| Literature DB >> 24274037 |
Hai Lian, Ye Liu, Shoufeng Zhang, Fei Zhang, Rongliang Hu.
Abstract
We identified a novel mink orthoreovirus, MRV1HB-A, which seems to be closely related to human strain MRV2tou05, which was isolated from 2 children with acute necrotizing encephalopathy in 2005. Evolution of this virus should be closely monitored so that prevention and control measures can be taken should it become more virulent.Entities:
Keywords: China; Orthoreovirus; diarrhea; human; mink; reassortment; reovirus; swine
Mesh:
Year: 2013 PMID: 24274037 PMCID: PMC3840883 DOI: 10.3201/eid1912.130043
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Figure 1Electron micrograph of orthoreovirus MRV1-HB-A.
Figure 2Phylogenetic tree and network based on the nucleotide sequences of the small (S)1 and S3 segments of orthoreoviruses. A and B) Neighbor-joining tree of multiple orthoreovirus species. Numbers at nodes indicate bootstrap values based on 1,000 replicates. Scale bar indicates nucleotide substitutions per site. A) S1 segment; B) S3 segment. C and D) Bayesian phylogenetic tree of multiple orthoreovirus species. Numbers close to branches correspond to posterior probabilities. Branch lengths are proportional to the number of nucleotide substitutions. Scale bar indicates substitutions per aligned position. C) S1 segment; D) S3 segment. D and F) Phylogenetic network of multiple orthoreovirus species. The Neighbor-Net graph was computed by using the SplitsTree 4.13.1 software (http://ab.inf.uni-tuebingen.de/data/software/splitstree4/download/welcome.html). E) S1 segment ; F) S3 segment. MRV, mammalian orthoreovirus. Strains sequenced in this study are indicated in .
Nucleotide identities for segments of novel mink orthoreovirus MRV1HB-A, China*
| MRV1HB-A RNA segment | Reovirus prototype strain, % | Human reovirus strain MRV2tou05, % | Swine reovirus strain, % | ||||||
|---|---|---|---|---|---|---|---|---|---|
| T1L | T2J | T3D | T4N | Tou05 | SC-A | SHR-A | |||
| L1 | 89.5 | 75.8 | 89.5 | 90.2 |
| 96.9 | 91.3 | ||
| L2 | 86.5 | 73 | 77.2 | NA |
| 95.9 | 84.5 | ||
| L3 | 84.3 | 77.5 | 84.5 | NA |
| 96 | 85.6 | ||
| M1 | 94.9 | 70.2 | 94.4 | NA | 90 |
| 94.9 | ||
| M2 | 84.7 | 76.6 | 89.7 | 89.1 |
| 95.5 | 90.1 | ||
| M3 | 85.7 | 71.2 | 85.1 | NA |
| 96.6 | 85.5 | ||
| S1 |
| 58 | 40.6 | 42 | 58.6 | 40.9 | 73.3 | ||
| S2 |
| 77.2 | 85.4 | 85.6 | 84.7 | 85.9 | 92.7 | ||
| S3 | 90.7 | 74.4 | 85.5 | NA |
| 90 | 93.9 | ||
| S4 | 87.9 | 79.9 | 87.4 | 91.2 | 94.9 |
| 78.1 | ||
*T1L, type1 Lang; T2J, type 2 Jones; T3D, type3 Dearing; T4N, type 4 Ndelle; L, large segment; NA, not available; M, medium segment; S, small segment. Boldface indicates high sequence identity.
Responses of human and animal serum samples to novel mink orthoreovirus MRV1-HB-A, China
| Serum source, province | Hemagglutination inhibition, no. positive/no. tested (%) | Microneutralization, no. positive/no. tested (%) |
|---|---|---|
| Human | ||
| Hebei | 178/181 (98.3) | 161/172 (93.6) |
| Jilin | 116/128 (90.6) | 97/117 (82.9) |
| Swine | ||
| Hebei | 33/66 (50) | 27/59 (45.8) |
| Guangdong | 50/56 (89.3) | 44/52 (84.6) |
| Mink | ||
| Hebei | 48/48 (100) | 46/46 (100) |
| Jilin | 17/30 (56.7) | 15/28 (53.6) |