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Literature DB >> 24270602

A quantitative liposome microarray to systematically characterize protein-lipid interactions.

Antoine-Emmanuel Saliba¹, Ivana Vonkova¹, Stefano Ceschia², Greg M Findlay³, Kenji Maeda², Christian Tischer⁴, Samy Deghou², Vera van Noort², Peer Bork², Tony Pawson⁵, Jan Ellenberg⁶, Anne-Claude Gavin².

Abstract

Lipids have a role in virtually all biological processes, acting as structural elements, scaffolds and signaling molecules, but they are still largely under-represented in known biological networks. Here we describe a liposome microarray-based assay (LiMA), a method that measures protein recruitment to membranes in a quantitative, automated, multiplexed and high-throughput manner.

Entities: Chemical Mutation

Mesh：

Substances：

Year: 2013 PMID： 24270602 DOI： 10.1038/nmeth.2734

Source DB: PubMed Journal: Nat Methods ISSN： 1548-7091 Impact factor: 28.547

24 in total

1. Global analysis of protein localization in budding yeast.

Authors: Won-Ki Huh; James V Falvo; Luke C Gerke; Adam S Carroll; Russell W Howson; Jonathan S Weissman; Erin K O'Shea
Journal: Nature Date: 2003-10-16 Impact factor: 49.962

Review 2. Liposomes: technologies and analytical applications.

Authors: Aldo Jesorka; Owe Orwar
Journal: Annu Rev Anal Chem (Palo Alto Calif) Date: 2008 Impact factor: 10.745

Review 3. Membrane recognition by phospholipid-binding domains.

Authors: Mark A Lemmon
Journal: Nat Rev Mol Cell Biol Date: 2008-02 Impact factor: 94.444

4. Interaction domains of Sos1/Grb2 are finely tuned for cooperative control of embryonic stem cell fate.

Authors: Greg M Findlay; Matthew J Smith; Fredrik Lanner; Marilyn S Hsiung; Gerald D Gish; Evangelia Petsalaki; Katie Cockburn; Tomonori Kaneko; Haiming Huang; Richard D Bagshaw; Troy Ketela; Monika Tucholska; Lorne Taylor; David D Bowtell; Jason Moffat; Mitsuhiko Ikura; Shawn S C Li; Sachdev S Sidhu; Janet Rossant; Tony Pawson
Journal: Cell Date: 2013-02-28 Impact factor: 41.582

5. Rapid Prototyping of Microfluidic Systems in Poly(dimethylsiloxane).

Authors: D C Duffy; J C McDonald; O J Schueller; G M Whitesides
Journal: Anal Chem Date: 1998-12-01 Impact factor: 6.986

6. Crystal structure and allosteric activation of protein kinase C βII.

Authors: Thomas A Leonard; Bartosz Różycki; Layla F Saidi; Gerhard Hummer; James H Hurley
Journal: Cell Date: 2011-01-07 Impact factor: 41.582

7. Allosteric gating of Son of sevenless activity by the histone domain.

Authors: Kamlesh K Yadav; Dafna Bar-Sagi
Journal: Proc Natl Acad Sci U S A Date: 2010-02-04 Impact factor: 11.205

8. Films of agarose enable rapid formation of giant liposomes in solutions of physiologic ionic strength.

Authors: Kim S Horger; Daniel J Estes; Ricardo Capone; Michael Mayer
Journal: J Am Chem Soc Date: 2009-02-11 Impact factor: 15.419

9. A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae.

Authors: Oriol Gallego; Matthew J Betts; Jelena Gvozdenovic-Jeremic; Kenji Maeda; Christian Matetzki; Carmen Aguilar-Gurrieri; Pedro Beltran-Alvarez; Stefan Bonn; Carlos Fernández-Tornero; Lars Juhl Jensen; Michael Kuhn; Jamie Trott; Vladimir Rybin; Christoph W Müller; Peer Bork; Marko Kaksonen; Robert B Russell; Anne-Claude Gavin
Journal: Mol Syst Biol Date: 2010-11-30 Impact factor: 11.429

10. CellProfiler: image analysis software for identifying and quantifying cell phenotypes.

Authors: Anne E Carpenter; Thouis R Jones; Michael R Lamprecht; Colin Clarke; In Han Kang; Ola Friman; David A Guertin; Joo Han Chang; Robert A Lindquist; Jason Moffat; Polina Golland; David M Sabatini
Journal: Genome Biol Date: 2006-10-31 Impact factor: 13.583

29 in total

A quantitative liposome microarray to systematically characterize protein-lipid interactions.

1. Global analysis of protein localization in budding yeast.

Review 2. Liposomes: technologies and analytical applications.

Review 3. Membrane recognition by phospholipid-binding domains.

4. Interaction domains of Sos1/Grb2 are finely tuned for cooperative control of embryonic stem cell fate.

5. Rapid Prototyping of Microfluidic Systems in Poly(dimethylsiloxane).

6. Crystal structure and allosteric activation of protein kinase C βII.

7. Allosteric gating of Son of sevenless activity by the histone domain.

8. Films of agarose enable rapid formation of giant liposomes in solutions of physiologic ionic strength.

9. A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae.

10. CellProfiler: image analysis software for identifying and quantifying cell phenotypes.

1. Trifunctional lipid probes for comprehensive studies of single lipid species in living cells.

2. ProLIF - quantitative integrin protein-protein interactions and synergistic membrane effects on proteoliposomes.

Review 3. Turning the spotlight on protein-lipid interactions in cells.

4. Giant unilamellar vesicles formed by hybrid films of agarose and lipids display altered mechanical properties.

5. PIP2 Reshapes Membranes through Asymmetric Desorption.

Review 6. Membrane protein reconstitution into giant unilamellar vesicles: a review on current techniques.

7. In situ vesicle formation by native chemical ligation.

8. Chemical biology: fats as research subjects.

9. PIP-on-a-chip: A Label-free Study of Protein-phosphoinositide Interactions.

Review 10. Systems medicine: evolution of systems biology from bench to bedside.