzo; David Prangishvili; Eugene V Koonin
Journal:  Virus Res       Date:  2017-11-22       Impact factor: 3.303

Review 9.  The enigmatic archaeal virosphere.

Authors:  David Prangishvili; Dennis H Bamford; Patrick Forterre; Jaime Iranzo; Eugene V Koonin; Mart Krupovic
Journal:  Nat Rev Microbiol       Date:  2017-11-10       Impact factor: 60.633

10.  Sulfolobus Spindle-Shaped Virus 1 Contains Glycosylated Capsid Proteins, a Cellular Chromatin Protein, and Host-Derived Lipids.

Authors:  Emmanuelle R J Quemin; Maija K Pietilä; Hanna M Oksanen; Patrick Forterre; W Irene C Rijpstra; Stefan Schouten; Dennis H Bamford; David Prangishvili; Mart Krupovic
Journal:  J Virol       Date:  2015-09-09       Impact factor: 5.103

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