Literature DB >> 24292377

Re-interpretation of the evidence for the PVC cell plan supports a Gram-negative origin.

Damien P Devos1.   

Abstract

The PVC superphylum consists of the core phyla Planctomycetes, Verrucomicrobia and Chlamydiae, together with additional ones. Historically, the cell plan of PVC bacteria has been interpreted as an 'exception' to the classical Gram-negative (Gneg) one (Fuerst Antonie van Leeuwenhoek 104:451-466, 2013). However recent genomic and electron-microscopy data have argued against this exceptional status and suggested the need for a reinterpretation of the data in a more classical framework. In this perspective, I evaluate the arguments that have recently been presented by Fuerst as supporting the PVC cell plan as an 'exception' and present an alternative interpretation that is based on proposed evolutionary events that may have shaped the PVC genomes and proteomes. This interpretation supports the alternative proposal that the PVC cell plan is derived from a Gneg one.

Mesh:

Year:  2013        PMID: 24292377     DOI: 10.1007/s10482-013-0087-y

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  13 in total

Review 1.  Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria).

Authors:  Thomas Cavalier-Smith; Ema E-Yung Chao
Journal:  Protoplasma       Date:  2020-01-03       Impact factor: 3.356

2.  Cultivation and functional characterization of 79 planctomycetes uncovers their unique biology.

Authors:  Sandra Wiegand; Mareike Jogler; Christian Boedeker; Daniela Pinto; John Vollmers; Elena Rivas-Marín; Timo Kohn; Stijn H Peeters; Anja Heuer; Patrick Rast; Sonja Oberbeckmann; Boyke Bunk; Olga Jeske; Anke Meyerdierks; Julia E Storesund; Nicolai Kallscheuer; Sebastian Lücker; Olga M Lage; Thomas Pohl; Broder J Merkel; Peter Hornburger; Ralph-Walter Müller; Franz Brümmer; Matthias Labrenz; Alfred M Spormann; Huub J M Op den Camp; Jörg Overmann; Rudolf Amann; Mike S M Jetten; Thorsten Mascher; Marnix H Medema; Damien P Devos; Anne-Kristin Kaster; Lise Øvreås; Manfred Rohde; Michael Y Galperin; Christian Jogler
Journal:  Nat Microbiol       Date:  2019-11-18       Impact factor: 17.745

3.  Proteins Related to the Type I Secretion System Are Associated with Secondary SecA_DEAD Domain Proteins in Some Species of Planctomycetes, Verrucomicrobia, Proteobacteria, Nitrospirae and Chlorobi.

Authors:  Olga K Kamneva; Saroj Poudel; Naomi L Ward
Journal:  PLoS One       Date:  2015-06-01       Impact factor: 3.240

4.  Anammox Planctomycetes have a peptidoglycan cell wall.

Authors:  Muriel C F van Teeseling; Rob J Mesman; Erkin Kuru; Akbar Espaillat; Felipe Cava; Yves V Brun; Michael S VanNieuwenhze; Boran Kartal; Laura van Niftrik
Journal:  Nat Commun       Date:  2015-05-12       Impact factor: 14.919

5.  Structural studies of planctomycete Gemmata obscuriglobus support cell compartmentalisation in a bacterium.

Authors:  Evgeny Sagulenko; Garry P Morgan; Richard I Webb; Benjamin Yee; Kuo-Chang Lee; John A Fuerst
Journal:  PLoS One       Date:  2014-03-14       Impact factor: 3.240

6.  Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae.

Authors:  Carmen Scheuner; Brian J Tindall; Megan Lu; Matt Nolan; Alla Lapidus; Jan-Fang Cheng; Lynne Goodwin; Sam Pitluck; Marcel Huntemann; Konstantinos Liolios; Ioanna Pagani; Konstantinos Mavromatis; Natalia Ivanova; Amrita Pati; Amy Chen; Krishna Palaniappan; Cynthia D Jeffries; Loren Hauser; Miriam Land; Romano Mwirichia; Manfred Rohde; Birte Abt; John C Detter; Tanja Woyke; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Markus Göker; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2014-12-08

7.  The S-Layer Protein of the Anammox Bacterium Kuenenia stuttgartiensis Is Heavily O-Glycosylated.

Authors:  Muriel C F van Teeseling; Daniel Maresch; Cornelia B Rath; Rudolf Figl; Friedrich Altmann; Mike S M Jetten; Paul Messner; Christina Schäffer; Laura van Niftrik
Journal:  Front Microbiol       Date:  2016-11-01       Impact factor: 5.640

Review 8.  Evolutionary Cell Biology of Division Mode in the Bacterial Planctomycetes-Verrucomicrobia- Chlamydiae Superphylum.

Authors:  Elena Rivas-Marín; Inés Canosa; Damien P Devos
Journal:  Front Microbiol       Date:  2016-12-06       Impact factor: 5.640

9.  Nuclear Pore-Like Structures in a Compartmentalized Bacterium.

Authors:  Evgeny Sagulenko; Amanda Nouwens; Richard I Webb; Kathryn Green; Benjamin Yee; Garry Morgan; Andrew Leis; Kuo-Chang Lee; Margaret K Butler; Nicholas Chia; Uyen Thi Phuong Pham; Stinus Lindgreen; Ryan Catchpole; Anthony M Poole; John A Fuerst
Journal:  PLoS One       Date:  2017-02-01       Impact factor: 3.240

Review 10.  Determining the bacterial cell biology of Planctomycetes.

Authors:  Christian Boedeker; Margarete Schüler; Greta Reintjes; Olga Jeske; Muriel C F van Teeseling; Mareike Jogler; Patrick Rast; Daniela Borchert; Damien P Devos; Martin Kucklick; Miroslava Schaffer; Roberto Kolter; Laura van Niftrik; Susanne Engelmann; Rudolf Amann; Manfred Rohde; Harald Engelhardt; Christian Jogler
Journal:  Nat Commun       Date:  2017-04-10       Impact factor: 14.919

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