Literature DB >> 24291601

Comparative proteomics reveals association of early accumulated proteins in conferring butachlor tolerance in three N(2)-fixing Anabaena spp.

Chhavi Agrawal1, Sonia Sen1, Shilpi Singh1, Snigdha Rai1, Prashant Kumar Singh1, Vinay Kumar Singh2, L C Rai1.   

Abstract

Butachlor an extensively used rice field herbicide negatively affects the cyanobacterial proliferation, yet the molecular mechanism underlying its toxicity in diazotrophic cyanobacteria is largely unknown. The present study focuses on the comparative proteomics to decode the molecular basis of butachlor toxicity/tolerance in three Anabaena species e.g. Anabaena sp. PCC 7120, Anabaena doliolum and Anabaena L31. 75 differentially expressed proteins from each Anabaena sp. included those involved in photosynthesis, C, N and protein metabolism, redox homeostasis, and signal transduction. While early accumulated proteins related to photosynthesis (atpA, atpB), carbon metabolism (glpx, fba and prk), protein folding (groEL, PPIase), regulation (orrA) and other function (OR, akr) appeared crucial for tolerance of Anabaena L31, the late accumulated proteins in Anabaena 7120 presumably offer acclimation during prolonged exposure to butachlor. Contrary to the above, a multitude of down-accumulated proteins vis-a-vis metabolisms augment sensitivity of A. doliolum to butachlor. A cluster of high abundant proteins (atpA, groEL, OR, AGTase, Alr0803, Alr0806, Alr3090, Alr3199, All4050 and All4051) common across the three species may be taken as markers for butachlor tolerance and deserve exploitation for stress management and transgenic development. BIOLOGICAL SIGNIFICANCE: Cyanobacteria offer an eco-friendly alternative to chemical fertilizers for increasing productivity, especially in rice cultivation. This study is the first to compare the proteome of three diazotrophic cyanobacteria subjected to butachlor, a pre-emergent herbicide extensively used in rice paddy. Changes in protein dynamics over time along with physiological and biochemical attributes clearly provide a comprehensive overview on differential tolerance of Anabaena species to butachlor. Molecular docking further added a new dimension in identification of potential protein candidates for butachlor stress management in cyanobacteria. This study strongly recommends combined application of Anabaena spp. A. L31 and A. PCC7120 as biofertilizer in paddy fields undergoing butachlor treatment.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  2DE; Anabaena; Butachlor; Early and late accumulated proteins; MALDI–TOF MS/MS

Mesh:

Substances:

Year:  2013        PMID: 24291601     DOI: 10.1016/j.jprot.2013.11.015

Source DB:  PubMed          Journal:  J Proteomics        ISSN: 1874-3919            Impact factor:   4.044


  10 in total

1.  A Salt-Inducible Mn-Catalase (KatB) Protects Cyanobacterium from Oxidative Stress.

Authors:  Dhiman Chakravarty; Manisha Banerjee; Subhash C Bihani; Anand Ballal
Journal:  Plant Physiol       Date:  2015-12-08       Impact factor: 8.340

2.  Identification and functional characterization of four novel aldo/keto reductases in Anabaena sp. PCC 7120 by integrating wet lab with in silico approaches.

Authors:  Chhavi Agrawal; Shivam Yadav; Shweta Rai; Antra Chatterjee; Sonia Sen; Ruchi Rai; L C Rai
Journal:  Funct Integr Genomics       Date:  2017-02-11       Impact factor: 3.410

Review 3.  Proteomic approaches in research of cyanobacterial photosynthesis.

Authors:  Natalia Battchikova; Martina Angeleri; Eva-Mari Aro
Journal:  Photosynth Res       Date:  2014-10-31       Impact factor: 3.573

4.  Overexpression of phytochelatin synthase (pcs) enhances abiotic stress tolerance by altering the proteome of transformed Anabaena sp. PCC 7120.

Authors:  Neha Chaurasia; Yogesh Mishra; Antra Chatterjee; Ruchi Rai; Shivam Yadav; L C Rai
Journal:  Protoplasma       Date:  2016-12-20       Impact factor: 3.356

5.  A single gene all3940 (Dps) overexpression in Anabaena sp. PCC 7120 confers multiple abiotic stress tolerance via proteomic alterations.

Authors:  Om Prakash Narayan; Nidhi Kumari; Poonam Bhargava; Hema Rajaram; Lal Chand Rai
Journal:  Funct Integr Genomics       Date:  2015-10-05       Impact factor: 3.410

6.  Induction and differential expression of certain novel proteins in Anabaena L31 under UV-B radiation stress.

Authors:  Piyoosh K Babele; Garvita Singh; Ashok Kumar; Madhu B Tyagi
Journal:  Front Microbiol       Date:  2015-02-24       Impact factor: 5.640

7.  A Novel Aldo-Keto Reductase (AKR17A1) of Anabaena sp. PCC 7120 Degrades the Rice Field Herbicide Butachlor and Confers Tolerance to Abiotic Stresses in E. coli.

Authors:  Chhavi Agrawal; Sonia Sen; Shivam Yadav; Shweta Rai; Lal Chand Rai
Journal:  PLoS One       Date:  2015-09-15       Impact factor: 3.240

8.  Proteomic evidences for microcystin-RR-induced toxicological alterations in mice liver.

Authors:  Ashutosh Kumar Rai; Rupesh Chaturvedi; Ashok Kumar
Journal:  Sci Rep       Date:  2018-01-22       Impact factor: 4.379

9.  Transcriptomic analysis of cyanobacterial alkane overproduction reveals stress-related genes and inhibitors of lipid droplet formation.

Authors:  Daisy B Arias; Kevin A Gomez Pinto; Kerry K Cooper; Michael L Summers
Journal:  Microb Genom       Date:  2020-10

10.  UV-B Radiation Stress Causes Alterations in Whole Cell Protein Profile and Expression of Certain Genes in the Rice Phyllospheric Bacterium Enterobacter cloacae.

Authors:  Jay Kumar; Piyoosh K Babele; Divya Singh; Ashok Kumar
Journal:  Front Microbiol       Date:  2016-09-12       Impact factor: 5.640

  10 in total

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