Literature DB >> 24270359

Minke whale genome and aquatic adaptation in cetaceans.

Hyung-Soon Yim1, Yun Sung Cho2, Xuanmin Guang3, Sung Gyun Kang4, Jae-Yeon Jeong4, Sun-Shin Cha5, Hyun-Myung Oh6, Jae-Hak Lee6, Eun Chan Yang6, Kae Kyoung Kwon4, Yun Jae Kim6, Tae Wan Kim6, Wonduck Kim6, Jeong Ho Jeon6, Sang-Jin Kim4, Dong Han Choi6, Sungwoong Jho7, Hak-Min Kim7, Junsu Ko8, Hyunmin Kim8, Young-Ah Shin7, Hyun-Ju Jung8, Yuan Zheng9, Zhuo Wang9, Yan Chen9, Ming Chen9, Awei Jiang9, Erli Li9, Shu Zhang9, Haolong Hou10, Tae Hyung Kim8, Lili Yu9, Sha Liu9, Kung Ahn8, Jesse Cooper8, Sin-Gi Park8, Chang Pyo Hong8, Wook Jin11, Heui-Soo Kim12, Chankyu Park13, Kyooyeol Lee13, Sung Chun14, Phillip A Morin15, Stephen J O'Brien16, Hang Lee17, Jumpei Kimura18, Dae Yeon Moon19, Andrea Manica20, Jeremy Edwards21, Byung Chul Kim7, Sangsoo Kim22, Jun Wang23, Jong Bhak24, Hyun Sook Lee4, Jung-Hyun Lee4.   

Abstract

The shift from terrestrial to aquatic life by whales was a substantial evolutionary event. Here we report the whole-genome sequencing and de novo assembly of the minke whale genome, as well as the whole-genome sequences of three minke whales, a fin whale, a bottlenose dolphin and a finless porpoise. Our comparative genomic analysis identified an expansion in the whale lineage of gene families associated with stress-responsive proteins and anaerobic metabolism, whereas gene families related to body hair and sensory receptors were contracted. Our analysis also identified whale-specific mutations in genes encoding antioxidants and enzymes controlling blood pressure and salt concentration. Overall the whale-genome sequences exhibited distinct features that are associated with the physiological and morphological changes needed for life in an aquatic environment, marked by resistance to physiological stresses caused by a lack of oxygen, increased amounts of reactive oxygen species and high salt levels.

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Year:  2013        PMID: 24270359      PMCID: PMC4079537          DOI: 10.1038/ng.2835

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  66 in total

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10.  Genome-wide scans for candidate genes involved in the aquatic adaptation of dolphins.

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Journal:  Genome Biol Evol       Date:  2013       Impact factor: 3.416

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10.  Hundreds of Genes Experienced Convergent Shifts in Selective Pressure in Marine Mammals.

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