Literature DB >> 24255114

Structures and interface mapping of the TIR domain-containing adaptor molecules involved in interferon signaling.

Yoshiaki Enokizono1, Hiroyuki Kumeta, Kenji Funami, Masataka Horiuchi, Joy Sarmiento, Kazuo Yamashita, Daron M Standley, Misako Matsumoto, Tsukasa Seya, Fuyuhiko Inagaki.   

Abstract

Homotypic and heterotypic interactions between Toll/interleukin-1 receptor (TIR) domains in Toll-like receptors (TLRs) and downstream adaptors are essential to evoke innate immune responses. However, such oligomerization properties present intrinsic difficulties in structural studies of TIR domains. Here, using BB-loop mutations that disrupt homotypic interactions, we determined the structures of the monomeric TIR domain-containing adaptor molecule (TICAM)-1 and TICAM-2 TIR domains. Docking of the monomeric structures, together with yeast two hybrid-based mutagenesis assays, reveals that the homotypic interaction between TICAM-2 TIR is indispensable to present a scaffold for recruiting the monomeric moiety of the TICAM-1 TIR dimer. This result proposes a unique idea that oligomerization of upstream TIR domains is crucial for binding of downstream TIR domains. Furthermore, the bivalent nature of each TIR domain dimer can generate a large signaling complex under the activated TLRs, which would recruit downstream signaling molecules efficiently. This model is consistent with previous reports that BB-loop mutants completely abrogate downstream signaling.

Entities:  

Keywords:  MyD88-independent pathway; TLR signaling; TRAM; TRIF; innate immunity

Mesh:

Substances:

Year:  2013        PMID: 24255114      PMCID: PMC3856793          DOI: 10.1073/pnas.1222811110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  Protein structure comparison using the markov transition model of evolution.

Authors:  T Kawabata; K Nishikawa
Journal:  Proteins       Date:  2000-10-01

2.  An extensively associated dimer in the structure of the C713S mutant of the TIR domain of human TLR2.

Authors:  Xiao Tao; Yingwu Xu; Ye Zheng; Amer A Beg; Liang Tong
Journal:  Biochem Biophys Res Commun       Date:  2002-11-29       Impact factor: 3.575

3.  MATRAS: A program for protein 3D structure comparison.

Authors:  Takeshi Kawabata
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

4.  The interleukin 1 (IL-1) receptor accessory protein Toll/IL-1 receptor domain: analysis of putative interaction sites in vitro mutagenesis and molecular modeling.

Authors:  Jurgen Radons; Stefan Dove; Detlef Neumann; Reinhold Altmann; Alexander Botzki; Michael U Martin; Werner Falk
Journal:  J Biol Chem       Date:  2003-09-17       Impact factor: 5.157

5.  Structural basis for signal transduction by the Toll/interleukin-1 receptor domains.

Authors:  Y Xu; X Tao; B Shen; T Horng; R Medzhitov; J L Manley; L Tong
Journal:  Nature       Date:  2000-11-02       Impact factor: 49.962

6.  TICAM-1, an adaptor molecule that participates in Toll-like receptor 3-mediated interferon-beta induction.

Authors:  Hiroyuki Oshiumi; Misako Matsumoto; Kenji Funami; Takashi Akazawa; Tsukasa Seya
Journal:  Nat Immunol       Date:  2003-01-21       Impact factor: 25.606

7.  TRAM is specifically involved in the Toll-like receptor 4-mediated MyD88-independent signaling pathway.

Authors:  Masahiro Yamamoto; Shintaro Sato; Hiroaki Hemmi; Satoshi Uematsu; Katsuaki Hoshino; Tsuneyasu Kaisho; Osamu Takeuchi; Kiyoshi Takeda; Shizuo Akira
Journal:  Nat Immunol       Date:  2003-10-12       Impact factor: 25.606

8.  Structural complementarity of Toll/interleukin-1 receptor domains in Toll-like receptors and the adaptors Mal and MyD88.

Authors:  Aisling Dunne; Mikael Ejdeback; Phumzile L Ludidi; Luke A J O'Neill; Nicholas J Gay
Journal:  J Biol Chem       Date:  2003-07-29       Impact factor: 5.157

9.  Lateral clustering of TLR3:dsRNA signaling units revealed by TLR3ecd:3Fabs quaternary structure.

Authors:  Jinquan Luo; Galina Obmolova; Thomas J Malia; Sheng-Jiun Wu; Karen E Duffy; James D Marion; Jessica K Bell; Peng Ge; Z Hong Zhou; Alexey Teplyakov; Yonghong Zhao; Roberta J Lamb; Jarrat L Jordan; Lani R San Mateo; Raymond W Sweet; Gary L Gilliland
Journal:  J Mol Biol       Date:  2012-05-09       Impact factor: 5.469

