Literature DB >> 24273195

Altered methylation in tandem repeat element and elemental component levels in inhalable air particles.

Lifang Hou1, Xiao Zhang, Yinan Zheng, Sheng Wang, Chang Dou, Liqiong Guo, Hyang-Min Byun, Valeria Motta, John McCracken, Anaité Díaz, Choong-Min Kang, Petros Koutrakis, Pier Alberto Bertazzi, Jingyun Li, Joel Schwartz, Andrea A Baccarelli.   

Abstract

Exposure to particulate matter (PM) has been associated with lung cancer risk in epidemiology investigations. Elemental components of PM have been suggested to have critical roles in PM toxicity, but the molecular mechanisms underlying their association with cancer risks remain poorly understood. DNA methylation has emerged as a promising biomarker for environmental-related diseases, including lung cancer. In this study, we evaluated the effects of PM elemental components on methylation of three tandem repeats in a highly exposed population in Beijing, China. The Beijing Truck Driver Air Pollution Study was conducted shortly before the 2008 Beijing Olympic Games (June 15-July 27, 2008) and included 60 truck drivers and 60 office workers. On two days separated by 1-2 weeks, we measured blood DNA methylation of SATα, NBL2, D4Z4, and personal exposure to eight elemental components in PM2.5 , including aluminum (Al), silicon (Si), sulfur (S), potassium (K), calcium (Ca) titanium (Ti), iron (Fe), and zinc (Zn). We estimated the associations of individual elemental component with each tandem-repeat methylation in generalized estimating equations (GEE) models adjusted for PM2.5 mass and other covariates. Out of the eight examined elements, NBL2 methylation was positively associated with concentrations of Si [0.121, 95% confidence interval (CI): 0.030; 0.212, False Discovery Rate (FDR) = 0.047] and Ca (0.065, 95%CI: 0.014; 0.115, FDR = 0.047) in truck drivers. In office workers, SATα methylation was positively associated with concentrations of S (0.115, 95% CI: 0.034; 0.196, FDR = 0.042). PM-associated differences in blood tandem-repeat methylation may help detect biological effects of the exposure and identify individuals who may eventually experience higher lung cancer risk.
Copyright © 2013 Wiley Periodicals, Inc.

Entities:  

Keywords:  DNA methylation; lung cancer; tandem repeats

Mesh:

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Year:  2013        PMID: 24273195      PMCID: PMC4001244          DOI: 10.1002/em.21829

Source DB:  PubMed          Journal:  Environ Mol Mutagen        ISSN: 0893-6692            Impact factor:   3.216


  71 in total

1.  Lung function and surface electromyography of intercostal muscles in cement mill workers.

Authors:  Sultan A Meo; Muhammad A Azeem; Moinuddin G Ghori; Mirza M F Subhan
Journal:  Int J Occup Med Environ Health       Date:  2002       Impact factor: 1.843

2.  Modeling the association between particle constituents of air pollution and health outcomes.

Authors:  Elizabeth Mostofsky; Joel Schwartz; Brent A Coull; Petros Koutrakis; Gregory A Wellenius; Helen H Suh; Diane R Gold; Murray A Mittleman
Journal:  Am J Epidemiol       Date:  2012-07-31       Impact factor: 4.897

3.  Sulfate content correlates with iron concentrations in ambient air pollution particles.

Authors:  A J Ghio; J Stoneheurner; J K McGee; J S Kinsey
Journal:  Inhal Toxicol       Date:  1999-04       Impact factor: 2.724

4.  C-reactive protein and risk of lung cancer.

Authors:  Anil K Chaturvedi; Neil E Caporaso; Hormuzd A Katki; Hui-Lee Wong; Nilanjan Chatterjee; Sharon R Pine; Stephen J Chanock; James J Goedert; Eric A Engels
Journal:  J Clin Oncol       Date:  2010-04-26       Impact factor: 44.544

5.  Effects of 28 days silicon dioxide aerosol exposure on respiratory parameters, blood biochemical variables and lung histopathology in rats.

Authors:  Utsab Deb; Vinay Lomash; Suchita Raghuvanshi; S C Pant; R Vijayaraghavan
Journal:  Environ Toxicol Pharmacol       Date:  2012-07-31       Impact factor: 4.860

6.  A novel single molecule analysis of spontaneous and radiation-induced mutation at a mouse tandem repeat locus.

Authors:  Carole L Yauk; Yuri E Dubrova; Gemma R Grant; Alec J Jeffreys
Journal:  Mutat Res       Date:  2002-03-20       Impact factor: 2.433

7.  Cardiovascular mortality and long-term exposure to particulate air pollution: epidemiological evidence of general pathophysiological pathways of disease.

Authors:  C Arden Pope; Richard T Burnett; George D Thurston; Michael J Thun; Eugenia E Calle; Daniel Krewski; John J Godleski
Journal:  Circulation       Date:  2003-12-15       Impact factor: 29.690

8.  Association of short tandem repeat polymorphism in the promoter of prostate cancer antigen 3 gene with the risk of prostate cancer.

