Literature DB >> 24328247

Atomic structure and handedness of the building block of a biological assembly.

Antoine Loquet1, Birgit Habenstein, Veniamin Chevelkov, Suresh Kumar Vasa, Karin Giller, Stefan Becker, Adam Lange.   

Abstract

Noncovalent supramolecular assemblies possess in general several unique subunit-subunit interfaces.The basic building block of such an assembly consists of several subunits and contains all unique interfaces. Atomic-resolution structures of monomeric subunits are typically accessed by crystallography or solution NMR and fitted into electron microscopy density maps. However, the structure of the intact building block in the assembled state remains unknown with this hybrid approach. Here, we present the solid-state NMR atomic structure of the building block of the type III secretion system needle. The building block structure consists of a homotetrameric subunit complex with three unique supramolecular interfaces. Side-chain positions at the interfaces were solved at atomic detail. The high-resolution structure reveals unambiguously the helical handedness of the assembly, determined to be right-handed for the type III secretion system needle.Additionally, the axial rise per subunit could be extracted from the tetramer structure and independently validated by mass-per-length measurements.

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Year:  2013        PMID: 24328247     DOI: 10.1021/ja411362q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  6 in total

Review 1.  Structural biology of supramolecular assemblies by magic-angle spinning NMR spectroscopy.

Authors:  Caitlin M Quinn; Tatyana Polenova
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

2.  High-resolution structure of the Shigella type-III secretion needle by solid-state NMR and cryo-electron microscopy.

Authors:  Jean-Philippe Demers; Birgit Habenstein; Antoine Loquet; Suresh Kumar Vasa; Karin Giller; Stefan Becker; David Baker; Adam Lange; Nikolaos G Sgourakis
Journal:  Nat Commun       Date:  2014-09-29       Impact factor: 14.919

3.  Structure determination of helical filaments by solid-state NMR spectroscopy.

Authors:  Lichun He; Benjamin Bardiaux; Mumdooh Ahmed; Johannes Spehr; Renate König; Heinrich Lünsdorf; Ulfert Rand; Thorsten Lührs; Christiane Ritter
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-05       Impact factor: 11.205

Review 4.  Selective labeling and unlabeling strategies in protein solid-state NMR spectroscopy.

Authors:  Denis Lacabanne; Beat H Meier; Anja Böckmann
Journal:  J Biomol NMR       Date:  2017-12-02       Impact factor: 2.835

5.  Reassessment of MxiH subunit orientation and fold within native Shigella T3SS needles using surface labelling and solid-state NMR.

Authors:  Joeri Verasdonck; Da-Kang Shen; Alexander Treadgold; Christopher Arthur; Anja Böckmann; Beat H Meier; Ariel J Blocker
Journal:  J Struct Biol       Date:  2015-10-06       Impact factor: 2.867

6.  Atomic Scale Structural Studies of Macromolecular Assemblies by Solid-state Nuclear Magnetic Resonance Spectroscopy.

Authors:  Antoine Loquet; James Tolchard; Melanie Berbon; Denis Martinez; Birgit Habenstein
Journal:  J Vis Exp       Date:  2017-09-17       Impact factor: 1.355

  6 in total

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