Literature DB >> 24253057

A FORTRAN program for analysis of genotypic frequencies and description of the breeding structure of populations.

W C Black1, E S Krafsur.   

Abstract

A FORTRAN program, "Genestats" was designed to analyse genotypic and allelic frequencies in subpopulations. The genotypes of individuals gathered from electrophoretic analysis at one or more loci are submitted. The program subsequently calculates allele frequencies, determines if significant heterogeneity exists among subpopulations, tests for departures from random mating in subpopulations and calculates F-statistics. A description of the statistical methods is provided. Printout from analysis of allozyme data collected from field subpopulations of the house fly (Musca domestica L.) is provided to illustrate and evaluate the computational methods.

Entities:  

Year:  1985        PMID: 24253057     DOI: 10.1007/BF00305980

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  5 in total

1.  The genetical structure of populations.

Authors:  S WRIGHT
Journal:  Ann Eugen       Date:  1951-03

2.  VARIANCE OF GENE FREQUENCIES.

Authors:  C Clark Cockerham
Journal:  Evolution       Date:  1969-03       Impact factor: 3.694

3.  ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE.

Authors:  B S Weir; C Clark Cockerham
Journal:  Evolution       Date:  1984-11       Impact factor: 3.694

4.  Population studies on southwestern Indian tribes. II. Local genetic differentiation in the Papago.

Authors:  P L Workman; J D Niswander
Journal:  Am J Hum Genet       Date:  1970-01       Impact factor: 11.025

5.  F-statistics and analysis of gene diversity in subdivided populations.

Authors:  M Nei
Journal:  Ann Hum Genet       Date:  1977-10       Impact factor: 1.670

  5 in total
  10 in total

1.  Genetic structure and linkage disequilibrium pattern of a rapeseed (Brassica napus L.) association mapping panel revealed by microsatellites.

Authors:  Yingjie Xiao; Dongfang Cai; Wei Yang; Wei Ye; Muhammad Younas; Jiangsheng Wu; Kede Liu
Journal:  Theor Appl Genet       Date:  2012-03-22       Impact factor: 5.699

2.  Allozyme variation in Anopheles stephensi Liston from Pakistan (Diptera: Culicidae).

Authors:  J W van Driel; J F Sluiters; H J van der Kaay
Journal:  Biochem Genet       Date:  1987-12       Impact factor: 1.890

3.  When genetic distance matters: measuring genetic differentiation at microsatellite loci in whole-genome scans of recent and incipient mosquito species.

Authors:  R Wang; L Zheng; Y T Touré; T Dandekar; F C Kafatos
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-11       Impact factor: 11.205

4.  A FORTRAN program for the calculation and analysis of two-locus linkage disequilibrium coefficients.

Authors:  W C Black; E S Krafsur
Journal:  Theor Appl Genet       Date:  1985-08       Impact factor: 5.699

5.  Determination of Knockdown Resistance (kdr) Allele Frequencies (T929I mutation) in Head Louse Populations from Mexico, Canada, and Peru.

Authors:  Gustavo Ponce-Garcia; Olga K Villanueva-Segura; Karina Garza-Elizondo; Heriberto M Villegas-Ramirez; Ildefonso Fernandez-Salas; Iram P Rodriguez-Sanchez; Felipe Dzul-Manzanilla; Adriana E Flores-Suarez
Journal:  Korean J Parasitol       Date:  2022-06-30       Impact factor: 1.776

6.  Isozyme marker loci associated with cold tolerance and maturity in maize.

Authors:  R A Guse; J G Coors; P N Drolsom; W F Tracy
Journal:  Theor Appl Genet       Date:  1988-09       Impact factor: 5.699

7.  Multilocus patterns of nucleotide diversity, population structure and linkage disequilibrium in Boechera stricta, a wild relative of Arabidopsis.

Authors:  Bao-Hua Song; Aaron J Windsor; Karl J Schmid; Sebastian Ramos-Onsins; M Eric Schranz; Andrew J Heidel; Thomas Mitchell-Olds
Journal:  Genetics       Date:  2008-12-22       Impact factor: 4.562

8.  Temporal and spatial trends in allozyme frequencies in house fly populations, Musca domestica L.

Authors:  W C Black; E S Krafsur
Journal:  Theor Appl Genet       Date:  1986-02       Impact factor: 5.699

9.  Presence of the knockdown resistance (kdr) mutations in the head lice (Pediculus humanus capitis) collected from primary school children of Thailand.

Authors:  Narisa Brownell; Sakone Sunantaraporn; Kobpat Phadungsaksawasdi; Nirin Seatamanoch; Switt Kongdachalert; Atchara Phumee; Padet Siriyasatien
Journal:  PLoS Negl Trop Dis       Date:  2020-12-16

10.  Recent rapid rise of a permethrin knock down resistance allele in Aedes aegypti in México.

Authors:  Gustavo Ponce García; Adriana E Flores; Ildefonso Fernández-Salas; Karla Saavedra-Rodríguez; Guadalupe Reyes-Solis; Saul Lozano-Fuentes; J Guillermo Bond; Mauricio Casas-Martínez; Janine M Ramsey; Julián García-Rejón; Marco Domínguez-Galera; Hilary Ranson; Janet Hemingway; Lars Eisen; William C Black IV
Journal:  PLoS Negl Trop Dis       Date:  2009-10-13
  10 in total

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