Authors:  Wu Zhou; Zhanguo Chen; Wangqiang Hu; Mo Shen; Xiaoxia Zhang; Chengdi Li; Zhiliang Wen; Xiuling Wu; Yuanping Hu; Xiaohua Zhang; Xiuzhi Duan; Xiucui Han; Zhihua Tao
Journal:  PLoS One       Date:  2011-05-31       Impact factor: 3.240

9.  Symptoms and medication use in children with asthma and traffic-related sources of fine particle pollution.

Authors:  Janneane F Gent; Petros Koutrakis; Kathleen Belanger; Elizabeth Triche; Theodore R Holford; Michael B Bracken; Brian P Leaderer
Journal:  Environ Health Perspect       Date:  2009-03-31       Impact factor: 9.031

10.  Epigenetics of a tandem DNA repeat: chromatin DNaseI sensitivity and opposite methylation changes in cancers.

Authors:  Koji Tsumagari; Lixin Qi; Kesmic Jackson; Chunbo Shao; Michelle Lacey; Janet Sowden; Rabi Tawil; Vettaikorumakankav Vedanarayanan; Melanie Ehrlich
Journal:  Nucleic Acids Res       Date:  2008-02-16       Impact factor: 16.971

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  26 in total

1.  Analysis of the Ambient Particulate Matter-induced Chromosomal Aberrations Using an In Vitro System.

Authors:  Isabelle R Miousse; Igor Koturbash; Marie-Cécile Chalbot; Martin Hauer-Jensen; Ilias Kavouras; Rupak Pathak
Journal:  J Vis Exp       Date:  2016-12-21       Impact factor: 1.355

2.  The Impact of Air Pollution on Our Epigenome: How Far Is the Evidence? (A Systematic Review).

Authors:  Rossella Alfano; Zdenko Herceg; Tim S Nawrot; Marc Chadeau-Hyam; Akram Ghantous; Michelle Plusquin
Journal:  Curr Environ Health Rep       Date:  2018-12

Review 3.  Environmental pollution and DNA methylation: carcinogenesis, clinical significance, and practical applications.

Authors:  Yi Cao
Journal:  Front Med       Date:  2015-08-19       Impact factor: 4.592

Review 4.  Function of PM2.5 in the pathogenesis of lung cancer and chronic airway inflammatory diseases.

Authors:  Ruyi Li; Rui Zhou; Jiange Zhang
Journal:  Oncol Lett       Date:  2018-03-26       Impact factor: 2.967

5.  Short-term effects of air temperature and mitochondrial DNA lesions within an older population.

Authors:  Cheng Peng; Marco Sanchez-Guerra; Ander Wilson; Amar J Mehta; Jia Zhong; Antonella Zanobetti; Kasey Brennan; Alexandra E Dereix; Brent A Coull; Pantel Vokonas; Joel Schwartz; Andrea A Baccarelli
Journal:  Environ Int       Date:  2017-03-27       Impact factor: 9.621

Review 6.  Current Methods and Challenges for Epidemiological Studies of the Associations Between Chemical Constituents of Particulate Matter and Health.

Authors:  Jenna R Krall; Howard H Chang; Stefanie Ebelt Sarnat; Roger D Peng; Lance A Waller
Journal:  Curr Environ Health Rep       Date:  2015-12

7.  Effects of short-term exposure to inhalable particulate matter on DNA methylation of tandem repeats.

Authors:  Liqiong Guo; Hyang-Min Byun; Jia Zhong; Valeria Motta; Jitendra Barupal; Yinan Zheng; Chang Dou; Feiruo Zhang; John P McCracken; Anaité Diaz; Sanchez-Guerra Marco; Silvia Colicino; Joel Schwartz; Sheng Wang; Lifang Hou; Andrea A Baccarelli
Journal:  Environ Mol Mutagen       Date:  2014-01-17       Impact factor: 3.216

8.  How The Genome Got a Life Span.

Authors:  Martine Lappé; Hannah Landecker
Journal:  New Genet Soc       Date:  2015-04-03

9.  PGS: a tool for association study of high-dimensional microRNA expression data with repeated measures.

Authors:  Yinan Zheng; Zhe Fei; Wei Zhang; Justin B Starren; Lei Liu; Andrea A Baccarelli; Yi Li; Lifang Hou
Journal:  Bioinformatics       Date:  2014-06-19       Impact factor: 6.937

10.  Histone 3 modifications and blood pressure in the Beijing Truck Driver Air Pollution Study.

Authors:  Jacob K Kresovich; Zhou Zhang; Fang Fang; Yinan Zheng; Marco Sanchez-Guerra; Brian T Joyce; Jia Zhong; Yana Chervona; Sheng Wang; Dou Chang; John P McCracken; Anaite Díaz; Matteo Bonzini; Michele Carugno; Petros Koutrakis; Choong-Min Kang; Shurui Bian; Tao Gao; Hyang-Min Byun; Joel Schwartz; Andrea A Baccarelli; Lifang Hou
Journal:  Biomarkers       Date:  2017-07-26       Impact factor: 2.658

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