Literature DB >> 24301059

VHL mosaicism can be detected by clinical next-generation sequencing and is not restricted to patients with a mild phenotype.

Lucie Coppin1, Claudine Grutzmacher2, Michel Crépin2, Evelyne Destailleur2, Sophie Giraud3, Catherine Cardot-Bauters4, Nicole Porchet1, Pascal Pigny1.   

Abstract

The identification of Von Hippel-Lindau (VHL) mosaic mutations by conventional Sanger sequencing requires a labour-intensive enrichment step, thus explaining that mosaicism occurrence is underestimated in patients. Nowadays, it is possible to detect mutation in cell sub-populations by next-generation sequencing (NGS). Here, we described a diagnosis strategy using NGS with high coverage in a series of eight patients who were negative for a VHL abnormality by Sanger sequencing and deletion search. In two patients, a mosaic mutation in VHL was detected by NGS. One patient with a 5.7% mutated allele frequency had a severe phenotype and an early disease onset. In conclusion, clinical NGS in an hospital molecular oncogenetics laboratory is an efficient tool to identify VHL mosaic mutation. Its use may improve patient monitoring and genetic counseling.

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Year:  2013        PMID: 24301059      PMCID: PMC4135403          DOI: 10.1038/ejhg.2013.279

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  9 in total

1.  Exome sequencing can detect pathogenic mosaic mutations present at low allele frequencies.

Authors:  Alistair T Pagnamenta; Stefano Lise; Victoria Harrison; Helen Stewart; Sandeep Jayawant; Gerardine Quaghebeur; Alexander T Deng; Valerie Elizabeth Murphy; Elham Sadighi Akha; Andy Rimmer; Iain Mathieson; Samantha J L Knight; Usha Kini; Jenny C Taylor; David A Keays
Journal:  J Hum Genet       Date:  2011-12-01       Impact factor: 3.172

2.  Mosaicism in von Hippel-Lindau disease: lessons from kindreds with germline mutations identified in offspring with mosaic parents.

Authors:  M T Sgambati; C Stolle; P L Choyke; M M Walther; B Zbar; W M Linehan; G M Glenn
Journal:  Am J Hum Genet       Date:  2000-01       Impact factor: 11.025

Review 3.  Next-generation DNA sequencing methods.

Authors:  Elaine R Mardis
Journal:  Annu Rev Genomics Hum Genet       Date:  2008       Impact factor: 8.929

4.  Real-time DNA sequencing using detection of pyrophosphate release.

Authors:  M Ronaghi; S Karamohamed; B Pettersson; M Uhlén; P Nyrén
Journal:  Anal Biochem       Date:  1996-11-01       Impact factor: 3.365

Review 5.  von Hippel-Lindau disease: a clinical and scientific review.

Authors:  Eamonn R Maher; Hartmut Ph Neumann; Stéphane Richard
Journal:  Eur J Hum Genet       Date:  2011-03-09       Impact factor: 4.246

6.  Mosaicism in von Hippel-Lindau disease with severe renal manifestations.

Authors:  P Wu; N Zhang; X Wang; T Li; X Ning; D Bu; K Gong
Journal:  Clin Genet       Date:  2013-02-05       Impact factor: 4.438

7.  Germline mutations in the von Hippel-Lindau gene in Italian patients.

Authors:  Paola Ciotti; Anna Garuti; Rossella Gulli; Alberto Ballestrero; Emilia Bellone; Paola Mandich
Journal:  Eur J Med Genet       Date:  2009-05-21       Impact factor: 2.708

8.  Detection of base substitution-type somatic mosaicism of the NLRP3 gene with >99.9% statistical confidence by massively parallel sequencing.

Authors:  Kazushi Izawa; Atsushi Hijikata; Naoko Tanaka; Tomoki Kawai; Megumu K Saito; Raphaela Goldbach-Mansky; Ivona Aksentijevich; Takahiro Yasumi; Tatsutoshi Nakahata; Toshio Heike; Ryuta Nishikomori; Osamu Ohara
Journal:  DNA Res       Date:  2012-01-24       Impact factor: 4.458

9.  Mosaicism in von Hippel-Lindau disease: an event important to recognize.

Authors:  Libero Santarpia; Nicholas J Sarlis; Mariacarmela Santarpia; Steven I Sherman; Francesco Trimarchi; Salvatore Benvenga
Journal:  J Cell Mol Med       Date:  2007 Nov-Dec       Impact factor: 5.310