10.  LPS-TLR4 signaling to IRF-3/7 and NF-kappaB involves the toll adapters TRAM and TRIF.

Authors:  Katherine A Fitzgerald; Daniel C Rowe; Betsy J Barnes; Daniel R Caffrey; Alberto Visintin; Eicke Latz; Brian Monks; Paula M Pitha; Douglas T Golenbock
Journal:  J Exp Med       Date:  2003-09-29       Impact factor: 14.307

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  22 in total

1.  A Structural View of Negative Regulation of the Toll-like Receptor-Mediated Inflammatory Pathway.

Authors:  Emine Guven-Maiorov; Ozlem Keskin; Attila Gursoy; Ruth Nussinov
Journal:  Biophys J       Date:  2015-08-11       Impact factor: 4.033

2.  Activation of lymphoma-associated MyD88 mutations via allostery-induced TIR-domain oligomerization.

Authors:  Monika Avbelj; Olaf-Oliver Wolz; Ota Fekonja; Mojca Benčina; Matej Repič; Janez Mavri; Jens Krüger; Charlotta Schärfe; Magno Delmiro Garcia; Gabriela Panter; Oliver Kohlbacher; Alexander N R Weber; Roman Jerala
Journal:  Blood       Date:  2014-10-30       Impact factor: 22.113

Review 3.  Innate immune pattern recognition: a cell biological perspective.

Authors:  Sky W Brubaker; Kevin S Bonham; Ivan Zanoni; Jonathan C Kagan
Journal:  Annu Rev Immunol       Date:  2015-01-02       Impact factor: 28.527

Review 4.  Assembly and localization of Toll-like receptor signalling complexes.

Authors:  Nicholas J Gay; Martyn F Symmons; Monique Gangloff; Clare E Bryant
Journal:  Nat Rev Immunol       Date:  2014-08       Impact factor: 53.106

5.  The N-terminal domain of TIR domain-containing adaptor molecule-1, TICAM-1.

Authors:  Hiroyuki Kumeta; Hiromi Sakakibara; Yoshiaki Enokizono; Kenji Ogura; Masataka Horiuchi; Misako Matsumoto; Tsukasa Seya; Fuyuhiko Inagaki
Journal:  J Biomol NMR       Date:  2014-02-06       Impact factor: 2.835

6.  Structural basis of TIR-domain-assembly formation in MAL- and MyD88-dependent TLR4 signaling.

Authors:  Thomas Ve; Parimala R Vajjhala; Andrew Hedger; Tristan Croll; Frank DiMaio; Shane Horsefield; Xiong Yu; Peter Lavrencic; Zahid Hassan; Garry P Morgan; Ashley Mansell; Mehdi Mobli; Ailis O'Carroll; Brieuc Chauvin; Yann Gambin; Emma Sierecki; Michael J Landsberg; Katryn J Stacey; Edward H Egelman; Bostjan Kobe
Journal:  Nat Struct Mol Biol       Date:  2017-07-31       Impact factor: 15.369

Review 7.  Structural biology of innate immunity.

Authors:  Qian Yin; Tian-Min Fu; Jixi Li; Hao Wu
Journal:  Annu Rev Immunol       Date:  2015-01-22       Impact factor: 28.527

8.  A Decoy Peptide that Disrupts TIRAP Recruitment to TLRs Is Protective in a Murine Model of Influenza.

Authors:  Wenji Piao; Kari Ann Shirey; Lisa W Ru; Wendy Lai; Henryk Szmacinski; Greg A Snyder; Eric J Sundberg; Joseph R Lakowicz; Stefanie N Vogel; Vladimir Y Toshchakov
Journal:  Cell Rep       Date:  2015-06-18       Impact factor: 9.423

9.  Lipopolysaccharide Upregulates Palmitoylated Enzymes of the Phosphatidylinositol Cycle: An Insight from Proteomic Studies.

Authors:  Justyna Sobocińska; Paula Roszczenko-Jasińska; Monika Zaręba-Kozioł; Aneta Hromada-Judycka; Orest V Matveichuk; Gabriela Traczyk; Katarzyna Łukasiuk; Katarzyna Kwiatkowska
Journal:  Mol Cell Proteomics       Date:  2017-12-07       Impact factor: 5.911

10.  Structure of a prokaryotic SEFIR domain reveals two novel SEFIR-SEFIR interaction modes.

Authors:  Hui Yang; Yun Zhu; Xing Chen; Xiaoxia Li; Sheng Ye; Rongguang Zhang
Journal:  J Struct Biol       Date:  2018-03-14       Impact factor: 3.234

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