Literature DB >> 24333800

Solid-state NMR spectroscopy to study protein-lipid interactions.

Daniel Huster1.   

Abstract

The appropriate lipid environment is crucial for the proper function of membrane proteins. There is a tremendous variety of lipid molecules in the membrane and so far it is often unclear which component of the lipid matrix is essential for the function of a respective protein. Lipid molecules and proteins mutually influence each other; parameters such as acyl chain order, membrane thickness, membrane elasticity, permeability, lipid-domain and annulus formation are strongly modulated by proteins. More recent data also indicates that the influence of proteins goes beyond a single annulus of next-neighbor boundary lipids. Therefore, a mesoscopic approach to membrane lipid-protein interactions in terms of elastic membrane deformations has been developed. Solid-state NMR has greatly contributed to the understanding of lipid-protein interactions and the modern view of biological membranes. Methods that detect the influence of proteins on the membrane as well as direct lipid-protein interactions have been developed and are reviewed here. Examples for solid-state NMR studies on the interaction of Ras proteins, the antimicrobial peptide protegrin-1, the G protein-coupled receptor rhodopsin, and the K(+) channel KcsA are discussed. This article is part of a Special Issue entitled Tools to study lipid functions.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Chemical shift; Dipolar coupling; Magic-angle spinning; Magnetization transfer; Order parameter

Mesh:

Substances:

Year:  2013        PMID: 24333800     DOI: 10.1016/j.bbalip.2013.12.002

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  18 in total

1.  The dynamics of the G protein-coupled neuropeptide Y2 receptor in monounsaturated membranes investigated by solid-state NMR spectroscopy.

Authors:  Lars Thomas; Julian Kahr; Peter Schmidt; Ulrike Krug; Holger A Scheidt; Daniel Huster
Journal:  J Biomol NMR       Date:  2015-01-06       Impact factor: 2.835

2.  Beyond Structural Biology to Functional Biology: Solid-State NMR Experiments and Strategies for Understanding the M2 Proton Channel Conductance.

Authors:  Huajun Qin; Yimin Miao; Timothy A Cross; Riqiang Fu
Journal:  J Phys Chem B       Date:  2017-05-02       Impact factor: 2.991

Review 3.  Challenges and approaches to understand cholesterol-binding impact on membrane protein function: an NMR view.

Authors:  Garima Jaipuria; Tina Ukmar-Godec; Markus Zweckstetter
Journal:  Cell Mol Life Sci       Date:  2018-03-08       Impact factor: 9.261

Review 4.  Cholesterol-induced suppression of membrane elastic fluctuations at the atomistic level.

Authors:  Trivikram R Molugu; Michael F Brown
Journal:  Chem Phys Lipids       Date:  2016-05-03       Impact factor: 3.329

5.  Emerging Diversity in Lipid-Protein Interactions.

Authors:  Valentina Corradi; Besian I Sejdiu; Haydee Mesa-Galloso; Haleh Abdizadeh; Sergei Yu Noskov; Siewert J Marrink; D Peter Tieleman
Journal:  Chem Rev       Date:  2019-02-13       Impact factor: 60.622

6.  Production and Preparation of Isotopically Labeled Human Membrane Proteins in Pichia pastoris for Fast-MAS-NMR Analyses.

Authors:  Lina Barret; Tobias Schubeis; Valérie Kugler; Lucile Guyot; Guido Pintacuda; Renaud Wagner
Journal:  Methods Mol Biol       Date:  2022

7.  Probing Hydronium Ion Histidine NH Exchange Rate Constants in the M2 Channel via Indirect Observation of Dipolar-Dephased 15N Signals in Magic-Angle-Spinning NMR.

Authors:  Riqiang Fu; Yimin Miao; Huajun Qin; Timothy A Cross
Journal:  J Am Chem Soc       Date:  2016-12-01       Impact factor: 15.419

8.  Applications of Lipid Nanodiscs for the Study of Membrane Proteins by Surface Plasmon Resonance.

Authors:  Meg Trahey; Mavis Jiarong Li; Hyewon Kwon; Erica L Woodahl; Wynton D McClary; William M Atkins
Journal:  Curr Protoc Protein Sci       Date:  2015-08-03

9.  Active S2168 and inactive S21IRS pinholin interact differently with the lipid bilayer: A 31P and 2H solid state NMR study.

Authors:  Daniel L Drew; Brandon Butcher; Indra D Sahu; Tanbir Ahammad; Gunjan Dixit; Gary A Lorigan
Journal:  Biochim Biophys Acta Biomembr       Date:  2020-03-05       Impact factor: 3.747

10.  Proton-Detected Solid-State NMR of the Cell-Free Synthesized α-Helical Transmembrane Protein NS4B from Hepatitis C Virus.

Authors:  Vlastimil Jirasko; Nils-Alexander Lakomek; Susanne Penzel; Marie-Laure Fogeron; Ralf Bartenschlager; Beat H Meier; Anja Böckmann
Journal:  Chembiochem       Date:  2020-02-20       Impact factor: 3.164

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