Literature DB >> 24313439

Evaluation criteria for the quality of published experimental data on nanomaterials and their usefulness for QSAR modelling.

L Lubinski1, P Urbaszek, A Gajewicz, M T D Cronin, S J Enoch, J C Madden, D Leszczynska, J Leszczynski, T Puzyn.   

Abstract

Nowadays nanotechnology is one of the most promising areas of science. The number and quantity of synthesized nanomaterials increase exponentially, therefore it is reasonable to expect that comprehensive risk assessment based only on empirical testing of all novel engineered nanoparticles (NPs) will very soon become impossible. Hence, the development of computational methods complementary to experimentation is very important. Quantitative structure-property relationship (QSPR) and quantitative structure-activity relationship (QSAR) models widely used in pharmaceutical chemistry and environmental science can also be modified and adopted for nanotechnology to predict physico-chemical properties and toxicity of empirically untested nanomaterials. All QSPR/QSAR modelling activities are based on experimentally derived data. It is important that, within a given data set, all values should be consistent, of high quality and measured according to a standardized protocol. Unfortunately, the amount of such data available for engineered nanoparticles in various data sources (i.e. databases and the literature) is very limited and seldom measured with a standardized protocol. Therefore, we have proposed a framework for collecting and evaluating the existing data, with the focus on possible applications for computational evaluation of properties and biological activities of nanomaterials.

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Year:  2013        PMID: 24313439     DOI: 10.1080/1062936X.2013.840679

Source DB:  PubMed          Journal:  SAR QSAR Environ Res        ISSN: 1026-776X            Impact factor:   3.000


  7 in total

1.  How should the completeness and quality of curated nanomaterial data be evaluated?

Authors:  Richard L Marchese Robinson; Iseult Lynch; Willie Peijnenburg; John Rumble; Fred Klaessig; Clarissa Marquardt; Hubert Rauscher; Tomasz Puzyn; Ronit Purian; Christoffer Åberg; Sandra Karcher; Hanne Vriens; Peter Hoet; Mark D Hoover; Christine Ogilvie Hendren; Stacey L Harper
Journal:  Nanoscale       Date:  2016-05-04       Impact factor: 7.790

Review 2.  In silico models for predicting vector control chemicals targeting Aedes aegypti.

Authors:  J Devillers; C Lagneau; A Lattes; J C Garrigues; M M Clémenté; A Yébakima
Journal:  SAR QSAR Environ Res       Date:  2014-10-02       Impact factor: 3.000

3.  Towards a generalized toxicity prediction model for oxide nanomaterials using integrated data from different sources.

Authors:  Jang-Sik Choi; My Kieu Ha; Tung Xuan Trinh; Tae Hyun Yoon; Hyung-Gi Byun
Journal:  Sci Rep       Date:  2018-04-17       Impact factor: 4.379

4.  Towards the Development of Global Nano-Quantitative Structure-Property Relationship Models: Zeta Potentials of Metal Oxide Nanoparticles.

Authors:  Andrey A Toropov; Natalia Sizochenko; Alla P Toropova; Jerzy Leszczynski
Journal:  Nanomaterials (Basel)       Date:  2018-04-15       Impact factor: 5.076

5.  An ISA-TAB-Nano based data collection framework to support data-driven modelling of nanotoxicology.

Authors:  Richard L Marchese Robinson; Mark T D Cronin; Andrea-Nicole Richarz; Robert Rallo
Journal:  Beilstein J Nanotechnol       Date:  2015-10-05       Impact factor: 3.649

6.  Toxicity Classification of Oxide Nanomaterials: Effects of Data Gap Filling and PChem Score-based Screening Approaches.

Authors:  My Kieu Ha; Tung Xuan Trinh; Jang Sik Choi; Desy Maulina; Hyung Gi Byun; Tae Hyun Yoon
Journal:  Sci Rep       Date:  2018-02-16       Impact factor: 4.379

Review 7.  NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment.

Authors:  Antreas Afantitis; Georgia Melagraki; Panagiotis Isigonis; Andreas Tsoumanis; Dimitra Danai Varsou; Eugenia Valsami-Jones; Anastasios Papadiamantis; Laura-Jayne A Ellis; Haralambos Sarimveis; Philip Doganis; Pantelis Karatzas; Periklis Tsiros; Irene Liampa; Vladimir Lobaskin; Dario Greco; Angela Serra; Pia Anneli Sofia Kinaret; Laura Aliisa Saarimäki; Roland Grafström; Pekka Kohonen; Penny Nymark; Egon Willighagen; Tomasz Puzyn; Anna Rybinska-Fryca; Alexander Lyubartsev; Keld Alstrup Jensen; Jan Gerit Brandenburg; Stephen Lofts; Claus Svendsen; Samuel Harrison; Dieter Maier; Kaido Tamm; Jaak Jänes; Lauri Sikk; Maria Dusinska; Eleonora Longhin; Elise Rundén-Pran; Espen Mariussen; Naouale El Yamani; Wolfgang Unger; Jörg Radnik; Alexander Tropsha; Yoram Cohen; Jerzy Leszczynski; Christine Ogilvie Hendren; Mark Wiesner; David Winkler; Noriyuki Suzuki; Tae Hyun Yoon; Jang-Sik Choi; Natasha Sanabria; Mary Gulumian; Iseult Lynch
Journal:  Comput Struct Biotechnol J       Date:  2020-03-07       Impact factor: 7.271

  7 in total

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