Literature DB >> 24326463

Practicing pathology in the era of big data and personalized medicine.

Jiang Gu1, Clive R Taylor.   

Abstract

The traditional task of the pathologist is to assist physicians in making the correct diagnosis of diseases at the earliest possible stage to effectuate the optimal treatment strategy for each individual patient. In this respect surgical pathology (the traditional tissue diagnosis) is but a tool. It is not, of itself, the purpose of pathology practice; and change is in the air. This January 2014 issue of Applied Immunohistochemistry and Molecular Morphology (AIMM) embraces that change by the incorporation of the agenda and content of the journal Diagnostic Molecular Morphology (DMP). Over a decade ago AIMM introduced and promoted the concept of "molecular morphology," and has sought to publish molecular studies that correlate with the morphologic features that continue to define cancer and many diseases. That intent is now reinforced and extended by the merger with DMP, as a logical and timely response to the growing impact of a wide range of genetic and molecular technologies that are beginning to reshape the way in which pathology is practiced. The use of molecular and genomic techniques already demonstrates clear value in the diagnosis of disease, with treatment tailored specifically to individual patients. Personalized medicine is the future, and personalized medicine demands personalized pathology. The need for integration of the flood of new molecular data, with surgical pathology, digital pathology, and the full range of pathology data in the electronic medical record has never been greater. This review describes the possible impact of these pressures upon the discipline of pathology, and examines possible outcomes. There is a sense of excitement and adventure. Active adaption and innovation are required. The new AIMM, incorporating DMP, seeks to position itself for a central role in this process.

Entities:  

Mesh:

Year:  2014        PMID: 24326463      PMCID: PMC4206549          DOI: 10.1097/PAI.0000000000000022

Source DB:  PubMed          Journal:  Appl Immunohistochem Mol Morphol        ISSN: 1533-4058


  44 in total

Review 1.  Quantification of immunohistochemistry--issues concerning methods, utility and semiquantitative assessment II.

Authors:  C R Taylor; R M Levenson
Journal:  Histopathology       Date:  2006-10       Impact factor: 5.087

2.  Quantifiable internal reference standards for immunohistochemistry: the measurement of quantity by weight.

Authors:  Clive R Taylor
Journal:  Appl Immunohistochem Mol Morphol       Date:  2006-09

Review 3.  Issues in using whole slide imaging for diagnostic pathology: "routine" stains, immunohistochemistry and predictive markers.

Authors:  C R Taylor
Journal:  Biotech Histochem       Date:  2013-12-11       Impact factor: 1.718

Review 4.  Liquid biopsy: monitoring cancer-genetics in the blood.

Authors:  Emily Crowley; Federica Di Nicolantonio; Fotios Loupakis; Alberto Bardelli
Journal:  Nat Rev Clin Oncol       Date:  2013-07-09       Impact factor: 66.675

Review 5.  Complete solubilization of formalin-fixed, paraffin-embedded tissue may improve proteomic studies.

Authors:  Shan-Rong Shi; Clive R Taylor; Carol B Fowler; Jeffrey T Mason
Journal:  Proteomics Clin Appl       Date:  2013-03-06       Impact factor: 3.494

Review 6.  Implementing genomic medicine in pathology.

Authors:  Eli S Williams; Madhuri Hegde
Journal:  Adv Anat Pathol       Date:  2013-07       Impact factor: 3.875

7.  Patterns of somatic mutation in human cancer genomes.

Authors:  Christopher Greenman; Philip Stephens; Raffaella Smith; Gillian L Dalgliesh; Christopher Hunter; Graham Bignell; Helen Davies; Jon Teague; Adam Butler; Claire Stevens; Sarah Edkins; Sarah O'Meara; Imre Vastrik; Esther E Schmidt; Tim Avis; Syd Barthorpe; Gurpreet Bhamra; Gemma Buck; Bhudipa Choudhury; Jody Clements; Jennifer Cole; Ed Dicks; Simon Forbes; Kris Gray; Kelly Halliday; Rachel Harrison; Katy Hills; Jon Hinton; Andy Jenkinson; David Jones; Andy Menzies; Tatiana Mironenko; Janet Perry; Keiran Raine; Dave Richardson; Rebecca Shepherd; Alexandra Small; Calli Tofts; Jennifer Varian; Tony Webb; Sofie West; Sara Widaa; Andy Yates; Daniel P Cahill; David N Louis; Peter Goldstraw; Andrew G Nicholson; Francis Brasseur; Leendert Looijenga; Barbara L Weber; Yoke-Eng Chiew; Anna DeFazio; Mel F Greaves; Anthony R Green; Peter Campbell; Ewan Birney; Douglas F Easton; Georgia Chenevix-Trench; Min-Han Tan; Sok Kean Khoo; Bin Tean Teh; Siu Tsan Yuen; Suet Yi Leung; Richard Wooster; P Andrew Futreal; Michael R Stratton
Journal:  Nature       Date:  2007-03-08       Impact factor: 49.962

8.  Distinct profile of driver mutations and clinical features in immunomarker-defined subsets of pulmonary large-cell carcinoma.

Authors:  Natasha Rekhtman; Laura J Tafe; Jamie E Chaft; Lu Wang; Maria E Arcila; Agnes Colanta; Andre L Moreira; Maureen F Zakowski; William D Travis; Camelia S Sima; Mark G Kris; Marc Ladanyi
Journal:  Mod Pathol       Date:  2012-11-30       Impact factor: 7.842

Review 9.  Targeted therapy for HER2 positive breast cancer.

Authors:  Jason A Incorvati; Shilpan Shah; Ying Mu; Janice Lu
Journal:  J Hematol Oncol       Date:  2013-06-03       Impact factor: 17.388

10.  Mutational landscape and significance across 12 major cancer types.

Authors:  Cyriac Kandoth; Michael D McLellan; Fabio Vandin; Kai Ye; Beifang Niu; Charles Lu; Mingchao Xie; Qunyuan Zhang; Joshua F McMichael; Matthew A Wyczalkowski; Mark D M Leiserson; Christopher A Miller; John S Welch; Matthew J Walter; Michael C Wendl; Timothy J Ley; Richard K Wilson; Benjamin J Raphael; Li Ding
Journal:  Nature       Date:  2013-10-17       Impact factor: 49.962

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  2 in total

1.  PD-L1 Assessment for Targeted Therapy Testing in Cancer: Urgent Need For Realistic Economic and Practice Expectations.

Authors:  Hadi Yaziji; Clive R Taylor
Journal:  Appl Immunohistochem Mol Morphol       Date:  2017-01

2.  Predictive biomarkers and companion diagnostics. The future of immunohistochemistry: "in situ proteomics," or just a "stain"?

Authors:  Clive R Taylor
Journal:  Appl Immunohistochem Mol Morphol       Date:  2014-09
  2 in total

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