Literature DB >> 24213377

Nuclear lamins: making contacts with promoters.

Eivind Lund1, Philippe Collas1.   

Abstract

The nuclear lamina guards the genome and in many ways contributes to regulating nuclear function. Increasing evidence indicates that the lamina dynamically interacts with chromatin mainly through large repressive domains, and recent data suggest that at least some of the lamin-genome contacts may be developmentally significant. In an attempt to provide an additional meaning to lamin-genome contacts, a recent study characterized the association of gene promoters with A-type lamins in progenitor and differentiated cells. Here, we discuss how A-type lamins interact with spatially defined promoter regions, and the relationship between these interactions, associated chromatin marks and gene expression outputs. We discuss the impact of A-type lamins on nucleus-wide and local chromatin organization. We also address how lamin-promoter interactions are redistributed during differentiation of adipocyte progenitors into adipocytes. Finally, we propose a model of lineage-specific "unlocking" of developmentally regulated loci and its significance in cellular differentiation.

Keywords:  chromatin; differentiation; lamin A/C; lamina-associated domain; nuclear lamina; promoter

Mesh:

Substances:

Year:  2013        PMID: 24213377      PMCID: PMC3925686          DOI: 10.4161/nucl.26865

Source DB:  PubMed          Journal:  Nucleus        ISSN: 1949-1034            Impact factor:   4.197


  55 in total

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Journal:  Mol Biol Cell       Date:  2005-01-05       Impact factor: 4.138

2.  The nuclear-envelope protein and transcriptional repressor LAP2beta interacts with HDAC3 at the nuclear periphery, and induces histone H4 deacetylation.

Authors:  Raz Somech; Sigal Shaklai; Orit Geller; Ninette Amariglio; Amos J Simon; Gideon Rechavi; Einav Nili Gal-Yam
Journal:  J Cell Sci       Date:  2005-09-01       Impact factor: 5.285

Review 3.  Nucleosome destabilization in the epigenetic regulation of gene expression.

Authors:  Steven Henikoff
Journal:  Nat Rev Genet       Date:  2008-01       Impact factor: 53.242

4.  Characterization of the Drosophila melanogaster genome at the nuclear lamina.

Authors:  Helen Pickersgill; Bernike Kalverda; Elzo de Wit; Wendy Talhout; Maarten Fornerod; Bas van Steensel
Journal:  Nat Genet       Date:  2006-07-30       Impact factor: 38.330

5.  Nuclear lamina heterogeneity in mammalian cells. Differential expression of the major lamins and variations in lamin B phosphorylation.

Authors:  H J Worman; I Lazaridis; S D Georgatos
Journal:  J Biol Chem       Date:  1988-08-25       Impact factor: 5.157

6.  The truncated prelamin A in Hutchinson-Gilford progeria syndrome alters segregation of A-type and B-type lamin homopolymers.

Authors:  Erwan Delbarre; Marc Tramier; Maïté Coppey-Moisan; Claire Gaillard; Jean-Claude Courvalin; Brigitte Buendia
Journal:  Hum Mol Genet       Date:  2006-02-15       Impact factor: 6.150

7.  Primary structure analysis and lamin B and DNA binding of human LBR, an integral protein of the nuclear envelope inner membrane.

Authors:  Q Ye; H J Worman
Journal:  J Biol Chem       Date:  1994-04-15       Impact factor: 5.157

8.  Genome-wide maps of chromatin state in pluripotent and lineage-committed cells.

Authors:  Tarjei S Mikkelsen; Manching Ku; David B Jaffe; Biju Issac; Erez Lieberman; Georgia Giannoukos; Pablo Alvarez; William Brockman; Tae-Kyung Kim; Richard P Koche; William Lee; Eric Mendenhall; Aisling O'Donovan; Aviva Presser; Carsten Russ; Xiaohui Xie; Alexander Meissner; Marius Wernig; Rudolf Jaenisch; Chad Nusbaum; Eric S Lander; Bradley E Bernstein
Journal:  Nature       Date:  2007-07-01       Impact factor: 49.962

9.  Interphase nuclei of many mammalian cell types contain deep, dynamic, tubular membrane-bound invaginations of the nuclear envelope.

Authors:  M Fricker; M Hollinshead; N White; D Vaux
Journal:  J Cell Biol       Date:  1997-02-10       Impact factor: 10.539

10.  Lamin A/C and emerin regulate MKL1-SRF activity by modulating actin dynamics.

Authors:  Chin Yee Ho; Diana E Jaalouk; Maria K Vartiainen; Jan Lammerding
Journal:  Nature       Date:  2013-05-05       Impact factor: 49.962

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  12 in total

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Authors:  Eivind Lund; Anja R Oldenburg; Philippe Collas
Journal:  Nucleic Acids Res       Date:  2014-04-29       Impact factor: 16.971

Review 2.  Post-Translational Modification of Lamins: Mechanisms and Functions.

Authors:  Mingyue Zheng; Guoxiang Jin; Zhongjun Zhou
Journal:  Front Cell Dev Biol       Date:  2022-05-17

3.  LAP2alpha maintains a mobile and low assembly state of A-type lamins in the nuclear interior.

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Journal:  Elife       Date:  2021-02-19       Impact factor: 8.140

4.  Endogenous RGS14 is a cytoplasmic-nuclear shuttling protein that localizes to juxtanuclear membranes and chromatin-rich regions of the nucleus.

Authors:  Mary Rose Branch; John R Hepler
Journal:  PLoS One       Date:  2017-09-21       Impact factor: 3.240

5.  Association of lamin A/C with muscle gene-specific promoters in myoblasts.

Authors:  Fathima Athar; Veena K Parnaik
Journal:  Biochem Biophys Rep       Date:  2015-08-29

6.  Lamin A/C augments Th1 differentiation and response against vaccinia virus and Leishmania major.

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Journal:  Cell Death Dis       Date:  2018-01-08       Impact factor: 8.469

Review 7.  Laminopathy-causing lamin A mutations reconfigure lamina-associated domains and local spatial chromatin conformation.

Authors:  Nolwenn Briand; Philippe Collas
Journal:  Nucleus       Date:  2018-01-01       Impact factor: 4.197

8.  The importance of the nuclear positioning of the PPARG gene for its expression during porcine in vitro adipogenesis.

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Journal:  Chromosome Res       Date:  2019-01-17       Impact factor: 5.239

9.  Altered modulation of lamin A/C-HDAC2 interaction and p21 expression during oxidative stress response in HGPS.

Authors:  Elisabetta Mattioli; Davide Andrenacci; Cecilia Garofalo; Sabino Prencipe; Katia Scotlandi; Daniel Remondini; Davide Gentilini; Anna Maria Di Blasio; Sergio Valente; Emanuela Scarano; Lucia Cicchilitti; Giulia Piaggio; Antonello Mai; Giovanna Lattanzi
Journal:  Aging Cell       Date:  2018-08-15       Impact factor: 9.304

Review 10.  Lamin A/C and the Immune System: One Intermediate Filament, Many Faces.

Authors:  Angela Saez; Beatriz Herrero-Fernandez; Raquel Gomez-Bris; Beatriz Somovilla-Crespo; Cristina Rius; Jose M Gonzalez-Granado
Journal:  Int J Mol Sci       Date:  2020-08-25       Impact factor: 5.923

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