Literature DB >> 24248473

Crystal structure of the N-terminal ankyrin repeat domain of TRPV3 reveals unique conformation of finger 3 loop critical for channel function.

Di-Jing Shi1, Sheng Ye, Xu Cao, Rongguang Zhang, KeWei Wang.   

Abstract

In all six members of TRPV channel subfamily, there is an ankyrin repeat domain (ARD) in their intracellular N-termini. Ankyrin (ANK) repeat, a common motif with typically 33 residues in each repeat, is primarily involved in protein-protein interactions. Despite the sequence similarity among the ARDs of TRPV channels, the structure of TRPV3-ARD, however, remains unknown. Here, we report the crystal structure of TRPV3-ARD solved at 1.95 Å resolution, which reveals six-ankyrin repeats. While overall structure of TRPV3-ARD is similar to ARDs from other members of TRPV subfamily; it, however, features a noticeable finger 3 loop that bends over and is stabilized by a network of hydrogen bonds and hydrophobic packing, instead of being flexible as seen in known TRPV-ARD structures. Electrophysiological recordings demonstrated that mutating key residues R225, R226, Q255, and F249 of finger 3 loop altered the channel activities and pharmacology. Taken all together, our findings show that TRPV3-ARD with characteristic finger 3 loop likely plays an important role in channel function and pharmacology.

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Year:  2013        PMID: 24248473      PMCID: PMC4875401          DOI: 10.1007/s13238-013-3091-0

Source DB:  PubMed          Journal:  Protein Cell        ISSN: 1674-800X            Impact factor:   14.870


  38 in total

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Review 2.  TRP channels as cellular sensors.

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4.  Human TRPV4 channel splice variants revealed a key role of ankyrin domains in multimerization and trafficking.

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Journal:  J Biol Chem       Date:  2005-11-16       Impact factor: 5.157

5.  Differential regulation of TRPV1, TRPV3, and TRPV4 sensitivity through a conserved binding site on the ankyrin repeat domain.

Authors:  Christopher B Phelps; Ruiqi R Wang; Shelly S Choo; Rachelle Gaudet
Journal:  J Biol Chem       Date:  2009-10-28       Impact factor: 5.157

6.  Farnesyl pyrophosphate is a novel pain-producing molecule via specific activation of TRPV3.

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  17 in total

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Review 3.  Structural insights into the gating mechanisms of TRPV channels.

Authors:  Ruth A Pumroy; Edwin C Fluck; Tofayel Ahmed; Vera Y Moiseenkova-Bell
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4.  Decrypting the Heat Activation Mechanism of TRPV1 Channel by Molecular Dynamics Simulation.

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Journal:  Biophys J       Date:  2018-01-09       Impact factor: 4.033

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6.  Toward elucidating the heat activation mechanism of the TRPV1 channel gating by molecular dynamics simulation.

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Journal:  Proteins       Date:  2016-10-24

Review 7.  Structural biology of TRP channels.

Authors:  Ute A Hellmich; Rachelle Gaudet
Journal:  Handb Exp Pharmacol       Date:  2014

Review 8.  Application of amphipols for structure-functional analysis of TRP channels.

Authors:  Kevin W Huynh; Matthew R Cohen; Vera Y Moiseenkova-Bell
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9.  Structural mechanism of heat-induced opening of a temperature-sensitive TRP channel.

Authors:  Kirill D Nadezhdin; Arthur Neuberger; Yuri A Trofimov; Nikolay A Krylov; Viktor Sinica; Nikita Kupko; Viktorie Vlachova; Eleonora Zakharian; Roman G Efremov; Alexander I Sobolevsky
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10.  A combined coarse-grained and all-atom simulation of TRPV1 channel gating and heat activation.

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