Literature DB >> 24274753

RNA editing in plants and its evolution.

Mizuki Takenaka1, Anja Zehrmann, Daniil Verbitskiy, Barbara Härtel, Axel Brennicke.   

Abstract

RNA editing alters the identity of nucleotides in RNA molecules such that the information for a protein in the mRNA differs from the prediction of the genomic DNA. In chloroplasts and mitochondria of flowering plants, RNA editing changes C nucleotides to U nucleotides; in ferns and mosses, it also changes U to C. The approximately 500 editing sites in mitochondria and 40 editing sites in plastids of flowering plants are individually addressed by specific proteins, genes for which are amplified in plant species with organellar RNA editing. These proteins contain repeat elements that bind to cognate RNA sequence motifs just 5' to the edited nucleotide. In flowering plants, the site-specific proteins interact selectively with individual members of a different, smaller family of proteins. These latter proteins may be connectors between the site-specific proteins and the as yet unknown deaminating enzymatic activity.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24274753     DOI: 10.1146/annurev-genet-111212-133519

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  122 in total

1.  Dysfunctional mitochondria regulate the size of root apical meristem and leaf development in Arabidopsis.

Authors:  Wei-Yu Hsieh; Jo-Chien Liao; Ming-Hsiun Hsieh
Journal:  Plant Signal Behav       Date:  2015

Review 2.  High throughput sequencing revolution reveals conserved fundamentals of U-indel editing.

Authors:  Sara L Zimmer; Rachel M Simpson; Laurie K Read
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-06-11       Impact factor: 9.957

3.  Dysfunctional chloroplasts up-regulate the expression of mitochondrial genes in Arabidopsis seedlings.

Authors:  Jo-Chien Liao; Wei-Yu Hsieh; Ching-Chih Tseng; Ming-Hsiun Hsieh
Journal:  Photosynth Res       Date:  2015-05-26       Impact factor: 3.573

4.  YCF1: A Green TIC: Response to the de Vries et al. Commentary.

Authors:  Masato Nakai
Journal:  Plant Cell       Date:  2015-06-12       Impact factor: 11.277

Review 5.  Parallel Evolution and Lineage-Specific Expansion of RNA Editing in Ctenophores.

Authors:  Andrea B Kohn; Rachel S Sanford; Masa-aki Yoshida; Leonid L Moroz
Journal:  Integr Comp Biol       Date:  2015-06-18       Impact factor: 3.326

6.  Retention of functional genes for S19 ribosomal protein in both the mitochondrion and nucleus for over 60 million years.

Authors:  Sruthi Atluri; Sarah N Rampersad; Linda Bonen
Journal:  Mol Genet Genomics       Date:  2015-07-04       Impact factor: 3.291

7.  RNA editing implicated in chloroplast-to-nucleus communication.

Authors:  Robert M Larkin
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-07       Impact factor: 11.205

8.  RHON1 mediates a Rho-like activity for transcription termination in plastids of Arabidopsis thaliana.

Authors:  Wei Chi; Baoye He; Nikolay Manavski; Juan Mao; Daili Ji; Congming Lu; Jean David Rochaix; Jörg Meurer; Lixin Zhang
Journal:  Plant Cell       Date:  2014-12-05       Impact factor: 11.277

9.  The evolutionary conservation of rps3 introns and rps19-rps3-rpl16 gene cluster in Adiantum capillus-veneris mitochondria.

Authors:  Savino Bonavita; Teresa Maria Rosaria Regina
Journal:  Curr Genet       Date:  2015-08-18       Impact factor: 3.886

10.  Predictable alteration of sequence recognition by RNA editing factors from Arabidopsis.

Authors:  Peter Kindgren; Aaron Yap; Charles S Bond; Ian Small
Journal:  Plant Cell       Date:  2015-02-03       Impact factor: 11.277

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.