| Literature DB >> 24299421 |
Isabelle Scheid, Anna Maruani, Guillaume Huguet, Claire S Leblond, Gudrun Nygren, Henrik Anckarsäter, Anita Beggiato, Maria Rastam, Fréderique Amsellem, I Carina Gillberg, Monique Elmaleh, Marion Leboyer, Christopher Gillberg, Catalina Betancur, Mary Coleman, Hiroko Hama, Edwin H Cook, Thomas Bourgeron, Richard Delorme1.
Abstract
BACKGROUND: Widespread abnormalities in white matter development are frequently reported in cases of autism spectrum disorders (ASD) and could be involved in the disconnectivity suggested in these disorders. Homozygous mutations in the gene coding for fatty-acid 2-hydroxylase (FA2H), an enzyme involved in myelin synthesis, are associated with complex leukodystrophies, but little is known about the functional impact of heterozygous FA2H mutations. We hypothesized that rare deleterious heterozygous mutations of FA2H might constitute risk factors for ASD.Entities:
Mesh:
Substances:
Year: 2013 PMID: 24299421 PMCID: PMC4219428 DOI: 10.1186/1471-2350-14-124
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Figure 1An heterozygous deletion was identified with the Human 1 M-Duo SNP array from Illumina in the patient AUR139_7. The heterozygous deletion, inherited from the mother and shared by an affected sibling, spans 167.1 kb on chromosome 16q22.3-q23.1, and included FA2H, MLKL and the first two exons of RFWD3. The upper plot shows Log R Ratio (in red) and B allele frequency (in green). QuantiSNP score is represented with a blue line and indicates the deletion size. One heterozygous deletion was previously referenced in the Database of Genomic Variants (chr16:73304298-73370177_hg18 variation_49753) and reported in 3/2026 children from the CHOP cohort. Three patients with developmental delay are reported in DECIPHER (https://decipher.sanger.ac.uk): two carried a deletion (ID: 1694, del chr16:73196749-73363966_hg18; ID: 253240, chr16:71201202-88651780_hg18) and one a duplication (ID: 2564, chr16:72853856-74355880_hg18). Red bars are deletions, and blue bars are duplications.
Figure 2deleterious single nucleotide variants in our study and in literature. (A) Distribution of R113Q in Family 2 and R113W in Family 3. In both families, mutations were shared by both affected siblings and inherited from a healthy parent. In Family 3, the sequence chromatograph of the mother showed a reduced signal for the mutation [the size of the allele T signal (in red) in the mother was twice lower than the signal observed in her affected children]. (B) We compared amino acid sequence conservation across species by aligning FA2H homologs using ClustalW (http://www.ebi.ac.uk/Tools/clustalw2/index.html). The R113 residue showed moderate conservation. (C) Localization of R113Q/R113W mutations and other reported mutations on a schematic representation of FA2H [8-11,15-18]. Red squares represent transmembrane domains, the purple rectangle represents the cytochrome B5-like heme-binding domain, and green rectangles represent the catalytic domain. The D35Y mutation has been reported in patients with leukodystrophy with spastic paraparesis and dystonia [9], the R235 and R53_I58del mutations in patients with hereditary spastic paraplegia [8], and the R154C and Y170X mutations in patients with degeneration associated with brain iron accumulation [11]. Splice site mutations predicted to result in skipping of exons 5-7(short gray line) and 2-7(long grey line) have been reported [9,15].
Figure 3Exploration of the somatic mosaicism in the Mother. (A) Results of NcoI digestion of FA2H PCR products from DNA extracted from lymphocytes and buccal cells. A NcoI site is created by the R113W mutation in exon 2. In both types of tissue tested, we found a lack of digestion in the father, partial digestion in both affected children and a low level of partial digestion in the mother. (B) Percentage of clones carrying the wild type (allele C, blue bar) and mutant alleles (allele T, red bar) as determined by cloning PCR products amplified from blood DNA of the clinically affected patient and his unaffected mother (Family 3).
Figure 4Brain MRI of the patient AUR139_7 at 9 years of age. (A) Axial T2-FLAIR weighted images showed slightly prolonged relaxation times in the periventricular white matter, more prominent in the posterior region (red arrow) with no significant loss of volume. (B) Axial diffusion-weighted images (DWI) showed slightly elevated apparent diffusion coefficient (ADC) values.