Literature DB >> 24238872

Genetics of human gene expression.

Barbara E Stranger1, Towfique Raj.   

Abstract

A steadily growing number of studies have identified and characterized expression quantitative trait loci (eQTLs) in human cell-lines, primary cells, and tissues. This class of variation has been shown to play a role in complex traits, including disease. Here, we discuss how eQTLs have the potential to accelerate discovery of disease genes and functional mechanisms underlying complex traits. We discuss how context-specificity of eQTLs is being characterized at an unprecedented scale and breadth, and how this both informs on the intricacy of human genome function, and has important ramifications for elucidating function of genetic variants of interest, particularly for those contributing to disease.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 24238872     DOI: 10.1016/j.gde.2013.10.004

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  12 in total

1.  How Gene Networks Can Uncover Novel CVD Players.

Authors:  Laurence D Parnell; Patricia Casas-Agustench; Lakshmanan K Iyer; Jose M Ordovas
Journal:  Curr Cardiovasc Risk Rep       Date:  2014-01

2.  Systems biology and the analysis of genetic variation.

Authors:  Shamil R Sunyaev; Frederick P Roth
Journal:  Curr Opin Genet Dev       Date:  2013-11-28       Impact factor: 5.578

3.  DNA-protein π-interactions in nature: abundance, structure, composition and strength of contacts between aromatic amino acids and DNA nucleobases or deoxyribose sugar.

Authors:  Katie A Wilson; Jennifer L Kellie; Stacey D Wetmore
Journal:  Nucleic Acids Res       Date:  2014-04-17       Impact factor: 16.971

4.  Functional effects of variation in transcription factor binding highlight long-range gene regulation by epromoters.

Authors:  Joanna Mitchelmore; Nastasiya F Grinberg; Chris Wallace; Mikhail Spivakov
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

5.  Massively parallel quantification of the regulatory effects of noncoding genetic variation in a human cohort.

Authors:  Christopher M Vockley; Cong Guo; William H Majoros; Michael Nodzenski; Denise M Scholtens; M Geoffrey Hayes; William L Lowe; Timothy E Reddy
Journal:  Genome Res       Date:  2015-06-17       Impact factor: 9.043

6.  CardioGxE, a catalog of gene-environment interactions for cardiometabolic traits.

Authors:  Laurence D Parnell; Britt A Blokker; Hassan S Dashti; Paula-Dene Nesbeth; Brittany Elle Cooper; Yiyi Ma; Yu-Chi Lee; Ruixue Hou; Chao-Qiang Lai; Kris Richardson; José M Ordovás
Journal:  BioData Min       Date:  2014-10-26       Impact factor: 2.522

7.  Genetic modifiers of neurofibromatosis type 1-associated café-au-lait macule count identified using multi-platform analysis.

Authors:  Alexander Pemov; Heejong Sung; Paula L Hyland; Jennifer L Sloan; Sarah L Ruppert; Andrea M Baldwin; Joseph F Boland; Sara E Bass; Hyo Jung Lee; Kristine M Jones; Xijun Zhang; James C Mullikin; Brigitte C Widemann; Alexander F Wilson; Douglas R Stewart
Journal:  PLoS Genet       Date:  2014-10-16       Impact factor: 5.917

8.  Risk alleles of genes with monoallelic expression are enriched in gain-of-function variants and depleted in loss-of-function variants for neurodevelopmental disorders.

Authors:  V Savova; S Vinogradova; D Pruss; A A Gimelbrant; L A Weiss
Journal:  Mol Psychiatry       Date:  2017-03-07       Impact factor: 15.992

9.  Reasoning over genetic variance information in cause-and-effect models of neurodegenerative diseases.

Authors:  Mufassra Naz; Alpha Tom Kodamullil; Martin Hofmann-Apitius
Journal:  Brief Bioinform       Date:  2015-08-05       Impact factor: 11.622

10.  Cytokines mapping for tissue-specific expression, eQTLs and GWAS traits.

Authors:  Lyubov E Salnikova; Maryam B Khadzhieva; Dmitry S Kolobkov; Alesya S Gracheva; Artem N Kuzovlev; Serikbay K Abilev
Journal:  Sci Rep       Date:  2020-09-07       Impact factor: 4.379

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