Literature DB >> 24299166

A universe of dwarfs and giants: genome size and chromosome evolution in the monocot family Melanthiaceae.

Jaume Pellicer1, Laura J Kelly1,2, Ilia J Leitch1, Wendy B Zomlefer3, Michael F Fay1.   

Abstract

• Since the occurrence of giant genomes in angiosperms is restricted to just a few lineages, identifying where shifts towards genome obesity have occurred is essential for understanding the evolutionary mechanisms triggering this process. • Genome sizes were assessed using flow cytometry in 79 species and new chromosome numbers were obtained. Phylogenetically based statistical methods were applied to infer ancestral character reconstructions of chromosome numbers and nuclear DNA contents. • Melanthiaceae are the most diverse family in terms of genome size, with C-values ranging more than 230-fold. Our data confirmed that giant genomes are restricted to tribe Parideae, with most extant species in the family characterized by small genomes. Ancestral genome size reconstruction revealed that the most recent common ancestor (MRCA) for the family had a relatively small genome (1C = 5.37 pg). Chromosome losses and polyploidy are recovered as the main evolutionary mechanisms generating chromosome number change. • Genome evolution in Melanthiaceae has been characterized by a trend towards genome size reduction, with just one episode of dramatic DNA accumulation in Parideae. Such extreme contrasting profiles of genome size evolution illustrate the key role of transposable elements and chromosome rearrangements in driving the evolution of plant genomes.
© 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Entities:  

Keywords:  C-value; Liliales; Paris; Trillium; ancestral state; chromosomes; nuclear DNA content; polyploidy

Mesh:

Year:  2013        PMID: 24299166     DOI: 10.1111/nph.12617

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  24 in total

1.  The Application of Flow Cytometry for Estimating Genome Size, Ploidy Level Endopolyploidy, and Reproductive Modes in Plants.

Authors:  Jaume Pellicer; Robyn F Powell; Ilia J Leitch
Journal:  Methods Mol Biol       Date:  2021

2.  Cytogenetic comparison of heteromorphic and homomorphic sex chromosomes in Coccinia (Cucurbitaceae) points to sex chromosome turnover.

Authors:  Aretuza Sousa; Jörg Fuchs; Susanne S Renner
Journal:  Chromosome Res       Date:  2017-03-25       Impact factor: 5.239

Review 3.  Genetic features of Haliotis discus hannai by infection of vibrio and virus.

Authors:  Jennifer Im; Heui-Soo Kim
Journal:  Genes Genomics       Date:  2019-11-27       Impact factor: 1.839

4.  Mechanisms of karyotype evolution in the Brazilian scorpions of the subfamily Centruroidinae (Buthidae).

Authors:  Crislaine Vanessa Ubinski; Leonardo Sousa Carvalho; Marielle Cristina Schneider
Journal:  Genetica       Date:  2018-09-11       Impact factor: 1.082

5.  Cytotype diversity and genome size variation in Knautia (Caprifoliaceae, Dipsacoideae).

Authors:  Božo Frajman; Ivana Rešetnik; Hanna Weiss-Schneeweiss; Friedrich Ehrendorfer; Peter Schönswetter
Journal:  BMC Evol Biol       Date:  2015-07-17       Impact factor: 3.260

6.  Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size.

Authors:  Laura J Kelly; Simon Renny-Byfield; Jaume Pellicer; Jiří Macas; Petr Novák; Pavel Neumann; Martin A Lysak; Peter D Day; Madeleine Berger; Michael F Fay; Richard A Nichols; Andrew R Leitch; Ilia J Leitch
Journal:  New Phytol       Date:  2015-06-08       Impact factor: 10.151

7.  Detecting Mechanisms of Karyotype Evolution in Heterotaxis (Orchidaceae).

Authors:  Ana Paula Moraes; André Olmos Simões; Dario Isidro Ojeda Alayon; Fábio de Barros; Eliana Regina Forni-Martins
Journal:  PLoS One       Date:  2016-11-10       Impact factor: 3.240

8.  First karyotype description and nuclear 2C value for Myrsine (Primulaceae): comparing three species.

Authors:  Renata Flávia de Carvalho; Paulo Marcos Amaral-Silva; Micheli Sossai Spadeto; Andrei Caíque Pires Nunes; Tatiana Tavares Carrijo; Carlos Roberto Carvalho; Wellington Ronildo Clarindo
Journal:  Comp Cytogenet       Date:  2017-03-13       Impact factor: 1.800

9.  In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae.

Authors:  Jiří Macas; Petr Novák; Jaume Pellicer; Jana Čížková; Andrea Koblížková; Pavel Neumann; Iva Fuková; Jaroslav Doležel; Laura J Kelly; Ilia J Leitch
Journal:  PLoS One       Date:  2015-11-25       Impact factor: 3.240

10.  The Impact of Reconstruction Methods, Phylogenetic Uncertainty and Branch Lengths on Inference of Chromosome Number Evolution in American Daisies (Melampodium, Asteraceae).

Authors:  Jamie McCann; Gerald M Schneeweiss; Tod F Stuessy; Jose L Villaseñor; Hanna Weiss-Schneeweiss
Journal:  PLoS One       Date:  2016-09-09       Impact factor: 3.240

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