Literature DB >> 36112497

Systematic detection of mosaicism by using digital NGS reveals three new MEN1 mosaicisms.

Arnaud Lagarde1, Grégory Mougel1, Lucie Coppin2, Magalie Haissaguerre3, Lauriane Le Collen4,5, Amira Mohamed6, Marc Klein7, Marie-Françoise Odou8,9, Antoine Tabarin3, Hedia Brixi10, Thomas Cuny11, Brigitte Delemer4, Anne Barlier1, Pauline Romanet1.   

Abstract

Purpose: Mosaicism is a feature of several inherited tumor syndromes. Only a few cases of mosaicism have been described in multiple endocrine neoplasia type 1 (MEN1). Next-generation sequencing (NGS) offers new possibilities for detecting mosaicism. Here, we report the first study to systematically look for MEN1 mosaicism, using blood DNA, in MEN1-suspected patients but without MEN1 pathogenic variants (PV) in a heterozygous state.
Methods: Digital targeted NGS, including unique molecular identifiers (UMIs), was performed in routine practice, and the analytic performance of this method was verified.
Results: Among a cohort of 119 patients harboring from 2 to 5 MEN1 lesions, we identified 3 patients with MEN1 mosaic PVs. The allele frequencies ranged from 2.3 to 9.5%. The detection rate of MEN1 mosaicism in patients bearing at least 3 MEN1 lesions was 17% (3/18). No cases were detected in patients with two lesions.
Conclusion: We report here three new cases with MEN1 mosaicism. This study examined the performance of UMI in the diagnosis of MEN1 mosaicism in routine practice, and our results underline that the frequency of mosaicism is probably underestimated in patients with suspected MEN1.

Entities:  

Keywords:  MEN1; NGS; de novo; deep-sequencing; digital NGS; hyperparathyroidism; mosaic; mosaicism; pancreatic neuroendocrine tumor; pituitary adenoma; thymic tumor; unique molecular identifier

Year:  2022        PMID: 36112497      PMCID: PMC9578105          DOI: 10.1530/EC-22-0093

Source DB:  PubMed          Journal:  Endocr Connect        ISSN: 2049-3614            Impact factor:   3.221


  27 in total

1.  Counting absolute numbers of molecules using unique molecular identifiers.

Authors:  Teemu Kivioja; Anna Vähärautio; Kasper Karlsson; Martin Bonke; Martin Enge; Sten Linnarsson; Jussi Taipale
Journal:  Nat Methods       Date:  2011-11-20       Impact factor: 28.547

Review 2.  Clinical practice guidelines for multiple endocrine neoplasia type 1 (MEN1).

Authors:  Rajesh V Thakker; Paul J Newey; Gerard V Walls; John Bilezikian; Henning Dralle; Peter R Ebeling; Shlomo Melmed; Akihiro Sakurai; Francesco Tonelli; Maria Luisa Brandi
Journal:  J Clin Endocrinol Metab       Date:  2012-06-20       Impact factor: 5.958

3.  Clinical testing for multiple endocrine neoplasia type 1 in a DNA diagnostic laboratory.

Authors:  Roger D Klein; Sana Salih; Jesse Bessoni; Allen E Bale
Journal:  Genet Med       Date:  2005-02       Impact factor: 8.822

4.  Targeted next-generation sequencing for differential diagnosis of neurofibromatosis type 2, schwannomatosis, and meningiomatosis.

Authors:  Camille Louvrier; Eric Pasmant; Audrey Briand-Suleau; Joëlle Cohen; Patrick Nitschké; Juliette Nectoux; Lucie Orhant; Cécile Zordan; Cyril Goizet; Stéphane Goutagny; Dominique Lallemand; Michel Vidaud; Dominique Vidaud; Michel Kalamarides; Béatrice Parfait
Journal:  Neuro Oncol       Date:  2018-06-18       Impact factor: 12.300

5.  Optimization of Next-Generation Sequencing Technologies for von Hippel Lindau (VHL) Mosaic Mutation Detection and Development of Confirmation Methods.

Authors:  Lucie Coppin; Pascal Plouvier; Michel Crépin; Anne-Sophie Jourdain; Emilie Ait Yahya; Stéphane Richard; Brigitte Bressac-de Paillerets; Catherine Cardot-Bauters; Sophie Lejeune; Julie Leclerc; Pascal Pigny
Journal:  J Mol Diagn       Date:  2019-02-05       Impact factor: 5.568

6.  Germline and somatic mosaicism in a family with multiple endocrine neoplasia type 1 (MEN1) syndrome.

Authors:  Hanneke J B H Beijers; Nike M L Stikkelbroeck; Arjen R Mensenkamp; Rolph Pfundt; Rob B van der Luijt; Henri J L M Timmers; Ad R M M Hermus; Marlies J E Kempers
Journal:  Eur J Endocrinol       Date:  2019-02-01       Impact factor: 6.664

7.  Detection of base substitution-type somatic mosaicism of the NLRP3 gene with >99.9% statistical confidence by massively parallel sequencing.

Authors:  Kazushi Izawa; Atsushi Hijikata; Naoko Tanaka; Tomoki Kawai; Megumu K Saito; Raphaela Goldbach-Mansky; Ivona Aksentijevich; Takahiro Yasumi; Tatsutoshi Nakahata; Toshio Heike; Ryuta Nishikomori; Osamu Ohara
Journal:  DNA Res       Date:  2012-01-24       Impact factor: 4.458

8.  MEN1 redefined, a clinical comparison of mutation-positive and mutation-negative patients.

Authors:  Joanne M de Laat; Rob B van der Luijt; Carolina R C Pieterman; Maria P Oostveen; Ad R Hermus; Olaf M Dekkers; Wouter W de Herder; Anouk N van der Horst-Schrivers; Madeleine L Drent; Peter H Bisschop; Bas Havekes; Menno R Vriens; Gerlof D Valk
Journal:  BMC Med       Date:  2016-11-15       Impact factor: 8.775

Review 9.  Multiple endocrine neoplasia type 1 (MEN1): analysis of 1336 mutations reported in the first decade following identification of the gene.

Authors:  Manuel C Lemos; Rajesh V Thakker
Journal:  Hum Mutat       Date:  2008-01       Impact factor: 4.878

10.  Quantitative and sensitive detection of GNAS mutations causing mccune-albright syndrome with next generation sequencing.

Authors:  Satoshi Narumi; Kumihiro Matsuo; Tomohiro Ishii; Yusuke Tanahashi; Tomonobu Hasegawa
Journal:  PLoS One       Date:  2013-03-25       Impact factor: 3.240

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