  9 in total
  7 in total

1.  PheoSeq: A Targeted Next-Generation Sequencing Assay for Pheochromocytoma and Paraganglioma Diagnostics.

Authors:  Maria Currás-Freixes; Elena Piñeiro-Yañez; Cristina Montero-Conde; María Apellániz-Ruiz; Bruna Calsina; Veronika Mancikova; Laura Remacha; Susan Richter; Tonino Ercolino; Natalie Rogowski-Lehmann; Timo Deutschbein; María Calatayud; Sonsoles Guadalix; Cristina Álvarez-Escolá; Cristina Lamas; Javier Aller; Julia Sastre-Marcos; Conxi Lázaro; Juan C Galofré; Ana Patiño-García; Amparo Meoro-Avilés; Judith Balmaña-Gelpi; Paz De Miguel-Novoa; Milagros Balbín; Xavier Matías-Guiu; Rocío Letón; Lucía Inglada-Pérez; Rafael Torres-Pérez; Juan M Roldán-Romero; Cristina Rodríguez-Antona; Stephanie M J Fliedner; Giuseppe Opocher; Karel Pacak; Esther Korpershoek; Ronald R de Krijger; Laurent Vroonen; Massimo Mannelli; Martin Fassnacht; Felix Beuschlein; Graeme Eisenhofer; Alberto Cascón; Fátima Al-Shahrour; Mercedes Robledo
Journal:  J Mol Diagn       Date:  2017-05-25       Impact factor: 5.568

2.  Systematic detection of mosaicism by using digital NGS reveals three new MEN1 mosaicisms.

Authors:  Arnaud Lagarde; Grégory Mougel; Lucie Coppin; Magalie Haissaguerre; Lauriane Le Collen; Amira Mohamed; Marc Klein; Marie-Françoise Odou; Antoine Tabarin; Hedia Brixi; Thomas Cuny; Brigitte Delemer; Anne Barlier; Pauline Romanet
Journal:  Endocr Connect       Date:  2022-10-14       Impact factor: 3.221

3.  High-resolution melting (HRM) re-analysis of a polyposis patients cohort reveals previously undetected heterozygous and mosaic APC gene mutations.

Authors:  Astrid A Out; Ivonne J H M van Minderhout; Nienke van der Stoep; Lysette S R van Bommel; Irma Kluijt; Cora Aalfs; Marsha Voorendt; Rolf H A M Vossen; Maartje Nielsen; Hans F A Vasen; Hans Morreau; Peter Devilee; Carli M J Tops; Frederik J Hes
Journal:  Fam Cancer       Date:  2015-06       Impact factor: 2.375

4.  VHL mosaicism: the added value of multi-tissue analysis.

Authors:  Leslie E Oldfield; Jessica Grzybowski; Sylvie Grenier; Elizabeth Chao; Gregory S Downs; Kirsten M Farncombe; Tracy L Stockley; Ozgur Mete; Raymond H Kim
Journal:  NPJ Genom Med       Date:  2022-03-18       Impact factor: 8.617

Review 5.  Investigating the role of somatic sequencing platforms for phaeochromocytoma and paraganglioma in a large UK cohort.

Authors:  Bettina Winzeler; Nicola Tufton; Eugenie S Lim; Ben G Challis; Soo-Mi Park; Louise Izatt; Paul V Carroll; Anand Velusamy; Tony Hulse; Benjamin C Whitelaw; Ezequiel Martin; Fay Rodger; Melanie Maranian; Graeme R Clark; Scott A Akker; Eamonn R Maher; Ruth T Casey
Journal:  Clin Endocrinol (Oxf)       Date:  2021-12-06       Impact factor: 3.523

6.  Investigation and Management of Apparently Sporadic Central Nervous System Haemangioblastoma for Evidence of Von Hippel-Lindau Disease.

Authors:  Hugh Furness; Louay Salfity; Johanna Devereux; Dorothy Halliday; Helen Hanson; Deborah M Ruddy; Neha Shah; George Sultana; Emma R Woodward; Richard N Sandford; Katie M Snape; Eamonn R Maher
Journal:  Genes (Basel)       Date:  2021-09-15       Impact factor: 4.096

7.  Elongin C (ELOC/TCEB1)-associated von Hippel-Lindau disease.

Authors:  Avgi Andreou; Bryndis Yngvadottir; Laia Bassaganyas; Graeme Clark; Ezequiel Martin; James Whitworth; Alex J Cornish; Richard S Houlston; Philip Rich; Catherine Egan; Shirley V Hodgson; Anne Y Warren; Katie Snape; Eamonn R Maher
Journal:  Hum Mol Genet       Date:  2022-08-23       Impact factor: 5.121

  7 in total

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