Literature DB >> 24285637

Crowdsourcing natural products discovery to access uncharted dimensions of fungal metabolite diversity.

Lin Du1, Andrew J Robles, Jarrod B King, Douglas R Powell, Andrew N Miller, Susan L Mooberry, Robert H Cichewicz.   

Abstract

A fundamental component for success in drug discovery is the ability to assemble and screen compounds that encompass a broad swath of biologically relevant chemical-diversity space. Achieving this goal in a natural-products-based setting requires access to a wide range of biologically diverse specimens. For this reason, we introduced a crowdsourcing program in which citizen scientists furnish soil samples from which new microbial isolates are procured. Illustrating the strength of this approach, we obtained a unique fungal metabolite, maximiscin, from a crowdsourced Alaskan soil sample. n class="Chemical">Maximiscin, which exhibits a putative combination of polyketide synthase (PKS), non-ribosomal peptide synthetase (NRPS), and shikimate pathway components, was identified as an inhibitor of UACC-62 melanoma cells (LC50=0.93 μM). The metabolite also exhibited efficacy in a xenograft mouse model. These results underscore the value of building cooperative relationships between research teams and citizen scientists to enrich drug discovery efforts.
Copyright © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  antitumor agents; biosynthesis; crowdsourcing; drug discovery; epigenetics

Mesh:

Substances:

Year:  2013        PMID: 24285637      PMCID: PMC4028707          DOI: 10.1002/anie.201306549

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  21 in total

1.  Waikialoid A suppresses hyphal morphogenesis and inhibits biofilm development in pathogenic Candida albicans.

Authors:  Xiaoru Wang; Jianlan You; Jarrod B King; Douglas R Powell; Robert H Cichewicz
Journal:  J Nat Prod       Date:  2012-03-08       Impact factor: 4.050

Review 2.  The shikimate pathway--a metabolic tree with many branches.

Authors:  R Bentley
Journal:  Crit Rev Biochem Mol Biol       Date:  1990       Impact factor: 8.250

Review 3.  Secondary metabolites of fungi from marine habitats.

Authors:  Mostafa E Rateb; Rainer Ebel
Journal:  Nat Prod Rep       Date:  2011-01-12       Impact factor: 13.423

Review 4.  Natural products with antitumor activity from endophytic fungi.

Authors:  L-W Wang; Y-L Zhang; F-C Lin; Y-Z Hu; C-L Zhang
Journal:  Mini Rev Med Chem       Date:  2011-10       Impact factor: 3.862

Review 5.  Molecular diversity sculpted by fungal PKS-NRPS hybrids.

Authors:  Daniela Boettger; Christian Hertweck
Journal:  Chembiochem       Date:  2012-12-07       Impact factor: 3.164

6.  A crowdsourcing innovation challenge to locate and map automated external defibrillators.

Authors:  Raina M Merchant; David A Asch; John C Hershey; Heather M Griffis; Shawndra Hill; Olivia Saynisch; Alison C Leung; Jeremy M Asch; Kirk Lozada; Lindsay D Nadkarni; Austin Kilaru; Charles C Branas; Eric M Stone; Larry Starr; Frances Shofer; Graham Nichol; Lance B Becker
Journal:  Circ Cardiovasc Qual Outcomes       Date:  2013-03-12

7.  Citizen science: amateur experts.

Authors:  Trisha Gura
Journal:  Nature       Date:  2013-04-11       Impact factor: 49.962

Review 8.  Penicillin: the medicine with the greatest impact on therapeutic outcomes.

Authors:  Nelson Kardos; Arnold L Demain
Journal:  Appl Microbiol Biotechnol       Date:  2011-10-02       Impact factor: 4.813

Review 9.  Overcoming tumor multidrug resistance using drugs able to evade P-glycoprotein or to exploit its expression.

Authors:  Stefania Nobili; Ida Landini; Teresita Mazzei; Enrico Mini
Journal:  Med Res Rev       Date:  2011-03-03       Impact factor: 12.944

10.  Diarylcyclopentendione metabolite obtained from a Preussia typharum isolate procured using an unconventional cultivation approach.

Authors:  Lin Du; Jarrod B King; Brian H Morrow; Jana K Shen; Andrew N Miller; Robert H Cichewicz
Journal:  J Nat Prod       Date:  2012-10-09       Impact factor: 4.050

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  27 in total

Review 1.  Recent advances in natural product discovery.

Authors:  Yunzi Luo; Ryan E Cobb; Huimin Zhao
Journal:  Curr Opin Biotechnol       Date:  2014-09-26       Impact factor: 9.740

2.  Leveraging Peptaibol Biosynthetic Promiscuity for Next-Generation Antiplasmodial Therapeutics.

Authors:  Jin Woo Lee; Jennifer E Collins; Karen L Wendt; Debopam Chakrabarti; Robert H Cichewicz
Journal:  J Nat Prod       Date:  2021-02-10       Impact factor: 4.050

3.  Chemoreactive Natural Products that Afford Resistance Against Disparate Antibiotics and Toxins.

Authors:  Lin Du; Jianlan You; Kenneth M Nicholas; Robert H Cichewicz
Journal:  Angew Chem Int Ed Engl       Date:  2016-03-01       Impact factor: 15.336

Review 4.  Counting on natural products for drug design.

Authors:  Tiago Rodrigues; Daniel Reker; Petra Schneider; Gisbert Schneider
Journal:  Nat Chem       Date:  2016-04-25       Impact factor: 24.427

5.  Antibiotic discovery is a walk in the park.

Authors:  Louis-Félix Nothias; Rob Knight; Pieter C Dorrestein
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-09       Impact factor: 11.205

6.  Advanced Multidimensional Separations in Mass Spectrometry: Navigating the Big Data Deluge.

Authors:  Jody C May; John A McLean
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2016-03-30       Impact factor: 10.745

7.  Sclerotiamide: The First Non-Peptide-Based Natural Product Activator of Bacterial Caseinolytic Protease P.

Authors:  Nathan P Lavey; Jesse A Coker; Eliza A Ruben; Adam S Duerfeldt
Journal:  J Nat Prod       Date:  2016-03-11       Impact factor: 4.050

8.  Structure-Activity Relationships of New Natural Product-Based Diaryloxazoles with Selective Activity against Androgen Receptor-Positive Breast Cancer Cells.

Authors:  Andrew J Robles; Shelby McCowen; Shengxin Cai; Michaels Glassman; Francisco Ruiz; Robert H Cichewicz; Stanton F McHardy; Susan L Mooberry
Journal:  J Med Chem       Date:  2017-11-03       Impact factor: 7.446

9.  Leucinostatins from Ophiocordyceps spp. and Purpureocillium spp. Demonstrate Selective Antiproliferative Effects in Cells Representing the Luminal Androgen Receptor Subtype of Triple Negative Breast Cancer.

Authors:  Yun-Seo Kil; April L Risinger; Cora L Petersen; Susan L Mooberry; Robert H Cichewicz
Journal:  J Nat Prod       Date:  2020-06-08       Impact factor: 4.050

10.  Total Synthesis of (-)-Maximiscin.

Authors:  Kyle S McClymont; Feng-Yuan Wang; Amin Minakar; Phil S Baran
Journal:  J Am Chem Soc       Date:  2020-05-01       Impact factor: 15.419

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