Literature DB >> 22146942

Exome sequencing and SNP analysis detect novel compound heterozygosity in fatty acid hydroxylase-associated neurodegeneration.

Tyler Mark Pierson1, Dimitre R Simeonov, Murat Sincan, David A Adams, Thomas Markello, Gretchen Golas, Karin Fuentes-Fajardo, Nancy F Hansen, Praveen F Cherukuri, Pedro Cruz, James C Mullikin, Craig Blackstone, Cynthia Tifft, Cornelius F Boerkoel, William A Gahl.   

Abstract

Fatty acid hydroxylase-associated neurodegeneration due to fatty acid 2-hydroxylase deficiency presents with a wide range of phenotypes including spastic paraplegia, leukodystrophy, and/or brain iron deposition. All previously described families with this disorder were consanguineous, with homozygous mutations in the probands. We describe a 10-year-old male, from a non-consanguineous family, with progressive spastic paraplegia, dystonia, ataxia, and cognitive decline associated with a sural axonal neuropathy. The use of high-throughput sequencing techniques combined with SNP array analyses revealed a novel paternally derived missense mutation and an overlapping novel maternally derived ~28-kb genomic deletion in FA2H. This patient provides further insight into the consistent features of this disorder and expands our understanding of its phenotypic presentation. The presence of a sural nerve axonal neuropathy had not been previously associated with this disorder and so may extend the phenotype.

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Year:  2011        PMID: 22146942      PMCID: PMC3306865          DOI: 10.1038/ejhg.2011.222

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  14 in total

1.  Massively parallel sequencing of exons on the X chromosome identifies RBM10 as the gene that causes a syndromic form of cleft palate.

Authors:  Jennifer J Johnston; Jamie K Teer; Praveen F Cherukuri; Nancy F Hansen; Stacie K Loftus; Karen Chong; James C Mullikin; Leslie G Biesecker
Journal:  Am J Hum Genet       Date:  2010-05-06       Impact factor: 11.025

2.  Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing.

Authors:  Jamie K Teer; Lori L Bonnycastle; Peter S Chines; Nancy F Hansen; Natsuyo Aoyama; Amy J Swift; Hatice Ozel Abaan; Thomas J Albert; Elliott H Margulies; Eric D Green; Francis S Collins; James C Mullikin; Leslie G Biesecker
Journal:  Genome Res       Date:  2010-09-01       Impact factor: 9.043

3.  Chediak-Higashi syndrome with early developmental delay resulting from paternal heterodisomy of chromosome 1.

Authors:  Irini Manoli; Gretchen Golas; Wendy Westbroek; Thierry Vilboux; Thomas C Markello; Wendy Introne; Dawn Maynard; Ben Pederson; Ekaterini Tsilou; Michael B Jordan; P Suzanne Hart; James G White; William A Gahl; Marjan Huizing
Journal:  Am J Med Genet A       Date:  2010-06       Impact factor: 2.802

4.  Central nervous system dysfunction in a mouse model of FA2H deficiency.

Authors:  Kathleen A Potter; Michael J Kern; George Fullbright; Jacek Bielawski; Steven S Scherer; Sabrina W Yum; Jian J Li; Hua Cheng; Xianlin Han; Jagadish Kummetha Venkata; P Akbar Ali Khan; Bärbel Rohrer; Hiroko Hama
Journal:  Glia       Date:  2011-04-13       Impact factor: 7.452

5.  Defective FA2H leads to a novel form of neurodegeneration with brain iron accumulation (NBIA).

Authors:  Michael C Kruer; Coro Paisán-Ruiz; Nathalie Boddaert; Moon Y Yoon; Hiroko Hama; Allison Gregory; Alessandro Malandrini; Randall L Woltjer; Arnold Munnich; Stephanie Gobin; Brenda J Polster; Silvia Palmeri; Simon Edvardson; John Hardy; Henry Houlden; Susan J Hayflick
Journal:  Ann Neurol       Date:  2010-11       Impact factor: 10.422

6.  Absence of 2-hydroxylated sphingolipids is compatible with normal neural development but causes late-onset axon and myelin sheath degeneration.

Authors:  Inge Zöller; Marion Meixner; Dieter Hartmann; Heinrich Büssow; Rainer Meyer; Volkmar Gieselmann; Matthias Eckhardt
Journal:  J Neurosci       Date:  2008-09-24       Impact factor: 6.167

7.  The human FA2H gene encodes a fatty acid 2-hydroxylase.

Authors:  Nathan L Alderson; Barbara M Rembiesa; Michael D Walla; Alicja Bielawska; Jacek Bielawski; Hiroko Hama
Journal:  J Biol Chem       Date:  2004-08-27       Impact factor: 5.157

8.  A novel locus for an autosomal recessive hereditary spastic paraplegia (SPG35) maps to 16q21-q23.

Authors:  K J Dick; R Al-Mjeni; W Baskir; R Koul; M A Simpson; M A Patton; S Raeburn; A H Crosby
Journal:  Neurology       Date:  2008-05-07       Impact factor: 9.910

9.  Mutations in the fatty acid 2-hydroxylase gene are associated with leukodystrophy with spastic paraparesis and dystonia.

Authors:  Simon Edvardson; Hiroko Hama; Avraham Shaag; John Moshe Gomori; Itai Berger; Dov Soffer; Stanley H Korman; Ilana Taustein; Ann Saada; Orly Elpeleg
Journal:  Am J Hum Genet       Date:  2008-11       Impact factor: 11.025

10.  FA2H-related disorders: a novel c.270+3A>T splice-site mutation leads to a complex neurodegenerative phenotype.

Authors:  Caterina Garone; Tommaso Pippucci; Duccio M Cordelli; Roberta Zuntini; Giovanni Castegnaro; Caterina Marconi; Claudio Graziano; Valentina Marchiani; Alberto Verrotti; Marco Seri; Emilio Franzoni
Journal:  Dev Med Child Neurol       Date:  2011-05-18       Impact factor: 5.449

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  27 in total

1.  HapCompass: a fast cycle basis algorithm for accurate haplotype assembly of sequence data.

Authors:  Derek Aguiar; Sorin Istrail
Journal:  J Comput Biol       Date:  2012-06       Impact factor: 1.479

Review 2.  Hereditary Spastic Paraplegia: Clinical and Genetic Hallmarks.

Authors:  Paulo Victor Sgobbi de Souza; Wladimir Bocca Vieira de Rezende Pinto; Gabriel Novaes de Rezende Batistella; Thiago Bortholin; Acary Souza Bulle Oliveira
Journal:  Cerebellum       Date:  2017-04       Impact factor: 3.847

Review 3.  Overcoming the divide between ataxias and spastic paraplegias: Shared phenotypes, genes, and pathways.

Authors:  Matthis Synofzik; Rebecca Schüle
Journal:  Mov Disord       Date:  2017-02-14       Impact factor: 10.338

4.  Cerebral Iron Accumulation Is Not a Major Feature of FA2H/SPG35.

Authors:  Cecilia Marelli; Mustafa A Salih; Karine Nguyen; Martial Mallaret; Nicolas Leboucq; Hamdy H Hassan; Nathalie Drouot; Pierre Labauge; Michel Koenig
Journal:  Mov Disord Clin Pract       Date:  2015-02-18

5.  The Crystal Structure of an Integral Membrane Fatty Acid α-Hydroxylase.

Authors:  Guangyu Zhu; Mary Koszelak-Rosenblum; Sara M Connelly; Mark E Dumont; Michael G Malkowski
Journal:  J Biol Chem       Date:  2015-10-28       Impact factor: 5.157

Review 6.  Clinical and neuroimaging features of autosomal recessive spastic paraplegia 35 (SPG35): case reports, new mutations, and brief literature review.

Authors:  Francesco Mari; Beatrice Berti; Alessandro Romano; Jacopo Baldacci; Riccardo Rizzi; M Grazia Alessandrì; Alessandra Tessa; Elena Procopio; Anna Rubegni; Charles Marques Lourenḉo; Alessandro Simonati; Renzo Guerrini; Filippo Maria Santorelli
Journal:  Neurogenetics       Date:  2018-02-08       Impact factor: 2.660

Review 7.  Human genetic disorders of sphingolipid biosynthesis.

Authors:  Leonardo Astudillo; Frédérique Sabourdy; Nicole Therville; Heiko Bode; Bruno Ségui; Nathalie Andrieu-Abadie; Thorsten Hornemann; Thierry Levade
Journal:  J Inherit Metab Dis       Date:  2014-08-21       Impact factor: 4.982

8.  Novel SNP array analysis and exome sequencing detect a homozygous exon 7 deletion of MEGF10 causing early onset myopathy, areflexia, respiratory distress and dysphagia (EMARDD).

Authors:  Tyler Mark Pierson; Thomas Markello; John Accardi; Lynne Wolfe; David Adams; Murat Sincan; Noor M Tarazi; Karin Fuentes Fajardo; Praveen F Cherukuri; Ilda Bajraktari; Katy G Meilleur; Sandra Donkervoort; Mina Jain; Ying Hu; Tanya J Lehky; Pedro Cruz; James C Mullikin; Carsten Bonnemann; William A Gahl; Cornelius F Boerkoel; Cynthia J Tifft
Journal:  Neuromuscul Disord       Date:  2013-03-01       Impact factor: 4.296

Review 9.  The BEACH is hot: a LYST of emerging roles for BEACH-domain containing proteins in human disease.

Authors:  Andrew R Cullinane; Alejandro A Schäffer; Marjan Huizing
Journal:  Traffic       Date:  2013-04-24       Impact factor: 6.215

Review 10.  Excess iron harms the brain: the syndromes of neurodegeneration with brain iron accumulation (NBIA).

Authors:  Susanne A Schneider; Kailash P Bhatia
Journal:  J Neural Transm (Vienna)       Date:  2012-12-02       Impact factor: 3.575

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